==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA-BINDING PROTEIN 14-JUL-97 1AOY . COMPND 2 MOLECULE: ARGININE REPRESSOR; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR M.SUNNERHAGEN,M.NILGES,G.OTTING . 78 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5842.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 44 56.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 6.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 6.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 27 34.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 234 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 73.3 -27.8 8.5 8.1 2 2 A R - 0 0 218 2,-0.0 2,-0.9 0, 0.0 0, 0.0 -0.864 360.0-175.9-145.5 103.9 -26.2 6.0 5.6 3 3 A S + 0 0 127 -2,-0.3 2,-0.6 2,-0.1 0, 0.0 -0.709 21.6 159.9-102.3 77.0 -24.2 3.1 6.8 4 4 A S - 0 0 49 -2,-0.9 2,-1.8 1,-0.0 -2,-0.0 -0.909 38.9-137.6-104.2 117.4 -22.9 1.6 3.6 5 5 A A + 0 0 113 -2,-0.6 2,-0.2 2,-0.1 -2,-0.1 -0.546 39.9 167.4 -75.3 82.7 -19.8 -0.7 3.9 6 6 A K - 0 0 127 -2,-1.8 2,-0.5 1,-0.0 3,-0.3 -0.553 51.2-102.1 -93.0 165.1 -17.9 0.5 0.8 7 7 A Q S > S+ 0 0 106 1,-0.2 4,-0.6 -2,-0.2 3,-0.1 0.035 84.0 118.4 -81.9 37.4 -14.2 -0.2 0.0 8 8 A E T 4 S+ 0 0 112 -2,-0.5 4,-0.4 1,-0.2 -1,-0.2 0.304 71.3 61.0 -80.7 10.0 -13.1 3.2 1.2 9 9 A E T > S+ 0 0 99 -3,-0.3 4,-2.8 2,-0.2 5,-0.3 0.806 90.4 60.1-101.9 -44.7 -11.1 1.3 3.8 10 10 A L H > S+ 0 0 2 1,-0.2 4,-1.7 2,-0.2 -2,-0.2 0.777 107.8 51.7 -55.6 -24.3 -8.7 -0.7 1.6 11 11 A V H X S+ 0 0 29 -4,-0.6 4,-2.1 2,-0.2 -1,-0.2 0.889 110.0 43.8 -81.0 -44.1 -7.6 2.7 0.3 12 12 A K H > S+ 0 0 114 -4,-0.4 4,-2.3 -3,-0.2 -2,-0.2 0.958 117.8 47.6 -66.5 -42.3 -6.8 4.3 3.7 13 13 A A H X S+ 0 0 3 -4,-2.8 4,-2.9 2,-0.2 5,-0.2 0.935 111.7 50.1 -59.4 -50.8 -5.1 1.1 4.8 14 14 A F H X S+ 0 0 0 -4,-1.7 4,-2.0 -5,-0.3 5,-0.2 0.960 113.9 42.9 -54.1 -60.7 -3.1 0.8 1.5 15 15 A K H X S+ 0 0 32 -4,-2.1 4,-2.3 1,-0.2 -1,-0.2 0.857 115.7 50.8 -54.5 -41.3 -1.7 4.4 1.6 16 16 A A H X S+ 0 0 45 -4,-2.3 4,-1.5 -5,-0.2 -1,-0.2 0.952 106.9 52.3 -63.5 -51.5 -1.0 4.2 5.4 17 17 A L H < S+ 0 0 4 -4,-2.9 4,-0.4 1,-0.2 6,-0.4 0.897 113.8 44.3 -50.8 -48.2 0.9 0.8 5.1 18 18 A L H >< S+ 0 0 0 -4,-2.0 3,-1.9 1,-0.2 -1,-0.2 0.940 109.9 54.0 -63.6 -48.9 3.2 2.3 2.4 19 19 A K H 3< S+ 0 0 90 -4,-2.3 -1,-0.2 1,-0.3 -2,-0.2 0.712 97.8 65.9 -63.2 -19.1 3.7 5.7 4.2 20 20 A E T 3< S- 0 0 128 -4,-1.5 -1,-0.3 -3,-0.3 -2,-0.2 0.725 102.2-136.2 -72.5 -21.9 4.9 3.7 7.3 21 21 A E < + 0 0 85 -3,-1.9 40,-0.1 -4,-0.4 -3,-0.1 0.998 69.4 108.1 61.5 72.7 8.0 2.5 5.3 22 22 A K + 0 0 130 45,-0.4 2,-0.4 -5,-0.4 -4,-0.1 0.500 48.6 84.9-140.3 -41.9 8.1 -1.2 6.2 23 23 A F - 0 0 15 -6,-0.4 44,-2.9 44,-0.3 -1,-0.2 -0.609 46.2-174.8 -80.6 127.4 7.0 -3.3 3.2 24 24 A S + 0 0 48 -2,-0.4 2,-0.3 42,-0.3 -1,-0.1 0.362 67.2 19.0-103.0 2.6 9.7 -4.0 0.6 25 25 A S S > S- 0 0 49 1,-0.2 4,-1.2 42,-0.1 5,-0.1 -0.962 79.1-102.2-160.2 172.2 7.5 -5.8 -2.0 26 26 A Q H >> S+ 0 0 59 -2,-0.3 4,-2.4 1,-0.2 3,-0.9 0.992 118.0 52.1 -65.0 -59.5 3.9 -6.3 -3.2 27 27 A G H 3> S+ 0 0 39 1,-0.3 4,-1.9 2,-0.2 -1,-0.2 0.742 104.6 60.5 -49.1 -28.6 3.4 -9.7 -1.6 28 28 A E H 3> S+ 0 0 68 2,-0.2 4,-1.8 1,-0.2 -1,-0.3 0.941 111.1 36.5 -66.6 -48.9 4.5 -8.2 1.7 29 29 A I H X S+ 0 0 20 -4,-1.8 4,-1.6 1,-0.2 3,-0.7 0.916 103.0 49.0 -54.3 -49.5 -0.3 -7.4 5.7 33 33 A L H 3X>S+ 0 0 0 -4,-2.2 4,-2.3 1,-0.2 5,-1.8 0.798 103.9 61.1 -65.7 -25.6 -3.8 -6.2 4.7 34 34 A Q H 3<5S+ 0 0 91 -4,-0.9 -1,-0.2 -3,-0.4 -2,-0.2 0.874 108.0 44.3 -67.3 -32.8 -5.1 -9.8 5.2 35 35 A E H <<5S+ 0 0 176 -4,-1.3 -2,-0.2 -3,-0.7 -1,-0.2 0.808 110.1 56.7 -77.6 -31.8 -4.1 -9.5 8.9 36 36 A Q H <5S- 0 0 106 -4,-1.6 -2,-0.2 -5,-0.2 -1,-0.2 0.922 131.7 -80.7 -64.9 -48.9 -5.6 -5.9 9.1 37 37 A G T <5S+ 0 0 55 -4,-2.3 2,-0.5 1,-0.1 -3,-0.2 0.482 89.1 119.1 148.1 36.2 -9.0 -7.0 8.0 38 38 A F < + 0 0 29 -5,-1.8 3,-0.2 1,-0.1 -1,-0.1 -0.911 24.0 171.9-129.5 105.9 -9.2 -7.4 4.2 39 39 A