==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=18-JAN-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER REPLICATION 06-APR-12 4APV . COMPND 2 MOLECULE: PRIMOSOMAL REPLICATION PROTEIN N; . SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE; . AUTHOR Y.H.LO,Y.H.HUANG,C.D.HSIAO,C.Y.HUANG . 97 2 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6868.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 66 68.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 44 45.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 8.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 2 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A T 0 0 199 0, 0.0 2,-0.2 0, 0.0 75,-0.0 0.000 360.0 360.0 360.0 137.2 -6.2 8.0 6.7 2 3 A N + 0 0 83 74,-0.0 2,-0.3 2,-0.0 0, 0.0 -0.646 360.0 141.3-162.3 95.4 -5.8 5.7 3.8 3 4 A R - 0 0 187 -2,-0.2 2,-0.5 73,-0.1 73,-0.2 -0.938 20.6-176.4-146.7 117.1 -3.9 7.0 0.7 4 5 A L E -A 75 0A 45 71,-2.9 71,-2.1 -2,-0.3 2,-0.5 -0.964 1.8-174.7-112.3 130.5 -1.5 5.3 -1.6 5 6 A E E +A 74 0A 113 -2,-0.5 2,-0.4 69,-0.2 69,-0.2 -0.996 18.5 162.6-121.9 124.5 0.3 7.0 -4.5 6 7 A L E -A 73 0A 26 67,-2.5 67,-2.7 -2,-0.5 2,-0.2 -0.991 22.1-157.3-149.0 130.8 2.4 4.8 -6.6 7 8 A S E +A 72 0A 52 -2,-0.4 2,-0.3 65,-0.3 65,-0.2 -0.645 33.5 111.3-102.7 164.4 3.9 5.0 -10.1 8 9 A G E -A 71 0A 13 63,-2.1 63,-2.6 -2,-0.2 2,-0.5 -0.991 58.9 -60.1 166.4-167.8 5.0 2.1 -12.4 9 10 A I E -AB 70 31A 76 22,-2.5 22,-2.8 -2,-0.3 2,-0.4 -0.927 43.6-119.8-110.9 128.8 4.5 0.1 -15.5 10 11 A I E + B 0 30A 1 59,-2.6 58,-3.0 -2,-0.5 20,-0.2 -0.526 34.8 177.3 -63.8 118.4 1.4 -1.9 -16.3 11 12 A C E + 0 0 31 18,-2.2 2,-0.4 -2,-0.4 -1,-0.2 0.435 58.9 53.8-110.9 -3.5 2.7 -5.4 -16.6 12 13 A R E S- B 0 29A 142 17,-0.9 17,-0.6 54,-0.1 -1,-0.1 -0.999 95.1 -99.9-132.8 137.5 -0.5 -7.3 -17.1 13 14 A T E - 0 0 98 -2,-0.4 53,-0.1 15,-0.1 14,-0.1 -0.342 48.4-110.0 -53.9 125.0 -3.1 -6.6 -19.8 14 15 A P E - 0 0 2 0, 0.0 2,-0.6 0, 0.0 14,-0.2 -0.295 26.4-140.1 -60.9 136.9 -6.0 -4.6 -18.2 15 16 A L E - B 0 27A 101 12,-3.0 12,-2.3 -3,-0.1 2,-0.4 -0.903 8.5-149.5-107.0 