==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSFERASE 07-AUG-97 1ARK . COMPND 2 MOLECULE: NEBULIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.S.POLITOU,A.PASTORE . 60 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4508.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 30 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 3.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 25.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A T 0 0 190 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 89.2 -1.6 1.4 -11.0 2 2 A A + 0 0 110 1,-0.1 3,-0.0 2,-0.0 0, 0.0 0.989 360.0 135.5 54.8 68.3 1.7 -0.4 -10.6 3 3 A G + 0 0 63 2,-0.1 -1,-0.1 1,-0.1 0, 0.0 0.069 22.9 115.4-132.6 24.6 4.0 2.4 -11.8 4 4 A K + 0 0 171 26,-0.1 56,-0.4 55,-0.0 -1,-0.1 0.975 44.0 165.2 -60.5 -53.4 6.7 2.4 -9.2 5 5 A I - 0 0 84 54,-0.1 55,-0.5 25,-0.1 2,-0.2 0.227 24.0-135.5 54.9 169.6 9.5 1.4 -11.7 6 6 A F E -AB 28 59A 47 22,-1.5 22,-0.7 53,-0.2 2,-0.3 -0.714 9.2-145.2-142.3-166.0 13.1 1.8 -10.7 7 7 A R E -AB 27 58A 104 51,-1.7 51,-2.7 -2,-0.2 20,-0.2 -0.925 12.2-128.1-169.1 142.2 16.5 3.1 -12.1 8 8 A A - 0 0 0 18,-1.7 17,-1.4 15,-0.3 49,-0.2 -0.519 12.2-172.5 -91.7 163.2 20.2 2.2 -12.0 9 9 A M + 0 0 56 15,-0.2 2,-0.3 -2,-0.2 15,-0.3 0.292 64.4 46.6-136.7 7.1 22.9 4.7 -11.1 10 10 A Y S S- 0 0 123 13,-0.1 2,-1.3 12,-0.1 -1,-0.1 -0.947 82.7-106.3-145.0 167.1 26.2 2.8 -11.8 11 11 A D - 0 0 130 -2,-0.3 12,-0.2 12,-0.2 10,-0.0 -0.568 44.2-169.4 -95.5 73.9 27.8 0.6 -14.5 12 12 A Y - 0 0 35 -2,-1.3 2,-0.6 10,-1.2 -4,-0.0 -0.283 13.3-141.2 -61.8 148.0 27.5 -2.8 -12.8 13 13 A M - 0 0 154 8,-0.1 8,-0.1 10,-0.0 -1,-0.1 -0.903 18.1-125.1-115.8 107.2 29.4 -5.6 -14.4 14 14 A A - 0 0 29 -2,-0.6 7,-0.1 1,-0.2 3,-0.1 -0.195 14.2-155.7 -48.7 130.7 27.5 -9.0 -14.3 15 15 A A S S- 0 0 78 5,-0.1 2,-0.2 0, 0.0 -1,-0.2 0.842 71.2 -16.9 -81.0 -32.3 29.8 -11.6 -12.7 16 16 A D S S- 0 0 133 4,-0.1 3,-0.5 -3,-0.0 0, 0.0 -0.662 93.0 -65.5-147.7-155.9 28.1 -14.5 -14.5 17 17 A A S S+ 0 0 95 -2,-0.2 -3,-0.0 1,-0.2 3,-0.0 0.208 119.0 70.6 -90.4 18.8 24.9 -15.4 -16.3 18 18 A D S S+ 0 0 79 32,-0.1 33,-2.0 2,-0.1 -1,-0.2 0.669 95.0 49.6-105.9 -22.4 22.8 -14.8 -13.1 19 19 A E B S-c 51 0B 28 -3,-0.5 2,-0.3 31,-0.3 33,-0.2 -0.328 78.1-122.8-103.4-168.6 23.1 -11.0 -12.8 20 20 A V - 0 0 5 31,-1.1 2,-0.4 30,-0.1 -5,-0.1 -0.842 9.2-128.9-131.4 169.4 22.5 -8.2 -15.3 21 21 A S + 0 0 76 -2,-0.3 2,-0.3 -8,-0.1 -8,-0.1 -0.611 39.0 161.1-121.5 75.6 24.6 -5.3 -16.7 22 22 A F - 0 0 1 -2,-0.4 -10,-1.2 4,-0.0 2,-0.2 -0.670 23.6-148.1 -93.7 148.9 22.6 -2.1 -16.4 23 23 A K > - 0 0 88 -2,-0.3 3,-1.8 -12,-0.2 2,-0.3 -0.666 34.8 -76.1-111.2 169.7 24.4 1.3 -16.5 24 24 A D T 3 S+ 0 0 99 -15,-0.3 -15,-0.2 1,-0.2 3,-0.1 -0.457 120.8 27.1 -65.3 122.9 23.6 4.7 -14.8 25 25 A G T 3 S+ 0 0 44 -17,-1.4 -1,-0.2 1,-0.5 -16,-0.1 0.070 92.9 116.8 112.7 -24.3 20.7 6.3 -16.6 26 26 A D < - 0 0 16 -3,-1.8 -18,-1.7 1,-0.1 -1,-0.5 -0.396 57.4-135.5 -74.6 154.7 19.1 3.0 -17.8 27 27 A A E -A 7 0A 31 -20,-0.2 17,-1.3 -3,-0.1 18,-0.3 -0.740 21.6-178.2-110.0 160.5 15.6 2.1 -16.6 28 28 A I E -A 6 0A 8 -22,-0.7 -22,-1.5 -2,-0.3 15,-0.1 -0.939 17.4-136.7-147.7 170.2 14.3 -1.3 -15.3 29 29 A I - 0 0 96 13,-0.4 11,-0.1 -2,-0.3 -1,-0.1 0.145 26.7-113.1-106.6-135.2 11.1 -2.9 -14.0 30 30 A N + 0 0 64 9,-0.1 11,-0.2 -24,-0.1 -25,-0.1 -0.334 38.0 160.1-169.0 79.3 10.7 -5.3 -11.0 31 31 A V S S+ 0 0 98 9,-0.7 2,-0.3 1,-0.1 10,-0.2 0.801 79.8 2.3 -75.7 -26.0 9.6 -8.9 -11.5 32 32 A Q E -D 40 0B 99 8,-1.7 8,-0.8 0, 0.0 2,-0.2 -0.883 58.3-162.4-147.5 179.2 11.0 -9.9 -8.0 33 33 A A E -D 39 0B 53 -2,-0.3 6,-0.2 6,-0.2 -3,-0.0 -0.585 11.7-179.4-172.2 103.7 12.6 -8.3 -4.9 34 34 A I - 0 0 83 4,-1.1 5,-0.2 -2,-0.2 -1,-0.1 0.731 37.2-154.6 -80.4 -19.8 14.5 -10.2 -2.2 35 35 A D S S+ 0 0 106 3,-0.9 3,-0.4 1,-0.1 -2,-0.0 0.341 70.3 37.5 60.0 155.5 15.1 -6.9 -0.3 36 36 A E S S+ 0 0 185 1,-0.2 -1,-0.1 18,-0.0 3,-0.1 0.823 130.4 32.1 38.3 38.8 18.1 -6.4 2.1 37 37 A G S S- 0 0 35 1,-0.2 17,-0.7 0, 0.0 2,-0.3 -0.178 118.1 -20.9-174.4 -82.8 20.1 -8.5 -0.4 38 38 A W E - E 0 53B 85 -3,-0.4 -4,-1.1 15,-0.2 -3,-0.9 -0.859 48.5-144.0-141.6 177.4 19.5 -8.5 -4.2 39 39 A M E -DE 33 52B 31 13,-1.9 13,-0.8 -2,-0.3 2,-0.3 -0.610 6.8-141.6-130.9-167.0 16.8 -7.6 -6.7 40 40 A