==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSFERASE 05-SEP-05 2AXD . COMPND 2 MOLECULE: DNA POLYMERASE III, THETA SUBUNIT; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR M.A.KENIRY,A.Y.PARK,E.A.OWEN,S.M.HAMDAN,G.PINTACUDA, . 76 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6976.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 53 69.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 13 17.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 37 48.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 S M 0 0 248 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -71.6 -7.0 22.4 -16.5 2 2 S L + 0 0 129 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.789 360.0 67.5-109.2 -53.2 -4.8 21.1 -19.4 3 3 S K - 0 0 136 1,-0.2 0, 0.0 2,-0.0 0, 0.0 0.765 64.9-179.4 -49.3 -40.9 -1.3 20.3 -18.1 4 4 S N >> + 0 0 85 1,-0.1 3,-2.3 3,-0.1 4,-1.1 0.309 38.6 124.7 60.5 -0.6 -2.7 17.4 -15.9 5 5 S L H 3> + 0 0 92 1,-0.3 4,-2.3 2,-0.2 -1,-0.1 0.819 65.3 66.3 -55.4 -33.2 0.8 16.6 -14.5 6 6 S A H 34 S+ 0 0 79 1,-0.2 -1,-0.3 2,-0.2 6,-0.1 0.703 100.1 52.4 -61.8 -20.5 -0.6 17.1 -11.0 7 7 S K H <4 S+ 0 0 144 -3,-2.3 -2,-0.2 1,-0.1 -1,-0.2 0.951 113.0 37.9 -78.8 -57.2 -2.7 14.0 -11.6 8 8 S L H <>S+ 0 0 82 -4,-1.1 5,-0.7 4,-0.1 -2,-0.2 0.783 88.7 161.7 -65.1 -30.0 -0.0 11.5 -12.7 9 9 S D T >X5 - 0 0 64 -4,-2.3 4,-2.2 -5,-0.2 3,-0.8 0.596 50.4-124.5 5.9 116.7 2.3 13.1 -10.1 10 10 S Q H 3>5S+ 0 0 178 1,-0.3 4,-1.8 2,-0.2 -1,-0.1 0.815 114.8 50.6 -48.2 -34.2 5.2 10.8 -9.3 11 11 S T H 3>5S+ 0 0 87 2,-0.2 4,-2.5 3,-0.2 -1,-0.3 0.901 107.0 53.4 -68.3 -43.2 4.1 11.0 -5.6 12 12 S E H <>5S+ 0 0 109 -3,-0.8 4,-1.4 1,-0.2 -2,-0.2 0.958 115.7 38.8 -56.3 -53.2 0.4 10.1 -6.5 13 13 S M H XX S+ 0 0 33 -4,-2.5 3,-0.8 1,-0.2 4,-0.6 0.906 102.7 59.7 -61.0 -40.7 -0.4 -7.1 -1.9 24 24 S G H >< S+ 0 0 31 -4,-2.2 3,-1.3 1,-0.3 -1,-0.2 0.870 99.6 56.2 -53.1 -38.7 2.6 -9.0 -3.0 25 25 S V H >< S+ 0 0 13 -4,-1.5 3,-1.9 1,-0.3 -1,-0.3 0.815 96.6 63.3 -67.3 -26.7 3.3 -9.7 0.7 26 26 S A H X< S+ 0 0 8 -4,-1.0 3,-1.6 -3,-0.8 4,-0.3 0.709 83.6 77.8 -69.6 -16.3 -0.1 -11.2 0.9 27 27 S F G X< + 0 0 82 -3,-1.3 3,-1.0 -4,-0.6 -1,-0.3 0.551 65.5 96.4 -67.0 -4.9 1.3 -13.8 -1.5 28 28 S K G X S+ 0 0 123 -3,-1.9 3,-1.5 1,-0.3 -1,-0.3 0.774 74.0 61.9 -56.2 -25.3 2.9 -15.2 1.6 29 29 S E G < S+ 0 0 120 -3,-1.6 3,-0.3 1,-0.3 -1,-0.3 