==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 14-OCT-93 1APC . COMPND 2 MOLECULE: CYTOCHROME B562; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR A.J.WAND,Y.FENG,S.G.SLIGAR . 106 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8478.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 85 80.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 19 17.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 58 54.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 96 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 120.6 3.8 15.1 -2.7 2 2 A D + 0 0 80 102,-0.1 2,-3.0 103,-0.0 3,-0.3 -0.336 360.0 0.3-142.4-133.6 5.5 11.7 -3.0 3 3 A L S > S+ 0 0 32 1,-0.3 4,-1.7 -2,-0.1 5,-0.4 0.390 73.5 162.2 -49.2 20.1 4.7 8.3 -4.6 4 4 A E H > + 0 0 86 -2,-3.0 4,-1.5 1,-0.2 -1,-0.3 0.708 65.4 69.8 -19.9 -16.0 1.6 10.3 -5.5 5 5 A D H >> S+ 0 0 87 -3,-0.3 4,-1.4 2,-0.2 3,-0.7 0.963 106.2 25.3 -73.5 -81.2 1.4 7.4 -7.9 6 6 A N H 3> S+ 0 0 14 1,-0.3 4,-0.7 -3,-0.2 -2,-0.2 0.805 122.8 61.4 -54.6 -23.7 0.7 4.3 -5.8 7 7 A M H >X S+ 0 0 95 -4,-1.7 4,-2.5 2,-0.2 3,-0.6 0.931 95.2 57.9 -70.5 -43.0 -0.9 6.9 -3.4 8 8 A E H X S+ 0 0 125 -4,-1.7 3,-1.9 -5,-0.3 4,-0.6 0.976 112.6 48.3 -78.9 -64.2 -11.3 5.3 1.8 16 16 A V H 3X S+ 0 0 74 -4,-2.2 4,-0.7 1,-0.3 -2,-0.2 0.690 106.0 67.6 -51.2 -10.6 -13.5 2.2 1.2 17 17 A I H 3< S+ 0 0 51 -4,-1.5 -1,-0.3 -5,-0.2 -2,-0.2 0.892 90.5 59.4 -78.8 -38.9 -11.5 0.9 4.1 18 18 A E H << S+ 0 0 170 -3,-1.9 -2,-0.2 -4,-0.8 -3,-0.1 0.973 122.0 21.3 -51.9 -77.8 -13.0 3.3 6.6 19 19 A K H < S+ 0 0 187 -4,-0.6 3,-0.3 2,-0.1 -1,-0.2 0.845 123.9 71.2 -61.8 -30.3 -16.6 2.2 6.3 20 20 A A < + 0 0 10 -4,-0.7 3,-0.0 -5,-0.4 4,-0.0 -0.459 49.4 110.0 -83.5 160.1 -15.4 -1.1 4.9 21 21 A D + 0 0 49 -2,-0.1 -1,-0.2 0, 0.0 67,-0.1 0.055 42.5 110.4 164.2 -35.8 -13.7 -3.7 7.1 22 22 A N S S- 0 0 116 -3,-0.3 4,-0.4 4,-0.1 5,-0.3 0.277 87.4 -87.4 -46.2-168.4 -16.1 -6.7 7.5 23 23 A A S > S+ 0 0 47 3,-0.2 4,-1.8 2,-0.1 5,-0.2 0.989 126.7 34.7 -73.3 -62.6 -15.0 -9.9 5.7 24 24 A A H > S+ 0 0 75 2,-0.2 4,-2.5 3,-0.2 5,-0.2 0.974 125.1 45.0 -56.7 -53.8 -16.6 -9.3 2.3 25 25 A Q H >> S+ 0 0 