==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIFREEZE PROTEIN 24-JAN-99 9AME . COMPND 2 MOLECULE: PROTEIN (ANTIFREEZE PROTEIN TYPE III); . SOURCE 2 ORGANISM_SCIENTIFIC: MACROZOARCES AMERICANUS; . AUTHOR S.P.GRAETHER,C.I.DELUCA,J.BAARDSNES,G.A.HILL,P.L.DAVIES, . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3681.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 38 57.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 22.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 18.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 5 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A A 0 0 151 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -85.9 18.9 26.0 30.7 2 1 A N + 0 0 71 2,-0.1 2,-0.6 25,-0.0 25,-0.0 -0.335 360.0 151.2-121.2 47.4 18.2 25.4 27.0 3 2 A Q - 0 0 108 -2,-0.1 25,-0.4 25,-0.1 2,-0.3 -0.690 40.4-145.5 -72.1 118.8 21.1 23.5 25.4 4 3 A A - 0 0 26 -2,-0.6 31,-2.6 23,-0.2 32,-0.3 -0.744 13.9-160.1 -91.5 144.0 19.2 21.8 22.6 5 4 A S E -AB 26 34A 0 21,-3.0 21,-2.3 -2,-0.3 2,-0.5 -0.702 29.3 -92.7-116.5 164.5 20.1 18.3 21.5 6 5 A V E -A 25 0A 0 27,-2.2 50,-3.1 50,-0.3 2,-0.4 -0.720 44.0-171.6 -78.7 126.4 19.4 16.2 18.3 7 6 A V E -AC 24 55A 0 17,-2.2 17,-2.9 -2,-0.5 2,-0.3 -0.937 31.4-103.4-120.6 140.9 16.2 14.1 18.7 8 7 A A E -A 23 0A 1 46,-2.7 45,-2.6 -2,-0.4 15,-0.2 -0.471 24.7-165.3 -67.6 122.4 15.1 11.4 16.2 9 8 A N S S+ 0 0 66 13,-3.0 2,-0.3 -2,-0.3 14,-0.2 0.492 77.4 6.7 -87.2 -3.6 12.2 12.8 14.2 10 9 A Q S S- 0 0 75 12,-0.6 2,-0.3 41,-0.1 43,-0.1 -0.948 103.1 -69.1-162.7 167.8 11.4 9.3 13.0 11 10 A L - 0 0 91 -2,-0.3 -2,-0.0 41,-0.1 38,-0.0 -0.546 48.1-152.8 -63.3 125.8 12.5 5.7 13.8 12 11 A I B -D 50 0B 0 38,-2.6 38,-2.9 -2,-0.3 3,-0.1 -0.956 15.5-134.6-105.8 110.3 16.0 5.6 12.4 13 12 A P > - 0 0 65 0, 0.0 3,-2.0 0, 0.0 33,-0.3 -0.206 36.2 -78.9 -59.1 151.2 16.8 1.9 11.4 14 13 A I T 3 S+ 0 0 102 1,-0.3 33,-0.2 33,-0.1 35,-0.1 -0.248 116.5 11.1 -53.4 136.6 20.1 0.3 12.5 15 14 A N T 3 S+ 0 0 82 31,-1.8 -1,-0.3 1,-0.2 2,-0.2 0.527 87.8 148.6 67.8 11.1 22.9 1.3 10.1 16 15 A T < - 0 0 35 -3,-2.0 30,-1.9 29,-0.1 2,-0.5 -0.498 51.1-123.8 -68.0 139.1 21.0 4.1 8.4 17 16 A A B -E 45 0C 47 28,-0.2 28,-0.3 -2,-0.2 27,-0.1 -0.776 39.5-111.3 -77.6 126.3 23.1 7.1 7.1 18 17 A L - 0 0 1 26,-3.0 25,-2.9 -2,-0.5 2,-0.3 -0.368 35.8-169.8 -63.6 131.9 21.4 10.1 8.8 19 18 A T > - 0 0 