0.918 101.8 51.4 -63.8 -36.0 -0.0 -17.6 1.7 30 30 S R G X S+ 0 0 82 -3,-1.0 3,-2.4 -4,-0.3 -1,-0.3 -0.068 72.6 133.0 -87.6 32.7 1.4 -18.8 -1.6 31 31 S Y T < + 0 0 160 -3,-1.5 -1,-0.2 1,-0.3 4,-0.2 0.523 47.1 90.7 -66.2 -3.2 4.8 -19.1 0.2 32 32 S N T 3 S+ 0 0 147 -3,-0.3 -1,-0.3 2,-0.1 -2,-0.1 0.763 96.4 44.0 -58.7 -20.1 4.9 -22.5 -1.6 33 33 S M S < S- 0 0 106 -3,-2.4 2,-0.3 -6,-0.3 0, 0.0 -0.726 120.3 -70.4-115.0 169.0 6.6 -20.1 -4.1 34 34 S P + 0 0 122 0, 0.0 2,-0.3 0, 0.0 -2,-0.1 -0.440 55.4 161.0 -76.4 126.5 9.2 -17.4 -3.1 35 35 S V - 0 0 34 -2,-0.3 2,-0.7 -4,-0.2 3,-0.1 -0.970 22.0-158.3-142.7 124.1 8.0 -14.4 -1.1 36 36 S I > - 0 0 103 -2,-0.3 4,-1.8 1,-0.2 3,-0.5 -0.843 7.4-173.6-111.0 99.9 10.4 -12.1 0.9 37 37 S A H > S+ 0 0 54 -2,-0.7 4,-1.8 1,-0.3 -1,-0.2 0.807 88.9 56.0 -56.2 -32.3 8.5 -10.1 3.6 38 38 S E H > S+ 0 0 144 2,-0.2 4,-2.5 3,-0.1 -1,-0.3 0.908 105.9 49.2 -63.5 -44.6 11.8 -8.3 4.2 39 39 S A H > S+ 0 0 29 -3,-0.5 4,-2.2 2,-0.2 5,-0.2 0.980 112.5 44.4 -66.6 -57.3 12.2 -7.2 0.6 40 40 S V H X S+ 0 0 26 -4,-1.8 4,-1.7 1,-0.2 -1,-0.2 0.892 114.7 50.9 -49.3 -47.6 8.7 -5.8 0.2 41 41 S E H < S+ 0 0 82 -4,-1.8 -1,-0.2 -5,-0.3 -2,-0.2 0.916 114.9 42.4 -57.9 -44.4 8.9 -4.1 3.6 42 42 S R H < S+ 0 0 158 -4,-2.5 -1,-0.2 1,-0.2 -2,-0.2 0.690 106.8 62.1 -78.3 -21.5 12.3 -2.5 2.7 43 43 S E H < S+ 0 0 117 -4,-2.2 -1,-0.2 -5,-0.2 -2,-0.2 0.846 89.9 81.9 -70.4 -34.8 11.1 -1.6 -0.8 44 44 S Q S < S- 0 0 7 -4,-1.7 2,-0.4 -5,-0.2 5,-0.1 -0.567 98.7-108.4 -71.5 128.5 8.5 0.6 0.8 45 45 S P > - 0 0 41 0, 0.0 3,-2.2 0, 0.0 7,-0.1 -0.455 18.8-137.6 -61.1 118.7 10.0 4.0 1.7 46 46 S E G > S+ 0 0 151 -2,-0.4 3,-2.3 1,-0.3 4,-0.3 0.734 97.6 75.8 -44.6 -31.7 10.3 4.2 5.6 47 47 S H G 3 S+ 0 0 161 1,-0.3 -1,-0.3 2,-0.1 3,-0.2 0.884 107.9 28.5 -47.5 -48.2 8.9 7.8 5.3 48 48 S L G X> S+ 0 0 41 -3,-2.2 3,-1.7 1,-0.2 4,-1.0 -0.065 81.2 137.7-104.3 29.1 5.4 6.5 4.7 49 49 S R H <> + 0 0 149 -3,-2.3 4,-1.9 1,-0.3 3,-0.4 0.839 68.4 60.5 -49.2 -38.2 5.9 3.2 6.6 50 50 S S H 3> S+ 0 0 83 -4,-0.3 4,-3.1 -3,-0.2 5,-0.3 0.893 97.1 59.9 -52.4 -43.6 2.5 3.6 8.2 51 51 S W H <> S+ 0 0 71 -3,-1.7 4,-2.8 1,-0.2 -1,-0.2 0.889 104.5 49.2 -54.7 -42.7 0.9 3.5 4.7 52 52 S F H X S+ 0 0 7 -4,-1.0 4,-2.0 -3,-0.4 -1,-0.2 0.929 112.8 48.0 -62.2 -43.7 2.4 0.0 4.2 53 53 S R H X S+ 0 0 129 -4,-1.9 4,-1.5 2,-0.2 -2,-0.2 0.956 114.6 43.5 -61.0 -53.1 