==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 11-DEC-98 1B3I . COMPND 2 MOLECULE: PROTEIN (PLASTOCYANIN); . SOURCE 2 ORGANISM_SCIENTIFIC: PROCHLOROTHRIX HOLLANDICA; . AUTHOR C.R.BABU,B.F.VOLKMAN,G.S.BULLERJAHN . 97 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5355.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 59.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 11 11.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 23 23.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 13.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 95 0, 0.0 23,-0.1 0, 0.0 2,-0.1 0.000 360.0 360.0 360.0 162.0 14.5 -1.6 7.2 2 2 A S - 0 0 106 25,-0.1 2,-0.2 27,-0.1 27,-0.2 -0.341 360.0-179.7 -57.6 126.8 13.3 -0.6 3.7 3 3 A V E -a 29 0A 41 25,-2.0 27,-2.8 -2,-0.1 2,-0.3 -0.672 16.0-141.1-122.4 177.2 10.2 -2.5 2.8 4 4 A Q E -a 30 0A 105 25,-0.2 2,-0.6 -2,-0.2 27,-0.3 -0.985 7.1-138.6-143.0 150.8 7.9 -2.7 -0.2 5 5 A I E -a 31 0A 0 25,-1.8 27,-2.6 -2,-0.3 2,-0.4 -0.942 18.0-159.3-115.3 112.1 4.2 -3.1 -0.8 6 6 A K E -aB 32 17A 86 11,-4.2 11,-3.6 -2,-0.6 2,-0.8 -0.759 6.8-148.4 -92.7 133.4 3.2 -5.5 -3.6 7 7 A M E +aB 33 16A 0 25,-2.1 27,-1.7 -2,-0.4 28,-1.5 -0.841 67.1 15.5-105.7 97.0 -0.2 -5.1 -5.1 8 8 A G E S- 0 0 0 7,-3.1 2,-0.3 -2,-0.8 9,-0.1 -0.105 72.9-113.6 118.1 144.5 -1.5 -8.4 -6.3 9 9 A T E >> - B 0 13A 12 4,-2.9 3,-0.6 -2,-0.1 4,-0.5 -0.704 29.6-109.9-108.1 160.6 -0.6 -12.1 -5.7 10 10 A D T 34 S+ 0 0 143 1,-0.3 2,-0.2 -2,-0.3 -1,-0.1 0.674 115.2 74.2 -59.8 -16.0 0.8 -14.6 -8.1 11 11 A K T 34 S- 0 0 187 2,-0.2 -1,-0.3 1,-0.1 -2,-0.1 -0.174 119.6-108.6 -90.6 39.7 -2.6 -16.2 -7.7 12 12 A Y T <4 S+ 0 0 183 -3,-0.6 -2,-0.2 -2,-0.2 -1,-0.1 0.753 78.2 142.7 38.3 29.7 -4.1 -13.4 -9.9 13 13 A A E < -B 9 0A 28 -4,-0.5 -4,-2.9 2,-0.1 2,-1.2 -0.901 53.1-136.1-104.9 117.7 -5.5 -12.2 -6.6 14 14 A P E + 0 0 23 0, 0.0 2,-0.3 0, 0.0 68,-0.1 -0.599 54.3 128.5 -75.0 97.7 -5.6 -8.5 -6.1 15 15 A L E - 0 0 51 -2,-1.2 -7,-3.1 75,-0.1 2,-0.4 -0.989 62.7-100.4-150.8 151.2 -4.4 -8.1 -2.5 16 16 A Y E -B 7 0A 0 -2,-0.3 -9,-0.2 -9,-0.2 75,-0.1 -0.608 47.5-124.8 -77.4 126.2 -1.8 -6.1 -0.7 17 17 A E E S+B 6 0A 91 -11,-3.6 -11,-4.2 -2,-0.4 2,-0.1 -0.992 95.4 29.8-130.5 134.9 1.3 -8.0 0.1 18 18 A P S S- 0 0 60 0, 0.0 75,-0.4 0, 0.0 -1,-0.3 0.421 83.9-150.0 -75.1 141.0 2.6 -8.5 2.5 19 19 A K S S+ 0 0 145 73,-0.1 74,-1.2 -2,-0.1 2,-0.4 0.835 88.3 35.9 -40.2 -40.1 -0.9 -8.2 4.0 20 20 A A E S-d 93 0B 71 72,-0.2 2,-0.3 2,-0.0 74,-0.2 -0.915 72.5-176.2-120.2 146.3 0.9 -6.9 7.0 21 21 A L E -d 94 0B 15 72,-0.5 74,-2.1 -2,-0.4 2,-0.4 -0.998 4.8-165.6-143.3 141.4 4.0 -4.7 7.2 22 22 A S E +d 95 0B 78 -2,-0.3 2,-0.3 72,-0.2 74,-0.2 -0.972 17.9 149.7-130.0 143.8 6.1 -3.4 10.0 23 23 A I E -d 96 0B 5 72,-2.1 74,-3.2 -2,-0.4 2,-0.3 -0.881 35.7-105.1-154.9-177.5 8.8 -0.7 10.2 24 24 A S > - 0 0 55 73,-0.3 3,-3.1 72,-0.3 2,-0.6 -0.838 48.8 -79.2-120.6 158.3 10.4 1.9 12.4 25 25 A A T 3 S+ 0 0 59 -2,-0.3 48,-0.3 1,-0.3 3,-0.1 -0.395 124.8 29.3 -58.1 105.4 10.1 5.7 12.6 26 26 A G T 3 S+ 0 0 48 46,-1.2 -1,-0.3 -2,-0.6 47,-0.2 0.237 95.1 117.8 124.5 -7.4 12.4 6.7 9.7 27 27 A D < - 0 0 28 -3,-3.1 45,-2.5 44,-0.1 -1,-0.4 -0.249 57.2-125.0 -82.1 174.2 11.9 3.6 7.6 28 28 A T E - C 0 71A 34 43,-0.2 -25,-2.0 -3,-0.1 2,-0.5 -0.888 8.4-153.2-123.6 154.3 10.5 3.6 4.1 29 29 A V E -aC 3 70A 1 41,-2.6 41,-0.6 -2,-0.3 -25,-0.2 -0.903 15.8-164.1-131.4 102.6 7.6 1.7 2.5 30 30 A E E -aC 4 69A 66 -27,-2.8 -25,-1.8 -2,-0.5 2,-0.3 -0.260 5.2-148.4 -78.8 169.5 7.8 1.1 -1.3 31 31 A F E +aC 5 68A 2 37,-0.9 37,-0.7 -27,-0.3 2,-0.3 -0.946 16.5 174.9-147.2 121.4 5.0 0.1 -3.5 32 32 A V E -a 6 0A 19 -27,-2.6 -25,-2.1 -2,-0.3 2,-0.6 -0.890 30.7-118.0-125.0 155.3 5.0 -2.1 -6.6 33 33 A M E +a 7 0A 20 -2,-0.3 -25,-0.1 -27,-0.2 32,-0.1 -0.844 25.8 178.1 -98.0 119.2 2.3 -3.5 -8.9 34 34 A N - 0 0 54 -27,-1.7 2,-0.3 -2,-0.6 -26,-0.2 0.972 54.7 -69.1 -79.3 -66.0 2.2 -7.2 -9.1 35 35 A K S S+ 0 0 60 -28,-1.5 -1,-0.3 1,-0.2 -25,-0.0 -0.903 99.4 75.4-168.9-167.5 -0.8 -7.7 -11.3 36 36 A V S S- 0 0 41 -2,-0.3 -1,-0.2 -3,-0.1 -2,-0.1 0.924 91.4-156.7 46.0 54.9 -4.6 -7.4 -11.6 37 37 A G + 0 0 42 -3,-0.1 2,-0.2 25,-0.1 -1,-0.1 -0.188 65.6 81.3 -93.0-172.3 -4.2 -3.7 -12.0 38 38 A P + 0 0 49 0, 0.0 2,-0.2 0, 0.0 24,-0.1 0.628 60.6 171.8 -75.0-168.9 -4.4 -0.9 -12.1 39 39 A H + 0 0 0 22,-0.4 22,-0.5 -2,-0.2 2,-0.3 -0.748 12.4 179.2-144.2-170.4 -3.8 0.1 -8.5 40 40 A N - 0 0 3 -2,-0.2 2,-0.7 20,-0.2 18,-0.1 -0.925 36.4 -91.8 174.0 167.0 -3.2 3.0 -6.3 41 41 A V B +G 57 0C 2 16,-1.2 16,-1.2 -2,-0.3 2,-0.3 -0.895 41.8 161.7-104.1 114.4 -2.5 4.2 -2.7 42 42 A I E -E 81 0B 16 39,-1.0 39,-0.6 -2,-0.7 10,-0.1 -0.659 24.0-157.2-132.8 76.0 -5.7 5.0 -0.8 43 43 A F E -E 80 0B 9 9,-0.3 37,-0.3 -2,-0.3 3,-0.1 0.037 10.0-145.6 -47.7 160.6 -4.9 5.0 2.9 44 44 A D E - 0 0 93 35,-3.7 2,-0.2 1,-0.2 36,-0.2 0.850 60.9 -57.5 -97.0 -50.0 -7.7 4.4 5.3 45 45 A K E -E 79 0B 147 34,-1.3 34,-0.9 7,-0.1 -1,-0.2 -0.728 45.3-150.6 167.3 143.6 -6.6 6.6 8.2 46 46 A V - 0 0 25 -2,-0.2 3,-0.1 32,-0.2 32,-0.1 -0.894 26.9-102.5-128.5 158.1 -3.7 7.0 10.6 47 47 A P > - 0 0 63 0, 0.0 3,-1.4 0, 0.0 5,-0.1 -0.270 64.5 -56.8 -75.0 164.2 -3.3 8.2 14.2 48 48 A A T 3 S+ 0 0 100 1,-0.2 3,-0.1 3,-0.1 0, 0.0 -0.052 118.7 54.7 -40.2 135.6 -1.9 11.7 15.1 49 49 A G T 3 S+ 0 0 58 1,-0.5 -1,-0.2 -3,-0.1 2,-0.2 -0.405 103.6 41.2 133.5 -56.5 1.5 12.1 13.5 50 50 A E S < S- 0 0 50 -3,-1.4 -1,-0.5 25,-0.1 2,-0.3 -0.429 75.8-119.1-111.1-173.3 1.1 11.4 9.9 51 51 A S >> + 0 0 66 -2,-0.2 4,-1.7 1,-0.1 3,-0.6 -0.675 31.5 167.8-133.2 77.8 -1.6 12.3 7.2 52 52 A A H 3> S+ 0 0 0 1,-0.3 2,-2.5 -2,-0.3 4,-1.3 0.936 79.5 59.8 -53.0 -51.8 -3.1 9.1 5.9 53 53 A P H 34 S+ 0 0 93 0, 0.0 -1,-0.3 0, 0.0 -11,-0.0 -0.235 111.5 42.0 -75.0 50.8 -5.8 11.1 4.2 54 54 A A H <4 S+ 0 0 67 -2,-2.5 -2,-0.2 -3,-0.6 -4,-0.0 0.286 101.5 59.4-157.3 -45.7 -3.2 13.0 2.2 55 55 A L H < S+ 0 0 53 -4,-1.7 -14,-0.1 -3,-0.3 -3,-0.1 0.784 76.8 116.8 -66.1 -27.6 -0.6 10.5 1.0 56 56 A S < - 0 0 34 -4,-1.3 2,-0.6 -5,-0.2 -14,-0.2 -0.208 54.4-159.5 -46.5 115.1 -3.4 8.7 -0.8 57 57 