59 23,-0.2 3,-1.7 24,-0.1 4,-0.4 -0.832 37.1-104.4-116.4 165.5 19.5 12.6 6.5 20 19 A L G > S+ 0 0 115 -2,-0.3 3,-1.5 1,-0.3 -1,-0.0 0.851 115.7 62.9 -58.3 -35.6 18.2 16.0 7.5 21 20 A V G 3 S+ 0 0 88 1,-0.3 -1,-0.3 -12,-0.0 -3,-0.0 0.720 98.7 58.8 -62.8 -19.8 14.5 14.8 7.7 22 21 A M G < S+ 0 0 20 -3,-1.7 -13,-3.0 1,-0.1 -12,-0.6 0.610 95.0 70.6 -87.5 -10.5 15.5 12.5 10.5 23 22 A M E < +A 8 0A 15 -3,-1.5 -15,-0.2 -4,-0.4 2,-0.2 -0.921 51.6 173.4-121.5 117.8 16.8 15.0 13.0 24 23 A R E -A 7 0A 87 -17,-2.9 -17,-2.2 -2,-0.5 2,-0.5 -0.600 28.8-120.9-107.8 176.2 14.8 17.6 15.0 25 24 A S E +A 6 0A 69 -19,-0.2 2,-0.3 -2,-0.2 -19,-0.2 -0.959 38.3 156.7-122.1 131.4 16.2 19.9 17.8 26 25 A E E -A 5 0A 78 -21,-2.3 -21,-3.0 -2,-0.5 2,-0.9 -0.997 47.1-113.8-153.6 150.9 14.8 19.9 21.3 27 26 A V + 0 0 83 -2,-0.3 2,-0.3 -23,-0.3 -23,-0.2 -0.772 55.2 159.6 -86.2 106.9 15.7 20.8 24.8 28 27 A V - 0 0 28 -2,-0.9 4,-0.1 -25,-0.4 -25,-0.1 -0.890 36.6-103.6-126.1 164.2 15.8 17.4 26.5 29 28 A T S S+ 0 0 137 -2,-0.3 2,-0.2 2,-0.1 26,-0.0 -0.998 102.6 42.1-131.6 127.7 17.4 15.9 29.7 30 29 A P S S- 0 0 91 0, 0.0 2,-0.3 0, 0.0 -2,-0.1 0.595 101.3-123.8 -62.4 161.4 19.9 14.1 29.6 31 30 A V - 0 0 72 -2,-0.2 -2,-0.1 1,-0.1 -27,-0.1 -0.631 34.8-178.4 -79.5 139.0 21.6 16.3 27.0 32 31 A G - 0 0 9 1,-0.3 25,-0.2 -2,-0.3 -1,-0.1 -0.037 49.4 -21.3-111.5-146.4 22.8 14.5 23.8 33 32 A I S S- 0 0 0 23,-2.8 -27,-2.2 -27,-0.3 -1,-0.3 -0.521 83.1-102.4 -63.8 131.1 24.6 15.6 20.6 34 33 A P B > -B 5 0A 27 0, 0.0 3,-2.1 0, 0.0 -29,-0.3 -0.285 20.2-126.7 -59.4 139.0 24.2 19.5 20.4 35 34 A A G > S+ 0 0 18 -31,-2.6 3,-1.9 1,-0.3 -30,-0.1 0.809 106.4 71.7 -58.7 -25.2 21.6 20.5 17.8 36 35 A E G 3 S+ 0 0 161 -32,-0.3 -1,-0.3 1,-0.3 4,-0.2 0.719 90.9 62.7 -59.5 -22.8 24.3 22.8 16.2 37 36 A D G X> + 0 0 15 -3,-2.1 4,-1.7 1,-0.2 3,-0.6 0.443 65.7 104.7 -85.8 0.2 25.9 19.6 14.9 38 37 A I H <> S+ 0 0 25 -3,-1.9 4,-1.1 1,-0.2 3,-0.2 0.866 78.7 56.3 -51.0 -43.3 23.1 18.3 12.7 39 38 A P H >4 S+ 0 0 95 0, 0.0 3,-0.6 0, 0.0 -1,-0.2 0.907 108.2 46.7 -48.0 -48.6 25.0 19.4 9.5 40 39 A R H <4 S+ 0 0 111 -3,-0.6 -2,-0.2 1,-0.2 -3,-0.1 0.823 105.9 61.5 -67.6 -32.0 28.0 17.3 10.5 41 40 A L H >< S+ 0 0 0 -4,-1.7 3,-2.6 -3,-0.2 -23,-0.4 0.776 76.2 110.2 -68.7 -26.5 25.7 14.3 11.3 42 41 A V T << S+ 0 0 68 -4,-1.1 -23,-0.2 -3,-0.6 3,-0.1 -0.242 87.5 13.2 -54.3 127.7 24.4 14.1 7.7 