==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 04-DEC-98 1B22 . COMPND 2 MOLECULE: DNA REPAIR PROTEIN RAD51; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.AIHARA,Y.ITO,H.KURUMIZAKA,S.YOKOYAMA,T.SHIBATA,RIKEN . 70 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4397.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 47 67.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 11.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 27 38.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 7 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 16 A E 0 0 152 0, 0.0 2,-0.4 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 153.7 -11.0 -8.9 4.5 2 17 A E - 0 0 172 1,-0.1 55,-0.0 59,-0.0 0, 0.0 -0.985 360.0 -27.5-140.8 129.9 -8.6 -9.3 1.6 3 18 A E S S- 0 0 85 -2,-0.4 2,-0.3 1,-0.1 -1,-0.1 -0.090 76.4-104.3 60.0-167.9 -7.4 -6.8 -0.9 4 19 A S - 0 0 26 2,-0.1 -1,-0.1 -3,-0.1 57,-0.0 -0.993 21.6-166.0-155.7 147.1 -9.6 -3.8 -1.7 5 20 A F S S+ 0 0 206 -2,-0.3 3,-0.1 2,-0.0 -1,-0.0 0.094 74.1 62.8-121.6 22.7 -11.9 -2.6 -4.5 6 21 A G S S- 0 0 36 1,-0.3 2,-0.1 63,-0.0 -2,-0.1 0.030 100.8 -24.8-116.5-134.2 -12.4 1.0 -3.5 7 22 A P - 0 0 55 0, 0.0 -1,-0.3 0, 0.0 60,-0.1 -0.438 42.9-166.9 -80.9 156.2 -10.0 4.0 -3.2 8 23 A Q + 0 0 2 -2,-0.1 2,-4.3 -3,-0.1 28,-0.4 -0.052 26.7 151.7-136.9 39.0 -6.3 3.4 -2.5 9 24 A P > + 0 0 37 0, 0.0 4,-0.5 0, 0.0 3,-0.3 -0.229 14.5 152.2 -67.1 60.6 -5.0 6.9 -1.5 10 25 A I H >> + 0 0 0 -2,-4.3 4,-1.9 1,-0.2 5,-1.0 0.573 40.5 101.5 -71.0 -4.7 -2.4 5.1 0.5 11 26 A S H >>S+ 0 0 31 1,-0.2 4,-2.5 -3,-0.2 5,-0.8 0.940 86.1 34.8 -43.4 -78.3 -0.2 8.2 -0.0 12 27 A R H >5S+ 0 0 184 -3,-0.3 4,-0.7 3,-0.2 -1,-0.2 0.844 117.3 62.1 -48.9 -32.0 -0.7 9.8 3.4 13 28 A L H <5S+ 0 0 19 -4,-0.5 4,-0.3 2,-0.1 -2,-0.2 0.989 127.6 2.2 -59.8 -78.0 -0.8 6.3 4.8 14 29 A E H >X5S+ 0 0 0 -4,-1.9 3,-0.8 3,-0.2 4,-0.6 0.800 128.2 64.1 -83.5 -28.3 2.7 4.9 4.0 15 30 A Q H 3< S- 0 0 94 36,-0.1 4,-0.6 3,-0.1 3,-0.2 0.365 99.3 -42.7 -80.2-140.4 4.9 0.6 8.8 20 35 A A H > S+ 0 0 38 1,-0.2 4,-1.9 2,-0.1 5,-0.5 0.827 124.4 82.5 -60.2 -29.0 7.6 -1.0 6.6 21 36 A N H >>S+ 0 0 0 1,-0.2 4,-1.6 2,-0.2 5,-0.9 0.919 82.8 54.0 -39.8 -76.9 5.7 0.2 3.5 22 37 A D H >>S+ 0 0 43 1,-0.2 4,-0.6 3,-0.2 5,-0.6 0.837 112.1 48.0 -26.6 -59.2 7.0 3.8 3.4 23 38 A V H X5S+ 0 0 80 -4,-0.6 4,-0.6 3,-0.1 5,-0.2 0.971 136.5 4.8 -50.5 -70.4 10.5 2.4 3.4 24 39 A K H X5S+ 0 0 70 -4,-1.9 4,-0.9 3,-0.2 5,-0.4 0.910 124.2 62.8 -88.0 -46.2 10.1 -0.2 0.7 25 40 A K H <>S+ 0 0 1 -4,-1.6 6,-1.4 -5,-0.5 5,-0.7 0.935 121.4 23.2 -46.7 -53.8 6.6 0.2 -0.6 26 41 A L H < S- 0 0 40 -2,-4.2 3,-2.4 -23,-0.1 -3,-0.0 -0.980 122.7 -36.9 171.4-177.6 -0.4 6.3 -3.3 34 49 A V G > S+ 0 0 68 1,-0.3 3,-2.7 -2,-0.3 -3,-0.1 0.759 105.5 98.0 -35.5 -27.8 -3.5 4.9 -5.1 35 50 A E G >> + 0 0 58 1,-0.3 3,-1.6 -5,-0.2 4,-0.5 0.785 58.9 86.3 -36.4 -29.3 -0.8 3.0 -7.1 36 51 A A G <4 S+ 0 0 1 -3,-2.4 6,-0.6 -28,-0.4 -1,-0.3 0.898 110.4 12.1 -42.6 -45.9 -1.7 0.2 -4.7 37 52 A V B <4 S+A 41 0A 67 -3,-2.7 -1,-0.3 4,-0.1 -2,-0.2 -0.357 109.7 86.6-131.4 57.4 -4.5 -0.8 -7.1 38 53 A A T <4 S- 0 0 46 -3,-1.6 -3,-0.1 2,-0.5 -2,-0.1 0.711 108.5 -15.8-117.8 -61.7 -3.9 1.1 -10.3 39 54 A Y S < S+ 0 0 205 -4,-0.5 -3,-0.1 1,-0.3 -4,-0.0 0.745 128.5 35.5-114.9 -49.3 -1.5 -0.8 -12.6 40 55 A A S S- 0 0 32 -5,-0.4 -2,-0.5 2,-0.0 -1,-0.3 -0.875 83.0-113.9-112.4 144.8 0.2 -3.5 -10.6 41 56 A P B >> -A 37 0A 63 0, 0.0 3,-4.2 0, 0.0 4,-1.3 -0.459 31.4-112.3 -72.3 140.3 -1.3 -5.5 -7.7 42 57 A K H 3> S+ 0 0 8 -6,-0.6 4,-2.0 1,-0.3 5,-0.3 0.819 120.5 65.2 -43.3 -28.4 0.3 -4.9 -4.3 43 58 A K H 3> S+ 0 0 110 1,-0.2 4,-0.7 2,-0.2 -1,-0.3 0.793 102.2 47.8 -68.0 -23.7 1.6 -8.4 -4.6 44 59 A E H <4 S+ 0 0 112 -3,-4.2 4,-0.3 2,-0.2 -2,-0.2 0.935 111.8 45.7 -83.4 -49.3 3.7 -7.3 -7.6 45 60 A L H >< S+ 0 0 5 -4,-1.3 3,-3.8 1,-0.2 5,-0.3 0.990 111.6 52.1 -56.8 -59.1 5.2 -4.2 -6.0 46 61 A I H 3X>S+ 0 0 4 -4,-2.0 4,-2.2 1,-0.3 5,-1.8 0.868 90.7 78.7 -46.6 -35.0 6.0 -6.0 -2.8 47 62 A N T 3<5S+ 0 0 114 -4,-0.7 -1,-0.3 -5,-0.3 -2,-0.2 0.738 80.0 78.7 -49.5 -15.2 7.7 -8.6 -5.0 48 63 A I T <45S+ 0 0 75 -3,-3.8 -2,-0.1 -4,-0.3 -1,-0.1 0.931 110.2 14.1 -58.5 -90.4 10.5 -6.0 -5.0 49 64 A K T 45S- 0 0 133 -4,-0.2 -1,-0.2 1,-0.1 -2,-0.2 0.791 122.7 -99.1 -56.7 -21.9 12.3 -6.5 -1.7 50 65 A G T <5S+ 0 0 55 -4,-2.2 -3,-0.2 -5,-0.3 -1,-0.1 0.606 83.2 126.6 112.3 18.5 10.3 -9.8 -1.6 51 66 A I < + 0 0 33 -5,-1.8 2,-0.3 -6,-0.2 -5,-0.0 0.351 28.9 174.8 -81.7-140.3 7.4 -8.8 0.7 52 67 A S S > S- 0 0 25 -6,-0.1 4,-1.3 -5,-0.0 5,-0.5 -0.898 71.3 -4.1 168.0-134.4 3.7 -9.2 -0.1 53 68 A E T 4>S+ 0 0 89 -2,-0.3 5,-1.3 3,-0.2 6,-0.2 0.761 113.9 92.4 -56.5 -16.9 0.6 -8.5 2.0 54 69 A A T >5S- 0 0 60 3,-0.2 4,-1.1 1,-0.2 -1,-0.2 0.924 110.7 -2.3 -40.5 -80.3 3.2 -7.8 4.7 55 70 A K H >5S+ 0 0 9 -3,-0.3 4,-1.2 2,-0.2 -1,-0.2 0.909 137.0 56.9 -83.3 -44.0 3.5 -4.1 4.1 56 71 A A H >X5S+ 0 0 0 -4,-1.3 4,-1.6 1,-0.2 3,-1.6 0.976 111.6 41.1 -51.3 -62.4 1.1 -3.8 1.2 57 72 A D H 3>5S+ 0 0 42 -5,-0.5 4,-2.2 1,-0.3 5,-0.4 0.952 105.6 64.0 -52.8 -51.8 -1.8 -5.3 3.1 58 73 A K H 3XX S+ 0 0 1 -4,-3.7 4,-4.7 2,-0.2 3,-2.4 0.992 105.6 49.6 -68.9 -59.6 -6.1 3.1 4.8 64 79 A A H 3< S+ 0 0 35 -4,-1.1 -1,-0.2 -5,-0.4 -2,-0.2 0.801 116.1 47.0 -50.7 -25.9 -9.6 1.9 3.7 65 80 A K H 3< S+ 0 0 162 -4,-1.1 -1,-0.3 2,-0.1 -2,-0.2 0.570 127.1 25.6 -93.9 -8.2 -10.5 2.2 7.4 66 81 A L H << S+ 0 0 139 -3,-2.4 -2,-0.2 -4,-0.5 -3,-0.2 0.600 127.3 39.9-125.0 -24.6 -9.0 5.6 7.9 67 82 A V S < S+ 0 0 33 -4,-4.7 2,-0.4 -5,-0.2 -2,-0.1 -0.374 71.5 165.0-125.3 57.3 -9.1 7.2 4.4 68 83 A P - 0 0 75 0, 0.0 2,-0.3 0, 0.0 -4,-0.1 -0.586 69.5 -57.0 -75.5 124.1 -12.4 6.1 3.0 69 84 A M 0 0 177 -2,-0.4 -61,-0.0 1,-0.2 -63,-0.0 -0.099 360.0 360.0 41.0 -94.4 -13.4 8.2 -0.1 70 85 A G 0 0 119 -2,-0.3 -1,-0.2 0, 0.0 -3,-0.0 0.404 360.0 360.0 136.4 360.0 -13.2 11.6 1.7