A N B -G 41 0C 70 -16,-1.2 -16,-1.2 1,-0.1 -1,-0.1 -0.919 17.8-169.6-108.0 117.7 -2.4 9.0 -4.4 58 58 A T + 0 0 103 -2,-0.6 2,-1.8 -18,-0.1 -1,-0.1 0.094 52.7 120.2 -89.8 21.9 -5.2 8.6 -6.9 59 59 A K - 0 0 156 -18,-0.1 -1,-0.1 2,-0.0 -20,-0.1 -0.466 60.3-151.2 -86.0 64.4 -2.7 8.5 -9.7 60 60 A L - 0 0 87 -2,-1.8 2,-1.2 1,-0.1 -20,-0.2 -0.125 9.4-142.8 -40.4 102.5 -3.7 5.0 -10.8 61 61 A A + 0 0 24 -22,-0.5 -22,-0.4 1,-0.2 -1,-0.1 -0.646 26.6 175.3 -78.5 98.5 -0.3 3.9 -12.2 62 62 A I + 0 0 105 -2,-1.2 -1,-0.2 -24,-0.1 -25,-0.1 0.923 59.2 85.4 -68.7 -46.1 -1.3 1.8 -15.2 63 63 A A S S- 0 0 83 -3,-0.2 3,-0.4 1,-0.1 2,-0.2 -0.451 82.3-137.4 -62.1 111.6 2.3 1.3 -16.2 64 64 A P + 0 0 101 0, 0.0 -2,-0.1 0, 0.0 -1,-0.1 -0.506 67.4 82.9 -75.0 139.2 3.4 -1.8 -14.2 65 65 A G S S- 0 0 51 -2,-0.2 2,-0.1 -32,-0.1 -2,-0.0 -0.259 100.2 -26.8 168.9 -68.0 6.8 -1.6 -12.7 66 66 A S - 0 0 59 -3,-0.4 -34,-0.2 -34,-0.2 3,-0.1 -0.456 46.4-154.8-178.7 97.4 7.0 0.2 -9.4 67 67 A F - 0 0 29 -36,-0.2 2,-0.3 1,-0.2 -35,-0.2 0.905 56.2 -77.7 -38.2 -86.7 4.6 3.0 -8.3 68 68 A Y E -C 31 0A 56 -37,-0.7 -37,-0.9 -39,-0.1 2,-0.3 -0.970 34.6-109.3-171.5 175.1 6.8 4.8 -5.8 69 69 A S E -C 30 0A 62 -2,-0.3 2,-0.3 -39,-0.2 -39,-0.2 -0.805 21.7-170.6-119.6 161.3 8.2 4.9 -2.3 70 70 A V E -C 29 0A 37 -41,-0.6 -41,-2.6 -2,-0.3 2,-0.3 -0.975 16.6-133.7-154.1 137.7 7.6 7.0 0.7 71 71 A T E -C 28 0A 87 -2,-0.3 -43,-0.2 -43,-0.2 2,-0.2 -0.687 22.0-166.3 -94.2 146.5 9.3 7.5 4.1 72 72 A L + 0 0 11 -45,-2.5 -46,-1.2 -2,-0.3 -48,-0.1 -0.732 23.2 165.9-124.1 173.1 7.4 7.5 7.4 73 73 A G + 0 0 33 -48,-0.3 -48,-0.1 -2,-0.2 -1,-0.1 0.356 44.9 106.5-153.1 -44.3 8.2 8.5 10.9 74 74 A T S S- 0 0 24 -25,-0.1 2,-0.2 1,-0.1 -1,-0.1 -0.284 70.7-124.4 -53.3 124.1 5.0 8.8 12.9 75 75 A P + 0 0 93 0, 0.0 2,-0.3 0, 0.0 22,-0.2 -0.487 65.0 67.7 -75.0 141.5 4.7 5.8 15.3 76 76 A G S S- 0 0 27 20,-0.3 20,-1.9 -2,-0.2 2,-0.6 -0.823 85.5 -58.7 141.1-178.6 1.6 3.7 15.0 77 77 A T E - F 0 95B 75 -2,-0.3 2,-0.4 18,-0.2 18,-0.3 -0.896 45.3-156.0-104.8 