118.6 -9.3 -6.5 -17.8 16 17 A R E - B 0 26A 123 -2,-0.6 2,-0.4 10,-0.2 10,-0.2 -0.687 18.8-178.3 -84.7 129.6 -12.5 -4.6 -18.5 17 18 A K E - B 0 25A 125 8,-3.5 8,-3.3 -2,-0.4 2,-0.4 -0.997 10.3-168.6-131.6 134.6 -15.5 -5.7 -16.5 18 19 A V - 0 0 104 -2,-0.4 5,-0.1 6,-0.3 3,-0.1 -0.978 13.1-145.7-119.4 132.2 -19.0 -4.4 -16.6 19 20 A S - 0 0 30 3,-0.7 3,-0.3 -2,-0.4 -2,-0.0 -0.758 19.0-129.9 -89.1 142.4 -21.7 -5.2 -14.0 20 21 A P S S+ 0 0 134 0, 0.0 2,-1.8 0, 0.0 -1,-0.1 0.922 107.6 57.4 -55.6 -47.6 -25.2 -5.6 -15.4 21 22 A S S S- 0 0 99 1,-0.1 -2,-0.1 2,-0.1 0, 0.0 -0.513 124.2 -96.4 -83.3 68.3 -26.5 -3.2 -12.7 22 23 A G S S+ 0 0 25 -2,-1.8 -3,-0.7 -3,-0.3 -1,-0.1 -0.195 88.6 108.1 56.2-146.3 -24.2 -0.4 -13.7 23 24 A I - 0 0 76 -5,-0.1 2,-0.2 1,-0.1 -4,-0.1 0.853 48.1-173.6 43.2 69.0 -20.9 -0.1 -11.8 24 25 A P - 0 0 9 0, 0.0 31,-2.2 0, 0.0 2,-0.3 -0.520 1.7-164.5 -85.6 158.8 -18.3 -1.3 -14.3 25 26 A H E -BC 17 54A 47 -8,-3.3 -8,-3.5 29,-0.2 2,-0.4 -0.949 16.4-150.4-140.7 161.6 -14.6 -1.8 -13.4 26 27 A C E -BC 16 53A 0 27,-2.0 27,-2.4 -2,-0.3 2,-0.4 -0.997 17.7-166.7-133.7 126.3 -11.2 -2.2 -14.9 27 28 A Q E +BC 15 52A 101 -12,-2.3 -12,-3.0 -2,-0.4 2,-0.3 -0.912 15.1 153.5-118.2 143.0 -8.5 -4.1 -13.2 28 29 A F E - C 0 51A 8 23,-2.5 23,-2.7 -2,-0.4 2,-0.5 -0.943 38.8-107.8-152.3 175.9 -4.8 -4.3 -13.9 29 30 A V E -BC 12 50A 31 -17,-0.6 -18,-2.2 -2,-0.3 -17,-0.9 -0.959 24.6-159.0-117.6 128.7 -1.4 -5.0 -12.4 30 31 A L E -BC 10 49A 0 19,-2.7 19,-2.9 -2,-0.5 2,-0.7 -0.919 4.9-153.2-108.8 120.0 1.1 -2.2 -11.8 31 32 A E E -BC 9 48A 48 -22,-2.8 -22,-2.5 -2,-0.5 2,-0.4 -0.843 14.4-167.8 -98.1 114.9 4.8 -3.0 -11.4 32 33 A H E + C 0 47A 18 15,-3.0 15,-2.2 -2,-0.7 2,-0.3 -0.835 12.5 171.0-104.5 134.7 6.8 -0.4 -9.4 33 34 A R E + C 0 46A 156 -2,-0.4 2,-0.3 13,-0.2 13,-0.2 -0.977 16.7 139.5-138.7 128.7 10.6 -0.1 -9.1 34 35 A S E - C 0 45A 24 11,-2.2 11,-2.9 -2,-0.3 2,-0.5 -0.966 50.1-109.4-154.0 167.7 12.4 2.7 -7.4 35 36 A V E - C 0 44A 84 -2,-0.3 2,-0.3 9,-0.2 9,-0.2 -0.945 40.9-173.6-100.3 128.8 15.3 3.6 -5.1 36 37 A Q E - C 0 43A 102 7,-3.1 7,-2.5 -2,-0.5 2,-0.5 -0.833 21.2-122.0-120.8 159.4 14.1 4.8 -1.7 37 38 A E E + C 0 42A 118 -2,-0.3 2,-0.3 5,-0.2 5,-0.2 -0.878 32.6 167.9-108.1 132.4 15.9 6.3 1.3 38 39 A E E > - C 0 41A 115 3,-3.0 3,-2.1 -2,-0.5 -2,-0.0 -0.929 68.5 -18.3-149.1 119.1 15.8 4.6 4.7 39 40 A A T 3 S- 0 0 94 -2,-0.3 3,-0.1 1,-0.3 -2,-0.0 0.798 127.5 -52.9 55.5 30.2 17.9 5.3 7.8 40 41 A G T 3 S+ 0 0 58 1,-0.3 -1,-0.3 0, 0.0 2,-0.3 0.168 117.9 110.4 97.1 -18.1 20.4 7.0 5.5 41 42 A F E < -C 38 0A 154 -3,-2.1 -3,-3.0 1,-0.0 2,-0.7 -0.654 64.7-134.2 -94.8 145.3 20.7 4.1 3.1 42 43 A H E +C 37 0A 147 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.2 -0.884 35.6 170.9 -98.1 113.7 19.5 3.9 -0.5 43 44 A R E -C 36 0A 136 -7,-2.5 -7,-3.1 -2,-0.7 2,-0.2 -0.894 34.5-103.5-126.2 154.5 17.6 0.7 -1.1 44 45 A Q E -C 35 0A 114 -2,-0.3 2,-0.4 -9,-0.2 -9,-0.2 -0.514 27.6-158.7 -77.9 136.8 15.5 -0.7 -3.9 45 46 A A E +C 34 0A 21 -11,-2.9 -11,-2.2 -2,-0.2 2,-0.4 -0.970 15.7 174.7-112.2 133.0 11.7 -0.8 -3.6 46 47 A W E +C 33 0A 132 -2,-0.4 2,-0.3 -13,-0.2 -13,-0.2 -0.998 4.7 157.8-138.3 137.8 9.7 -3.2 -5.7 47 48 A a E -C 32 0A 49 -15,-2.2 -15,-3.0 -2,-0.4 2,-0.6 -0.982 33.1-147.3-156.8 149.2 6.1 -4.2 -5.9 48 49 A Q E -C 31 0A 72 -2,-0.3 -17,-0.2 -17,-0.2 -2,-0.0 -0.927 34.1-170.2-112.4 101.7 3.5 -5.7 -8.2 49 50 A M E -C 30 0A 16 -19,-2.9 -19,-2.7 -2,-0.6 2,-0.1 -0.856 19.9-135.2-104.4 116.5 0.3 -4.0 -7.1 50 51 A P E -C 29 0A 31 0, 0.0 39,-2.6 0, 0.0 2,-0.4 -0.450 28.7-165.7 -60.1 138.8 -3.3 -5.0 -8.3 51 52 A V E -Cd 28 89A 0 -23,-2.7 -23,-2.5 37,-0.2 2,-0.4 -0.990 10.5-168.1-133.6 139.1 -5.2 -1.8 -9.2 52 53 A I E -Cd 27 90A 36 37,-2.7 39,-2.5 -2,-0.4 2,-0.4 -0.993 4.3-170.4-130.2 137.1 -8.9 -1.3 -9.8 53 54 A I E -C 26 0A 12 -27,-2.4 -27,-2.0 -2,-0.4 2,-0.2 -0.993 16.5-171.9-126.1 125.5 -10.7 1.7 -11.3 54 55 A S E +C 25 0A 42 37,-0.5 -29,-0.2 -2,-0.4 4,-0.2 -0.720 29.5 62.1-116.5 164.1 -14.5 1.8 -11.1 55 56 A G S > S- 0 0 13 -31,-2.2 3,-1.1 -2,-0.2 4,-0.3 0.246 73.2 -99.2 101.6 141.9 -17.4 3.9 -12.4 56 57 A H G > S+ 0 0 94 1,-0.3 3,-1.9 2,-0.2 4,-0.3 0.887 119.8 62.8 -52.6 -42.2 -19.0 4.8 -15.7 57 58 