42 2,-0.2 3,-2.5 1,-0.2 4,-2.1 0.950 117.9 38.3 -52.3 -87.7 -15.9 -5.6 2.5 26 26 A V H 3> S+ 0 0 20 -4,-0.4 4,-2.3 1,-0.3 -1,-0.2 0.807 114.4 62.7 -34.9 -30.4 -12.3 -5.6 3.8 27 27 A K H 3X S+ 0 0 56 -4,-1.8 4,-1.6 -5,-0.3 -1,-0.3 0.941 108.2 38.3 -66.0 -43.4 -12.0 -8.6 1.4 28 28 A D H X S+ 0 0 15 -4,-2.3 4,-2.8 -5,-0.3 3,-1.0 0.977 105.3 57.3 -50.9 -62.7 -7.6 -5.6 -0.0 31 31 A T H 3X S+ 0 0 35 -4,-1.6 4,-3.1 1,-0.3 5,-0.4 0.883 105.8 52.6 -35.3 -49.6 -8.0 -7.1 -3.6 32 32 A K H 3X S+ 0 0 100 -4,-2.0 4,-3.0 1,-0.2 5,-0.3 0.943 110.6 46.3 -56.2 -46.0 -7.9 -3.5 -4.8 33 33 A M H X S+ 0 0 7 -4,-3.0 4,-2.1 -5,-0.4 3,-0.8 0.966 114.6 49.4 -70.5 -50.8 -3.1 -1.6 -7.3 37 37 A A H 3X S+ 0 0 4 -4,-3.8 4,-2.5 -5,-0.3 5,-0.3 0.935 106.9 56.5 -54.8 -44.7 0.0 -2.3 -5.2 38 38 A L H 3X S+ 0 0 72 -4,-2.4 4,-2.7 -5,-0.4 5,-0.3 0.860 106.4 52.2 -57.1 -31.2 1.2 -4.8 -7.9 39 39 A D H + 0 0 22 0, 0.0 3,-1.0 0, 0.0 4,-0.2 -0.289 29.6 165.9 -60.9 69.0 8.2 4.1 -10.4 46 46 A P G > + 0 0 72 0, 0.0 3,-5.4 0, 0.0 5,-0.1 0.758 51.8 94.5 -60.9 -25.8 10.1 6.8 -12.4 47 47 A K G 3 S+ 0 0 90 1,-0.3 -3,-0.0 -3,-0.2 -44,-0.0 0.885 95.0 36.6 -33.7 -54.0 9.2 9.2 -9.6 48 48 A L G < S- 0 0 44 -3,-1.0 -1,-0.3 1,-0.0 -45,-0.0 0.503 133.0-100.0 -80.3 -0.3 12.6 8.4 -8.1 49 49 A E < - 0 0 114 -3,-5.4 -2,-0.1 -4,-0.2 -1,-0.0 0.767 28.5-150.6 83.9 103.9 14.0 8.2 -11.6 50 50 A D S S+ 0 0 37 1,-0.2 2,-9.9 -6,-0.2 8,-0.4 0.929 73.7 102.8 -73.4 -42.7 14.3 4.6 -13.0 51 51 A K S S- 0 0 176 1,-0.2 -1,-0.2 6,-0.1 -2,-0.0 0.234 81.4-142.0 -34.5 48.8 17.2 5.6 -15.3 52 52 A S - 0 0 27 -2,-9.9 -1,-0.2 1,-0.2 -2,-0.1 0.163 24.2-174.6 -24.3 87.6 19.2 3.8 -12.6 53 53 A P S S+ 0 0 89 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 0.923 80.7 29.4 -61.6 -47.5 22.0 6.3 -12.8 54 54 A D S S- 0 0 146 1,-0.1 -2,-0.1 0, 0.0 -3,-0.0 0.964 109.7-119.3 -79.8 -57.0 24.2 4.5 -10.3 55 55 A S S S+ 0 0 85 0, 0.0 2,-4.1 0, 0.0 3,-0.4 -0.509 95.7 69.3 156.2 -81.4 23.0 0.9 -10.9 56 56 A P S S+ 0 0 76 0, 0.0 4,-0.2 0, 0.0 -4,-0.0 -0.009 74.5 112.1 -60.9 40.1 21.5 -0.9 -7.9 57 57 A E S >> S+ 0 0 45 -2,-4.1 3,-2.2 2,-0.1 4,-0.8 0.943 70.8 38.7 -80.4 -80.0 18.6 