120.1 -0.3 1.3 12.8 78 78 A Y E - F 0 94B 0 16,-4.6 16,-2.6 -2,-0.6 2,-0.4 -0.751 6.4-162.4 -96.8 140.7 -1.3 2.6 9.4 79 79 A S E +EF 45 93B 40 -34,-0.9 -35,-3.7 -2,-0.4 -34,-1.3 -0.941 15.8 158.7-123.9 145.1 -4.1 1.2 7.4 80 80 A F E -EF 43 92B 3 12,-1.4 12,-0.7 -2,-0.4 2,-0.3 -0.778 14.7-161.9-146.2-171.5 -5.0 1.5 3.7 81 81 A Y E -EF 42 91B 70 -39,-0.6 -39,-1.0 -2,-0.2 2,-0.6 -0.971 31.8 -91.6-171.9 165.4 -6.9 -0.1 0.9 82 82 A C - 0 0 0 8,-1.2 8,-0.2 3,-0.6 7,-0.1 -0.812 24.9-148.2 -93.5 122.3 -7.3 -0.3 -2.9 83 83 A T S S+ 0 0 64 -2,-0.6 3,-0.4 1,-0.1 -1,-0.2 0.922 100.5 28.3 -51.3 -50.8 -9.8 2.1 -4.3 84 84 A P S > S+ 0 0 63 0, 0.0 2,-3.0 0, 0.0 3,-0.7 0.979 121.1 50.7 -75.1 -62.5 -10.7 -0.3 -7.1 85 85 A H T 3 >S+ 0 0 25 1,-0.2 5,-1.1 2,-0.1 -3,-0.6 -0.316 75.9 121.5 -75.0 58.0 -9.9 -3.7 -5.4 86 86 A R T 3 5S+ 0 0 200 -2,-3.0 -1,-0.2 -3,-0.4 3,-0.2 0.831 80.5 32.4 -88.0 -38.5 -12.0 -2.6 -2.4 87 87 A G T < 5S+ 0 0 73 -3,-0.7 -2,-0.1 1,-0.2 -1,-0.1 0.699 106.4 71.1 -89.5 -23.8 -14.4 -5.5 -2.6 88 88 A A T 5S- 0 0 66 -4,-0.2 -1,-0.2 -6,-0.1 -2,-0.1 0.658 116.9-110.6 -65.7 -15.2 -11.9 -7.9 -3.9 89 89 A G T 5 + 0 0 46 -3,-0.2 2,-0.4 -7,-0.1 -3,-0.2 0.961 61.0 156.4 82.1 63.2 -10.4 -7.7 -0.4 90 90 A M < + 0 0 0 -5,-1.1 -8,-1.2 -8,-0.2 2,-0.3 -0.672 19.9 132.7-121.6 75.1 -7.2 -5.8 -0.9 91 91 A V E + F 0 81B 71 -2,-0.4 2,-0.2 -10,-0.2 -75,-0.2 -0.897 22.9 168.8-124.2 153.6 -6.3 -4.2 2.4 92 92 A G E - F 0 80B 5 -12,-0.7 -12,-1.4 -2,-0.3 2,-0.3 -0.818 19.8-130.1-147.5-174.8 -3.1 -4.1 4.3 93 93 A T E -dF 20 79B 50 -74,-1.2 -72,-0.5 -75,-0.4 2,-0.3 -0.947 5.3-156.5-143.8 162.1 -1.3 -2.4 7.3 94 94 A I E -dF 21 78B 1 -16,-2.6 -16,-4.6 -2,-0.3 2,-0.3 -0.956 8.1-160.1-146.7 122.6 1.9 -0.7 8.1 95 95 A T E -dF 22 77B 37 -74,-2.1 -72,-2.1 -2,-0.3 2,-0.3 -0.809 6.0-165.1-105.1 144.5 3.5 -0.3 11.5 96 96 A V E d 23 0B 0 -20,-1.9 -20,-0.3 -2,-0.3 -72,-0.3 -0.653 360.0 360.0-128.3 73.8 6.2 2.3 12.4 97 97 A E 0 0 186 -74,-3.2 -73,-0.3 -2,-0.3 -72,-0.2 0.878 360.0 360.0 -87.6 360.0 7.7 1.1 15.7