D S S+ 0 0 151 -2,-0.5 -1,-0.1 1,-0.2 2,-0.1 0.184 73.6 74.3 -94.9 16.2 -10.1 -10.9 2.7 40 40 A N S S+ 0 0 94 2,-0.0 2,-0.3 5,-0.0 -1,-0.2 -0.512 74.5 106.2-124.3 57.5 -10.4 -9.4 -0.7 41 41 A I + 0 0 11 -3,-0.2 2,-0.3 -2,-0.1 -3,-0.0 -1.000 32.7 154.3-142.2 139.7 -6.7 -8.8 -1.5 42 42 A N > - 0 0 83 -2,-0.3 4,-2.2 1,-0.0 5,-0.2 -0.896 58.4 -83.2-150.9 177.8 -4.1 -10.5 -3.8 43 43 A Q H > S+ 0 0 136 -2,-0.3 4,-2.5 1,-0.2 5,-0.2 0.867 128.3 50.0 -57.0 -38.0 -0.8 -9.9 -5.7 44 44 A S H > S+ 0 0 71 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.904 109.7 50.4 -68.5 -40.4 -2.8 -8.4 -8.6 45 45 A K H > S+ 0 0 60 2,-0.2 4,-2.1 1,-0.2 -2,-0.2 0.882 115.1 43.5 -63.3 -40.5 -4.8 -6.1 -6.3 46 46 A V H X S+ 0 0 0 -4,-2.2 4,-2.1 2,-0.2 -2,-0.2 0.890 115.1 47.0 -75.3 -40.3 -1.6 -4.8 -4.6 47 47 A S H X S+ 0 0 30 -4,-2.5 4,-1.8 -5,-0.2 -2,-0.2 0.875 114.6 48.9 -69.1 -34.8 0.3 -4.4 -7.9 48 48 A R H X S+ 0 0 161 -4,-2.4 4,-3.0 -5,-0.2 -2,-0.2 0.922 111.5 48.2 -69.6 -43.1 -2.7 -2.6 -9.4 49 49 A M H X S+ 0 0 27 -4,-2.1 4,-3.1 2,-0.2 5,-0.4 0.870 108.9 54.6 -66.7 -34.7 -3.1 -0.3 -6.4 50 50 A L H X>S+ 0 0 11 -4,-2.1 4,-1.9 2,-0.2 5,-1.8 0.941 115.7 37.8 -62.4 -47.0 0.7 0.5 -6.5 51 51 A T H <5S+ 0 0 124 -4,-1.8 -2,-0.2 3,-0.2 -1,-0.2 0.893 119.4 49.3 -71.0 -40.3 0.4 1.6 -10.1 52 52 A K H <5S+ 0 0 134 -4,-3.0 -2,-0.2 1,-0.2 -3,-0.2 0.964 120.2 34.1 -63.2 -56.2 -3.0 3.3 -9.6 53 53 A F H <5S- 0 0 4 -4,-3.1 -2,-0.2 -5,-0.2 -1,-0.2 0.824 108.8-126.4 -70.8 -32.8 -2.0 5.3 -6.5 54 54 A G T <5 - 0 0 25 -4,-1.9 -3,-0.2 -5,-0.4 -4,-0.1 0.942 36.6-177.2 85.3 54.9 1.5 5.8 -7.8 55 55 A A < - 0 0 21 -5,-1.8 2,-0.3 14,-0.1 14,-0.2 -0.390 12.1-142.3 -80.0 162.9 3.8 4.6 -5.0 56 56 A V E -A 68 0A 59 12,-2.5 12,-3.1 -2,-0.1 2,-0.6 -0.951 10.1-128.1-130.0 146.1 7.6 4.8 -5.0 57 57 A R E +A 67 0A 135 -2,-0.3 2,-0.3 10,-0.2 10,-0.2 -0.850 43.9 160.8 -93.7 115.6 10.4 2.4 -3.8 58 58 A T E -A 66 0A 50 8,-2.9 8,-2.5 -2,-0.6 2,-0.4 -0.937 45.0 -96.0-136.3 