A E G 3 S+ 0 0 159 1,-0.3 3,-0.4 2,-0.1 -1,-0.3 0.787 105.3 45.1 -56.4 -32.5 -17.2 8.1 -15.5 58 59 A N G X> S+ 0 0 52 -3,-1.1 3,-1.3 1,-0.2 4,-0.7 0.397 79.4 105.7 -95.6 2.2 -13.8 6.3 -15.7 59 60 A Q T <4 S+ 0 0 83 -3,-1.9 4,-0.5 -4,-0.3 -1,-0.2 0.731 74.1 60.6 -56.3 -26.4 -14.7 3.9 -18.5 60 61 A A T >4 S+ 0 0 72 -3,-0.4 3,-1.3 -4,-0.3 -1,-0.3 0.865 90.7 66.2 -70.0 -35.1 -12.6 5.9 -20.9 61 62 A I G X> S+ 0 0 53 -3,-1.3 3,-2.1 1,-0.3 4,-0.7 0.872 93.4 60.9 -59.8 -38.6 -9.3 5.4 -19.1 62 63 A T G >< S+ 0 0 11 -4,-0.7 3,-0.5 1,-0.3 -1,-0.3 0.814 102.1 51.0 -56.8 -35.0 -9.3 1.7 -19.8 63 64 A H G <4 S+ 0 0 147 -3,-1.3 -1,-0.3 -4,-0.5 -2,-0.2 0.330 111.2 49.6 -90.8 9.8 -9.3 2.1 -23.5 64 65 A S G <4 S+ 0 0 82 -3,-2.1 2,-0.4 -4,-0.2 -1,-0.2 0.353 103.6 67.1-123.1 -3.0 -6.3 4.5 -23.3 65 66 A I << + 0 0 9 -4,-0.7 2,-0.3 -3,-0.5 3,-0.0 -0.923 56.8 156.4-117.2 147.5 -4.1 2.3 -21.1 66 67 A T > - 0 0 80 -2,-0.4 3,-2.3 -53,-0.1 -56,-0.3 -0.919 52.2 -52.3-153.2 178.7 -2.5 -1.0 -21.9 67 68 A V T 3 S+ 0 0 71 -2,-0.3 -56,-0.2 1,-0.3 3,-0.1 -0.345 124.3 30.7 -58.4 134.3 0.4 -3.2 -21.0 68 69 A G T 3 S+ 0 0 46 -58,-3.0 -1,-0.3 1,-0.3 2,-0.2 0.280 85.3 139.8 95.2 -11.1 3.6 -1.2 -21.0 69 70 A S < - 0 0 11 -3,-2.3 -59,-2.6 -59,-0.2 2,-0.5 -0.460 51.1-135.7 -65.5 134.7 1.9 2.1 -20.0 70 71 A A E +A 9 0A 19 -61,-0.2 27,-2.6 -2,-0.2 2,-0.3 -0.843 40.4 169.0 -89.6 128.7 3.8 4.2 -17.6 71 72 A V E -AE 8 96A 0 -63,-2.6 -63,-2.1 -2,-0.5 2,-0.4 -0.977 35.2-148.7-148.5 145.8 1.3 5.3 -15.0 72 73 A T E -AE 7 95A 26 23,-2.7 23,-2.6 -2,-0.3 2,-0.4 -0.994 23.2-168.7-122.3 128.2 0.9 7.0 -11.6 73 74 A V E -AE 6 94A 0 -67,-2.7 -67,-2.5 -2,-0.4 2,-0.4 -0.903 9.5-172.8-121.8 140.7 -2.1 5.9 -9.5 74 75 A R E +AE 5 93A 77 19,-2.5 18,-2.4 -2,-0.4 19,-1.9 -1.000 34.1 99.0-135.1 130.3 -3.6 7.4 -6.3 75 76 A G E -AE 4 91A 0 -71,-2.1 -71,-2.9 -2,-0.4 2,-0.3 -0.904 65.8 -60.1-175.3-157.4 -6.3 5.9 -4.2 76 77 A F E - E 0 90A 102 14,-1.9 14,-2.8 -2,-0.3 2,-0.3 -0.812 41.5-127.8-110.6 153.1 -7.0 3.8 -1.1 77 78 A I E - E 0 89A 53 -2,-0.3 2,-0.3 12,-0.2 12,-0.2 -0.768 24.1-180.0 -98.2 148.4 -5.8 0.3 -0.3 