1.6 -8.3 58 58 A M H >> S+ 0 0 118 -3,-0.4 3,-5.9 -8,-0.4 4,-1.0 0.877 114.0 53.1 -33.7 -81.5 15.5 -0.4 -9.4 59 59 A K H 3> S+ 0 0 143 1,-0.3 4,-0.5 2,-0.2 -1,-0.3 0.792 101.7 65.9 -27.6 -34.7 16.2 -3.5 -7.2 60 60 A D H <> S+ 0 0 107 -3,-2.2 4,-0.7 -4,-0.2 3,-0.4 0.855 102.5 45.3 -62.8 -31.2 16.4 -0.8 -4.5 61 61 A F H XX S+ 0 0 50 -3,-5.9 4,-0.9 -4,-0.8 3,-0.5 0.889 96.9 69.7 -80.5 -38.7 12.6 -0.1 -5.0 62 62 A R H 3X S+ 0 0 155 -4,-1.0 4,-0.6 1,-0.2 -1,-0.2 0.714 96.1 61.5 -52.9 -13.4 11.6 -3.8 -5.1 63 63 A H H 3X S+ 0 0 104 -4,-0.5 4,-1.5 -3,-0.4 -1,-0.2 0.944 98.2 51.3 -80.2 -49.8 12.5 -3.7 -1.4 64 64 A G H XX S+ 0 0 13 -4,-0.7 4,-1.8 -3,-0.5 3,-1.0 0.977 122.7 28.7 -51.0 -71.2 9.9 -1.1 -0.3 65 65 A F H 3X>S+ 0 0 15 -4,-0.9 5,-1.0 1,-0.2 4,-0.7 0.989 107.7 70.7 -54.9 -65.0 6.8 -2.7 -1.8 66 66 A D H 3<5S+ 0 0 93 -4,-0.6 -1,-0.2 -5,-0.3 -2,-0.2 0.773 109.6 39.5 -20.6 -41.8 8.2 -6.3 -1.6 67 67 A I H X5S+ 0 0 76 -4,-1.8 4,-2.1 -5,-0.2 3,-1.8 0.997 119.8 47.2 -64.8 -62.9 4.3 -3.7 1.9 69 69 A V H 3X5S+ 0 0 21 -4,-0.7 4,-1.0 1,-0.3 -1,-0.2 0.748 109.4 60.8 -52.0 -17.9 2.8 -5.6 -1.0 70 70 A G H 3>X S+ 0 0 78 -4,-1.0 4,-1.0 1,-0.3 3,-0.8 0.941 108.7 51.8 -61.1 -45.1 -1.6 -10.3 0.4 74 74 A D H 3< S+ 0 0 103 -4,-1.1 -1,-0.3 1,-0.2 -2,-0.2 0.767 106.0 57.7 -64.0 -20.6 -1.3 -11.9 3.9 75 75 A A H 3X S+ 0 0 16 -4,-1.7 4,-1.0 -3,-0.5 -1,-0.2 0.802 108.8 45.3 -80.0 -27.4 -4.2 -9.6 5.0 76 76 A L H XX S+ 0 0 25 -4,-1.2 3,-2.5 -3,-0.8 4,-2.1 0.947 114.9 38.8 -78.7 -81.2 -6.5 -11.0 2.3 77 77 A K H 3X S+ 0 0 125 -4,-1.0 4,-0.8 1,-0.3 6,-0.3 0.732 115.2 63.3 -43.4 -15.1 -6.2 -14.9 2.3 78 78 A L H 34>S+ 0 0 35 -5,-0.4 5,-3.1 2,-0.2 6,-0.4 0.882 106.3 38.5 -79.8 -38.2 -6.0 -14.1 6.1 79 79 A A H X<>S+ 0 0 7 -3,-2.5 3,-0.5 -4,-1.0 5,-0.5 0.855 119.0 47.5 -80.4 -34.6 -9.6 -12.7 6.2 80 80 A N H 3<5S+ 0 0 100 -4,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.730 110.5 53.2 -78.6 -19.3 -11.0 -15.2 3.8 81 81 A E T 3<5S- 0 0 130 -4,-0.8 -1,-0.2 -5,-0.5 -2,-0.2 0.500 132.6 -89.5 -91.8 -2.7 -9.3 -18.1 5.6 82 82 A G T <>5S+ 0 0 49 -3,-0.5 4,-0.7 -4,-0.2 3,-0.4 0.493 101.4 115.7 106.5 8.7 -10.9 -17.0 8.9 83 83 