==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIBIOTIC 28-SEP-05 2B5B . COMPND 2 MOLECULE: DEFENSIN; . SOURCE 2 ORGANISM_SCIENTIFIC: CARETTA CARETTA; . AUTHOR S.CHATTOPADHYAY,N.K.SINHA,S.BANERJEE,D.ROY,D.CHATTOPADHYAY, . 36 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2734.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 19 52.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 5.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 2 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 19.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A E 0 0 218 0, 0.0 2,-0.4 0, 0.0 27,-0.1 0.000 360.0 360.0 360.0 86.7 -4.1 -3.4 -2.6 2 2 A K - 0 0 112 27,-0.1 2,-0.7 1,-0.0 27,-0.1 -0.748 360.0-159.9 -89.2 137.7 -2.2 -2.4 -5.9 3 3 A K - 0 0 154 -2,-0.4 3,-0.3 3,-0.0 5,-0.1 -0.698 43.3-163.0-109.1 78.7 -3.4 -3.7 -9.3 4 4 A a + 0 0 51 -2,-0.7 4,-0.0 1,-0.2 25,-0.0 -0.006 66.4 89.6 -79.7-179.0 -0.3 -3.2 -11.5 5 5 A P S S+ 0 0 122 0, 0.0 2,-0.4 0, 0.0 -1,-0.2 -0.939 123.5 7.6 -72.0 -26.7 1.8 -2.9 -14.0 6 6 A G S S+ 0 0 13 -3,-0.3 2,-0.3 25,-0.2 27,-0.1 -0.887 93.2 123.7-125.4 102.4 1.1 1.0 -13.9 7 7 A R + 0 0 86 -2,-0.4 23,-2.9 21,-0.1 26,-0.3 -0.941 19.3 143.1-153.6 127.4 -1.1 2.2 -10.8 8 8 A b S S- 0 0 0 2,-1.3 20,-2.4 -2,-0.3 25,-0.1 0.355 111.8 -39.6-120.7 -32.0 -1.2 4.6 -7.8 9 9 A T S S- 0 0 73 1,-0.7 2,-0.1 18,-0.2 24,-0.0 0.286 128.3 -28.2-116.7 -70.3 -4.9 5.2 -8.3 10 10 A L S S- 0 0 107 1,-0.2 -2,-1.3 -3,-0.2 -1,-0.7 -0.070 98.8 -45.1-110.0-146.3 -4.8 5.4 -12.2 11 11 A K S S- 0 0 132 -4,-0.2 -1,-0.2 22,-0.1 22,-0.1 -0.271 70.8 -62.4 -96.3 174.2 -1.8 6.4 -14.6 12 12 A c + 0 0 38 1,-0.1 22,-0.1 -2,-0.1 -1,-0.1 0.322 47.6 140.5 -69.6 175.0 0.8 9.5 -14.6 13 13 A G + 0 0 33 21,-0.2 3,-0.3 20,-0.2 11,-0.2 0.096 64.1 27.5-163.7 -88.9 0.9 13.4 -14.8 14 14 A K S S+ 0 0 133 9,-0.4 2,-0.9 20,-0.3 10,-0.3 0.984 129.3 4.2 -62.1 -92.1 3.1 15.9 -12.8 15 15 A H S S- 0 0 105 2,-0.0 9,-1.1 0, 0.0 8,-0.3 -0.739 85.8-144.0 -99.0 91.0 6.6 14.3 -11.7 16 16 A E + 0 0 127 -2,-0.9 18,-0.1 -3,-0.3 19,-0.0 -0.207 39.7 148.5 -76.8 112.9 6.2 10.9 -13.4 17 17 A R - 0 0 100 16,-0.1 2,-0.4 14,-0.1 16,-0.3 -0.972 46.5-103.6-147.1 150.9 7.8 8.3 -11.1 18 18 A P S S- 0 0 62 0, 0.0 2,-0.7 0, 0.0 13,-0.2 -0.664 85.4 -26.1 -83.2 125.5 8.1 4.6 -9.5 19 19 A T S S+ 0 0 89 11,-1.0 10,-0.3 -2,-0.4 12,-0.1 0.082 96.1 114.7 83.8 -23.3 6.9 3.7 -5.9 20 20 A L - 0 0 83 -2,-0.7 2,-0.9 10,-0.1 7,-0.3 -0.611 68.9-128.3 -83.2 134.6 7.1 7.1 -4.0 21 21 A P S S+ 0 0 98 0, 0.0 5,-0.3 0, 0.0 4,-0.1 -0.819 74.0 119.0 -72.1 101.2 4.0 9.0 -2.6 22 22 A Y S S- 0 0 65 -2,-0.9 3,-0.2 3,-0.8 4,-0.1 0.608 76.7 -42.0-136.3 -90.8 5.2 12.1 -4.5 23 23 A N S S+ 0 0 51 -8,-0.3 13,-2.8 -3,-0.2 -9,-0.4 0.376 129.4 37.4-151.9 -59.5 4.2 14.6 -7.3 24 24 A c B S+A 35 0A 0 -9,-1.1 -2,-0.6 11,-0.3 11,-0.4 -0.011 132.4 8.7 -70.4-155.3 2.8 12.1 -9.8 25 25 A G + 0 0 0 8,-0.5 -3,-0.8 9,-0.5 2,-0.3 0.188 54.6 179.7 -51.2 118.3 0.9 9.4 -7.6 26 26 A K + 0 0 112 9,-1.9 -1,-0.2 -5,-0.3 10,-0.1 -0.153 69.8 60.3 -88.6 39.0 0.5 10.2 -3.8 27 27 A Y S S- 0 0 103 -2,-0.3 2,-0.8 -7,-0.3 -18,-0.2 0.222 110.4 -15.8-140.2-122.2 -1.3 6.8 -3.3 28 28 A I S S- 0 0 61 -20,-2.4 2,-0.6 -27,-0.1 -21,-0.1 -0.599 80.9-145.8-100.8 89.4 -0.6 2.9 -3.8 29 29 A b + 0 0 9 -2,-0.8 -21,-0.2 -10,-0.3 4,-0.1 -0.327 46.2 140.9 -94.2 105.8 2.5 3.2 -6.1 30 30 A a S S- 0 0 26 -23,-2.9 -11,-1.0 -2,-0.6 3,-0.2 0.871 73.0 -77.9 -74.7-101.0 3.7 1.0 -9.0 31 31 A V S S+ 0 0 74 -13,-0.2 2,-1.5 -26,-0.1 -25,-0.2 0.426 123.0 57.2-149.4 -45.2 5.2 3.2 -12.0 32 32 A P S S+ 0 0 44 0, 0.0 2,-0.3 0, 0.0 -24,-0.3 -0.693 84.5 171.7 -77.8 76.4 2.4 4.8 -14.1 33 33 A V - 0 0 0 -2,-1.5 -8,-0.5 -16,-0.3 -20,-0.2 -0.678 31.2-120.9 -73.8 142.4 1.3 6.3 -10.7 34 34 A K - 0 0 73 -24,-0.5 -9,-0.5 -2,-0.3 -20,-0.3 0.908 48.5 -65.6 -53.9-113.7 -1.7 9.1 -10.6 35 35 A V B A 24 0A 49 -11,-0.4 -9,-1.9 -22,-0.1 -11,-0.3 -0.987 360.0 360.0-140.4 159.6 -1.0 12.7 -9.1 36 36 A K 0 0 131 -13,-2.8 -11,-0.1 -2,-0.3 -13,-0.1 -0.561 360.0 360.0 -66.1 360.0 -0.1 14.7 -5.8