1.0 -1.1 7.5 54 54 S E H X S+ 0 0 117 -4,-3.1 4,-1.5 1,-0.3 3,-0.3 0.929 116.0 48.2 -59.3 -48.5 -2.5 0.3 6.9 55 55 S R H X S+ 0 0 94 -4,-2.8 4,-3.0 -5,-0.3 -1,-0.3 0.832 101.3 67.1 -61.3 -31.2 -2.6 -1.0 3.4 56 56 S L H X S+ 0 0 7 -4,-2.0 4,-2.3 1,-0.2 -1,-0.2 0.933 99.7 48.8 -57.3 -45.4 -1.4 -4.4 4.7 57 57 S I H X S+ 0 0 107 -4,-1.5 4,-2.4 -3,-0.3 -1,-0.2 0.930 111.8 50.3 -58.1 -43.1 -4.7 -4.8 6.5 58 58 S A H X S+ 0 0 28 -4,-1.5 4,-2.2 1,-0.2 -2,-0.2 0.926 112.7 45.5 -59.2 -44.9 -6.5 -3.9 3.3 59 59 S H H X S+ 0 0 28 -4,-3.0 4,-1.6 2,-0.2 -1,-0.2 0.791 106.7 59.6 -71.8 -26.1 -4.4 -6.4 1.3 60 60 S R H X S+ 0 0 103 -4,-2.3 4,-2.8 -5,-0.3 3,-0.4 0.959 106.3 47.8 -63.3 -47.3 -4.9 -9.0 4.0 61 61 S L H X S+ 0 0 113 -4,-2.4 4,-2.4 1,-0.3 -2,-0.2 0.936 112.7 49.1 -54.5 -47.7 -8.7 -8.7 3.4 62 62 S A H X S+ 0 0 27 -4,-2.2 4,-0.6 1,-0.2 -1,-0.3 0.765 112.0 49.5 -66.6 -24.7 -8.0 -9.0 -0.3 63 63 S S H >< S+ 0 0 11 -4,-1.6 3,-0.7 -3,-0.4 -2,-0.2 0.939 113.3 43.2 -78.0 -46.0 -5.8 -12.1 0.2 64 64 S V H 3< S+ 0 0 97 -4,-2.8 -2,-0.2 1,-0.2 -3,-0.2 0.811 106.5 61.8 -71.2 -29.5 -8.3 -13.9 2.4 65 65 S N H 3< S- 0 0 70 -4,-2.4 2,-2.6 -5,-0.3 -1,-0.2 0.823 80.4-170.4 -61.4 -31.3 -11.2 -13.0 0.2 66 66 S L << + 0 0 121 -3,-0.7 -1,-0.2 -4,-0.6 -2,-0.1 -0.357 64.3 87.9 71.2 -55.0 -9.4 -15.0 -2.6 67 67 S S + 0 0 77 -2,-2.6 -1,-0.2 1,-0.2 -5,-0.1 0.846 42.1 152.0 -32.9 -77.8 -12.0 -13.6 -5.1 68 68 S R S S- 0 0 158 1,-0.2 -1,-0.2 2,-0.0 -2,-0.1 0.361 75.8 -92.0 64.7 -9.1 -10.1 -10.3 -6.0 69 69 S L - 0 0 132 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 0.972 57.7-170.7 53.1 94.3 -11.9 -10.5 -9.5 70 70 S P - 0 0 84 0, 0.0 -2,-0.0 0, 0.0 -3,-0.0 0.398 46.0 -59.9 -79.1-136.3 -9.3 -12.4 -11.6 71 71 S Y S S+ 0 0 206 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.954 72.5 151.2 -69.1 -84.5 -9.7 -12.8 -15.4 72 72 S E - 0 0 79 -3,-0.0 0, 0.0 0, 0.0 0, 0.0 0.244 51.6-105.1 59.6 161.2 -13.0 -14.6 -16.0 73 73 S P + 0 0 96 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.661 57.9 140.4 -76.3-113.7 -15.1 -14.0 -19.2 74 74 S K + 0 0 167 1,-0.2 2,-0.3 0, 0.0 0, 0.0 0.959 22.7 156.8 67.0 93.7 -18.2 -11.8 -18.5 75 75 S L 0 0 173 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 -0.978 360.0 360.0-149.0 147.7 -18.7 -9.3 -21.4 76 76 S K 0 0 238 -2,-0.3 0, 0.0 0, 0.0 0, 0.0 -0.636 360.0 360.0 -90.1 360.0 -21.7 -7.5 -22.7