43 42 A G T 3 S+ 0 0 51 -25,-2.9 -1,-0.3 1,-0.3 2,-0.2 0.345 97.4 123.5 86.2 -5.5 25.6 10.9 6.0 44 43 A M < - 0 0 35 -3,-2.6 -26,-3.0 -26,-0.2 2,-0.4 -0.617 59.6-120.6 -88.6 146.9 26.9 9.4 9.3 45 44 A Q B -E 17 0C 77 17,-0.4 17,-3.0 -28,-0.3 2,-0.3 -0.703 10.0-133.7 -92.9 144.0 25.6 5.9 10.3 46 45 A V B -F 61 0D 0 -30,-1.9 -31,-1.8 -2,-0.4 15,-0.2 -0.641 8.7-152.6 -87.5 137.4 23.7 5.0 13.4 47 46 A N S S+ 0 0 58 13,-2.5 2,-0.3 -2,-0.3 14,-0.1 0.378 77.7 27.4 -97.8 9.3 25.0 1.8 15.1 48 47 A R S S- 0 0 101 12,-0.3 -33,-0.2 -35,-0.1 2,-0.2 -0.945 99.4 -84.8-155.7 159.4 21.7 0.7 16.8 49 48 A A - 0 0 56 -2,-0.3 -2,-0.1 -35,-0.1 -38,-0.0 -0.543 42.4-151.3 -68.3 139.3 18.0 1.4 15.9 50 49 A V B -D 12 0B 1 -38,-2.9 -38,-2.6 -2,-0.2 -40,-0.1 -0.938 11.0-138.6-118.6 108.6 16.9 4.8 17.3 51 50 A P > - 0 0 71 0, 0.0 3,-2.1 0, 0.0 -43,-0.3 -0.257 35.2 -83.3 -61.0 151.4 13.2 5.0 18.2 52 51 A L T 3 S+ 0 0 109 1,-0.3 -43,-0.2 -43,-0.1 -41,-0.1 -0.249 118.5 23.2 -50.8 137.9 11.2 8.2 17.3 53 52 A G T 3 S+ 0 0 37 -45,-2.6 -1,-0.3 1,-0.3 2,-0.2 0.384 90.9 135.2 84.0 -7.0 11.6 10.8 20.1 54 53 A T < - 0 0 47 -3,-2.1 -46,-2.7 1,-0.1 2,-0.4 -0.530 58.6-119.4 -77.8 145.5 15.0 9.4 21.3 55 54 A T B -C 7 0A 23 -48,-0.2 2,-0.6 -2,-0.2 -48,-0.3 -0.651 27.1-123.0 -79.6 130.7 17.9 11.7 22.0 56 55 A L - 0 0 0 -50,-3.1 -23,-2.8 -2,-0.4 -50,-0.3 -0.684 30.9-161.6 -79.1 119.1 20.9 11.0 19.8 57 56 A M > - 0 0 42 -2,-0.6 3,-2.1 -25,-0.2 4,-0.5 -0.684 29.3-110.1 -96.6 155.4 23.9 10.3 22.0 58 57 A P G > S+ 0 0 63 0, 0.0 3,-1.1 0, 0.0 6,-0.3 0.872 116.9 56.1 -53.6 -38.6 27.6 10.5 20.9 59 58 A D G 3 S+ 0 0 96 1,-0.2 -12,-0.0 3,-0.0 -3,-0.0 0.564 96.1 65.7 -73.2 -7.7 28.0 6.7 21.2 60 59 A M G < S+ 0 0 21 -3,-2.1 -13,-2.5 -14,-0.1 2,-0.6 0.603 90.3 73.2 -86.9 -14.5 25.1 6.0 18.8 61 60 A V B X S-F 46 0D 7 -3,-1.1 3,-1.7 -4,-0.5 2,-0.2 -0.865 79.5-132.0-112.6 120.9 26.8 7.5 15.8 62 61 A K T 3 S+ 0 0 88 -17,-3.0 -17,-0.4 -2,-0.6 3,-0.1 -0.480 94.7 12.0 -68.0 127.6 29.7 5.7 14.0 63 62 A G T 3 S+ 0 0 77 1,-0.3 2,-0.4 -2,-0.2 -1,-0.3 0.460 89.9 144.2 86.7 -2.2 32.5 8.1 13.4 64 63 A Y < + 0 0 32 -3,-1.7 2,-0.3 -6,-0.3 -1,-0.3 -0.575 12.0 155.6 -76.1 129.3 31.1 10.9 15.7 65 64 A A 0 0 69 -2,-0.4 -3,-0.0 -3,-0.1 0, 0.0 -0.967 360.0 360.0-147.3 132.3 33.7 12.8 17.6 66 65 A A 0 0 128 -2,-0.3 -1,-0.0 -33,-0.0 -33,-0.0 0.250 360.0 360.0-130.5 360.0 33.2 16.3 18.9