160.7 12.9 4.4 -1.7 59 59 A R E -A 65 0A 176 -2,-0.3 6,-0.2 6,-0.3 5,-0.0 -0.595 42.9-155.9 -76.6 125.7 15.6 3.9 0.9 60 60 A N > - 0 0 26 4,-1.8 3,-2.0 -2,-0.4 -1,-0.1 0.006 45.0 -62.7 -86.5-162.3 14.3 4.3 4.5 61 61 A A T 3 S+ 0 0 100 1,-0.3 -2,-0.1 -40,-0.1 -40,-0.0 0.843 139.2 40.4 -54.4 -38.1 16.1 5.2 7.8 62 62 A K T 3 S- 0 0 161 2,-0.1 -1,-0.3 0, 0.0 3,-0.1 0.061 121.7-102.3-102.2 25.7 18.2 2.0 7.6 63 63 A M S < S+ 0 0 145 -3,-2.0 2,-0.4 1,-0.2 -2,-0.1 0.606 71.5 150.8 68.4 12.7 18.8 2.2 3.8 64 64 A E - 0 0 117 1,-0.1 -4,-1.8 -5,-0.0 2,-1.4 -0.664 51.0-126.2 -81.0 125.3 16.2 -0.5 3.1 65 65 A M E +A 59 0A 92 -2,-0.4 2,-0.3 -6,-0.2 -6,-0.3 -0.580 50.4 157.8 -73.4 91.9 14.6 -0.2 -0.3 66 66 A V E -A 58 0A 1 -8,-2.5 -8,-2.9 -2,-1.4 2,-0.3 -0.772 46.1 -93.3-117.4 163.0 10.9 -0.2 0.7 67 67 A Y E +A 57 0A 30 -44,-2.9 -45,-0.4 -2,-0.3 -46,-0.4 -0.590 50.1 163.7 -75.6 131.5 7.6 1.1 -0.8 68 68 A C E -A 56 0A 14 -12,-3.1 -12,-2.5 -2,-0.3 -49,-0.2 -0.829 35.3-106.6-138.5 175.5 6.5 4.6 0.3 69 69 A L - 0 0 18 -2,-0.3 -14,-0.1 -14,-0.2 3,-0.1 -0.934 24.7-154.5-113.4 129.3 4.0 7.2 -0.9 70 70 A P - 0 0 51 0, 0.0 3,-0.2 0, 0.0 -1,-0.1 0.271 56.6 -27.0 -73.7-154.4 5.0 10.5 -2.6 71 71 A A S S- 0 0 78 1,-0.2 2,-0.0 0, 0.0 0, 0.0 -0.113 100.2 -56.5 -56.2 159.1 3.0 13.8 -2.5 72 72 A E S S+ 0 0 157 -3,-0.1 2,-0.3 1,-0.0 -1,-0.2 -0.138 77.0 153.4 -45.8 106.1 -0.8 13.5 -2.1 73 73 A L + 0 0 94 -3,-0.2 -1,-0.0 1,-0.2 0, 0.0 -0.946 46.8 37.2-144.9 116.3 -2.0 11.2 -4.9 74 74 A G - 0 0 17 -2,-0.3 -1,-0.2 1,-0.1 -59,-0.1 0.816 64.6-166.3 108.2 57.2 -5.1 9.0 -4.9 75 75 A V - 0 0 118 -3,-0.1 3,-0.4 1,-0.1 2,-0.3 -0.514 32.6-104.5 -73.5 134.5 -7.9 10.8 -3.1 76 76 A P S S+ 0 0 83 0, 0.0 -1,-0.1 0, 0.0 -68,-0.1 -0.449 81.6 104.8 -63.5 120.4 -10.9 8.6 -2.1 77 77 A T 0 0 117 -2,-0.3 -69,-0.0 -3,-0.0 -2,-0.0 0.296 360.0 360.0-164.8 -37.4 -13.8 9.4 -4.5 78 78 A T 0 0 188 -3,-0.4 -3,-0.0 0, 0.0 0, 0.0 -0.862 360.0 360.0-140.3 360.0 -14.2 6.5 -7.1