A K H >< + 0 0 119 -5,-3.1 4,-0.5 -6,-0.3 -4,-0.3 0.337 65.2 80.1 -86.1 8.1 -8.0 -14.7 9.9 84 84 A V H >X S+ 0 0 144 -4,-0.7 3,-1.2 1,-0.2 4,-0.5 0.752 110.7 68.9 -80.8 -22.6 -9.1 -12.4 14.7 87 87 A A H >X S+ 0 0 16 -4,-0.5 3,-3.3 1,-0.3 4,-1.6 0.978 75.0 79.4 -60.4 -54.2 -8.0 -9.9 12.1 88 88 A Q H 3X S+ 0 0 80 -4,-2.1 4,-1.1 1,-0.3 -1,-0.3 0.774 92.8 57.8 -24.2 -31.5 -10.5 -7.2 13.3 89 89 A A H <> S+ 0 0 52 -3,-1.2 4,-0.7 -4,-0.2 -1,-0.3 0.920 106.8 43.5 -72.4 -41.6 -7.8 -6.8 15.9 90 90 A A H XX S+ 0 0 57 -3,-3.3 4,-2.0 -4,-0.5 3,-0.7 0.873 104.2 65.4 -71.8 -34.0 -5.0 -6.1 13.4 91 91 A A H 3< S+ 0 0 46 -4,-1.6 -1,-0.2 1,-0.3 -2,-0.2 0.897 105.5 44.2 -55.8 -37.2 -7.4 -3.7 11.4 92 92 A E H 3< S+ 0 0 135 -4,-1.1 -1,-0.3 -5,-0.4 -2,-0.2 0.695 107.6 63.4 -80.5 -16.6 -7.4 -1.4 14.5 93 93 A Q H << S- 0 0 142 -3,-0.7 -2,-0.2 -4,-0.7 2,-0.2 0.982 89.7-159.1 -71.5 -57.9 -3.6 -1.9 14.8 94 94 A L < - 0 0 122 -4,-2.0 -1,-0.1 1,-0.1 -2,-0.1 -0.498 18.1-121.2 104.2-178.0 -2.6 -0.3 11.4 95 95 A K + 0 0 109 -2,-0.2 3,-0.2 2,-0.1 -1,-0.1 0.573 41.3 154.9-133.6 -44.1 0.6 -0.7 9.4 96 96 A T S S- 0 0 117 1,-0.1 4,-0.3 2,-0.1 0, 0.0 0.636 72.8 -95.9 7.7 77.8 2.3 2.7 8.9 97 97 A T - 0 0 38 1,-0.2 3,-0.3 2,-0.1 4,-0.2 0.274 32.1-123.0 -13.8 117.8 5.6 0.9 8.5 98 98 A R S S+ 0 0 232 1,-0.3 2,-2.3 -3,-0.2 -1,-0.2 0.889 112.1 65.0 -42.3 -40.9 7.0 1.1 12.0 99 99 A N S S- 0 0 91 1,-0.1 -1,-0.3 3,-0.0 -2,-0.1 -0.275 98.2-140.8 -80.1 56.6 10.0 2.9 10.4 100 100 A A - 0 0 73 -2,-2.3 -2,-0.1 -4,-0.3 -3,-0.1 0.241 27.3-122.9 -19.3 89.7 7.8 5.8 9.4 101 101 A Y - 0 0 154 -4,-0.2 -1,-0.0 2,-0.1 -5,-0.0 0.078 39.8 -77.0 -38.5 159.5 9.5 6.2 6.0 102 102 A H - 0 0 129 2,-0.2 -1,-0.0 1,-0.1 -3,-0.0 -0.043 53.3 -92.5 -56.0 168.6 10.9 9.7 5.4 103 103 A Q S S- 0 0 153 1,-0.1 -1,-0.1 -3,-0.1 2,-0.1 0.867 82.1 -77.6 -54.9 -32.9 8.5 12.4 4.5 104 104 A K S S+ 0 0 106 -102,-0.1 2,-0.7 2,-0.1 -2,-0.2 -0.448 118.1 29.9 171.5 -89.8 9.2 11.6 0.8 105 105 A Y 0 0 151 1,-0.3 -2,-0.0 -2,-0.1 -103,-0.0 -0.208 360.0 360.0 -90.8 47.4 12.4 12.8 -0.9 106 106 A R 0 0 213 -2,-0.7 -1,-0.3 0, 0.0 -2,-0.1 -0.241 360.0 360.0 57.7 360.0 14.4 12.7 2.4