Y E +DE 32 51B 71 -8,-0.8 -8,-1.7 11,-0.2 -9,-0.7 -0.857 30.9 134.6-164.8 125.6 15.4 -8.8 -10.1 41 41 A G E - E 0 50B 1 9,-1.2 9,-1.4 -2,-0.3 2,-0.7 -0.963 52.7 -90.6-160.6 175.3 14.1 -7.0 -13.2 42 42 A T E - E 0 49B 48 -2,-0.3 2,-0.5 7,-0.2 -13,-0.4 -0.854 40.1-121.6-101.8 117.1 14.3 -7.0 -17.0 43 43 A V >> - 0 0 4 5,-2.8 3,-1.6 -2,-0.7 4,-1.5 -0.338 18.5-157.7 -55.8 107.7 17.1 -4.7 -18.4 44 44 A Q T 34 S+ 0 0 146 -17,-1.3 -1,-0.2 -2,-0.5 -16,-0.1 0.707 87.8 70.5 -63.7 -14.8 15.0 -2.3 -20.6 45 45 A R T 34 S- 0 0 165 -18,-0.3 -1,-0.3 3,-0.1 -2,-0.1 0.792 130.2 -11.0 -73.6 -24.7 18.2 -1.6 -22.5 46 46 A T T <4 S- 0 0 97 -3,-1.6 -2,-0.2 2,-0.1 -1,-0.0 0.510 92.3-107.2-140.1 -47.3 18.2 -5.2 -24.0 47 47 A G < + 0 0 41 -4,-1.5 2,-0.2 1,-0.3 -3,-0.1 0.460 64.2 143.0 123.7 7.4 15.6 -7.4 -22.3 48 48 A R - 0 0 173 -5,-0.3 -5,-2.8 -6,-0.1 2,-0.5 -0.568 39.0-145.7 -79.7 141.1 17.8 -9.7 -20.2 49 49 A T E + E 0 42B 87 -7,-0.2 2,-0.2 -2,-0.2 -7,-0.2 -0.905 39.2 122.7-109.9 129.3 16.4 -10.7 -16.8 50 50 A G E - E 0 41B 1 -9,-1.4 -9,-1.2 -2,-0.5 -31,-0.3 -0.848 57.8 -62.8-159.4-164.8 18.8 -11.2 -13.8 51 51 A M E -cE 19 40B 34 -33,-2.0 -31,-1.1 -2,-0.2 -11,-0.2 -0.608 40.2-157.8 -95.1 157.7 19.7 -10.1 -10.3 52 52 A L E - E 0 39B 7 -13,-0.8 -13,-1.9 -2,-0.2 2,-0.5 -0.997 23.3-112.9-137.5 141.9 20.8 -6.6 -9.3 53 53 A P E >> - E 0 38B 11 0, 0.0 3,-2.2 0, 0.0 4,-1.4 -0.570 18.4-146.3 -73.6 120.7 22.7 -5.3 -6.2 54 54 A A T 34 S+ 0 0 38 -17,-0.7 -16,-0.1 -2,-0.5 -18,-0.0 0.752 97.3 67.8 -60.1 -19.8 20.3 -3.1 -4.1 55 55 A N T 34 S+ 0 0 148 -18,-0.2 -1,-0.3 1,-0.1 3,-0.1 0.442 108.1 37.2 -80.7 4.4 23.4 -1.0 -3.3 56 56 A Y T <4 S+ 0 0 92 -3,-2.2 -2,-0.2 1,-0.2 -47,-0.1 0.711 110.4 49.1-117.6 -62.0 23.5 0.2 -6.9 57 57 A V < + 0 0 12 -4,-1.4 2,-0.3 -49,-0.2 -49,-0.2 -0.390 65.8 179.3 -79.0 160.7 20.0 0.7 -8.4 58 58 A E E -B 7 0A 107 -51,-2.7 -51,-1.7 -2,-0.1 2,-0.1 -0.890 28.0 -91.4-149.4 179.5 17.4 2.7 -6.5 59 59 A A E B 6 0A 63 -2,-0.3 -53,-0.2 -53,-0.2 -54,-0.1 -0.447 360.0 360.0 -93.7 171.9 13.7 3.9 -6.8 60 60 A I 0 0 150 -55,-0.5 -54,-0.1 -56,-0.4 -1,-0.0 -0.093 360.0 360.0-147.7 360.0 12.5 7.2 -8.3