78 79 A S E - E 0 88A 59 10,-2.2 10,-2.8 -2,-0.3 2,-0.3 -0.983 8.6-159.2-141.5 151.3 -8.1 -2.5 0.7 79 80 A a E - E 0 87A 60 -2,-0.3 2,-0.3 8,-0.2 8,-0.2 -0.890 11.6-166.6-131.4 155.2 -7.2 -6.1 1.6 80 81 A H E - E 0 86A 107 6,-1.9 6,-1.7 -2,-0.3 2,-0.2 -0.990 35.5-100.8-138.6 151.6 -8.6 -9.6 1.9 81 82 A K E E 0 85A 192 -2,-0.3 4,-0.2 4,-0.3 -2,-0.0 -0.465 360.0 360.0 -75.8 137.6 -7.1 -12.7 3.5 82 83 A A 0 0 116 2,-1.6 -1,-0.1 -2,-0.2 0, 0.0 -0.797 360.0 360.0 -86.2 360.0 -5.4 -15.4 1.4 83 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 84 87 A L 0 0 195 0, 0.0 -2,-1.6 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 169.6 -1.0 -12.8 4.7 85 88 A S E - E 0 81A 52 -4,-0.2 -4,-0.3 -6,-0.0 2,-0.2 -0.822 360.0-119.6-107.8 131.5 -3.7 -10.7 3.0 86 89 A K E - E 0 80A 108 -6,-1.7 -6,-1.9 -2,-0.4 2,-0.4 -0.467 30.2-143.4 -65.6 128.0 -3.9 -9.7 -0.7 87 90 A M E - E 0 79A 68 -2,-0.2 2,-0.4 -8,-0.2 -8,-0.2 -0.744 15.6-172.2-100.0 139.3 -3.8 -5.9 -1.3 88 91 A V E - E 0 78A 17 -10,-2.8 -10,-2.2 -2,-0.4 2,-0.7 -0.995 17.9-140.5-128.5 134.8 -5.7 -4.0 -4.0 89 92 A L E -dE 51 77A 0 -39,-2.6 -37,-2.7 -2,-0.4 2,-0.9 -0.851 11.9-154.4 -90.8 111.5 -5.3 -0.3 -4.8 90 93 A H E -dE 52 76A 54 -14,-2.8 -14,-1.9 -2,-0.7 2,-0.4 -0.797 21.9-140.5 -84.5 108.1 -8.7 1.3 -5.5 91 94 A A E + E 0 75A 16 -39,-2.5 -37,-0.5 -2,-0.9 -16,-0.3 -0.555 32.0 174.8 -78.7 125.2 -7.7 4.2 -7.8 92 95 A E E S+ 0 0 118 -18,-2.4 2,-0.3 -2,-0.4 -17,-0.2 0.633 79.2 11.0 -93.5 -24.7 -9.5 7.6 -7.5 93 96 A Q E - E 0 74A 110 -19,-1.9 -19,-2.5 2,-0.0 2,-0.3 -0.994 61.4-169.0-156.1 150.4 -7.2 9.1 -10.1 94 97 A I E - E 0 73A 38 -2,-0.3 2,-0.4 -21,-0.2 -21,-0.2 -0.992 5.6-160.4-140.4 141.9 -4.6 8.0 -12.6 95 98 A E E - E 0 72A 127 -23,-2.6 -23,-2.7 -2,-0.3 2,-0.3 -0.988 15.7-137.5-127.2 138.9 -2.1 10.0 -14.6 96 99 A L E - E 0 71A 71 -2,-0.4 -25,-0.2 -25,-0.2 2,-0.1 -0.712 10.7-165.7 -99.0 148.9 -0.4 8.7 -17.8 97 100 A I 0 0 97 -27,-2.6 -27,-0.2 -2,-0.3 -26,-0.1 -0.520 360.0 360.0-129.9 61.3 3.3 9.1 -18.8 98 101 A D 0 0 143 -2,-0.1 -1,-0.1 -29,-0.1 -27,-0.0 -0.137 360.0 360.0-139.6 360.0 3.5 8.2 -22.5