==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GUANINE NUCLEOTIDE EXCHANGE FACTOR 20-JAN-99 1B64 . COMPND 2 MOLECULE: ELONGATION FACTOR 1-BETA; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR J.M.J.PEREZ,G.SIEGAL,J.KRIEK,K.HARD,J.DIJK,G.W.CANTERS, . 91 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5891.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 59 64.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 26 28.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 11.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 16.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 126 0, 0.0 3,-0.3 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 108.2 6.6 3.8 -3.3 2 2 A L - 0 0 164 1,-0.2 2,-0.4 2,-0.1 0, 0.0 0.963 360.0 -21.1 -49.0 -83.2 6.2 6.0 -0.2 3 3 A V S S- 0 0 89 3,-0.0 -1,-0.2 1,-0.0 3,-0.1 -0.881 119.2 -44.2-138.3 102.5 8.9 4.4 2.0 4 4 A A S S+ 0 0 60 -2,-0.4 2,-0.3 -3,-0.3 58,-0.2 0.907 102.9 132.9 39.0 61.7 10.0 0.8 1.2 5 5 A K - 0 0 39 55,-0.3 86,-0.4 56,-0.1 2,-0.3 -0.801 36.9-166.1-132.3 173.1 6.4 -0.2 0.7 6 6 A S E -A 59 0A 8 53,-2.6 53,-0.6 -2,-0.3 2,-0.4 -0.962 17.8-124.0-155.4 166.7 4.3 -2.1 -1.8 7 7 A S E +AB 58 89A 26 82,-1.2 82,-1.4 -2,-0.3 2,-0.4 -0.982 22.6 178.1-124.0 128.6 0.7 -2.8 -2.9 8 8 A I E -A 57 0A 4 49,-1.7 49,-1.1 -2,-0.4 2,-0.5 -0.968 13.0-156.3-133.6 116.2 -0.8 -6.3 -3.1 9 9 A L E -A 56 0A 31 -2,-0.4 77,-1.9 47,-0.2 78,-0.9 -0.790 12.8-165.4 -94.4 130.6 -4.4 -6.8 -4.1 10 10 A L E -AC 55 85A 1 45,-2.5 45,-1.8 -2,-0.5 2,-0.4 -0.790 6.2-161.0-113.9 157.4 -6.0 -10.0 -3.0 11 11 A D E +AC 54 84A 27 73,-1.3 73,-2.2 -2,-0.3 2,-0.3 -0.972 10.7 176.5-143.0 123.4 -9.3 -11.7 -4.1 12 12 A V E -AC 53 83A 3 41,-1.1 41,-3.3 -2,-0.4 71,-0.2 -0.943 21.4-136.6-127.8 148.7 -11.2 -14.3 -2.3 13 13 A K E - C 0 82A 70 69,-0.9 68,-4.4 -2,-0.3 69,-0.9 -0.906 21.6-126.8-108.7 131.4 -14.6 -16.0 -3.1 14 14 A P E - C 0 80A 3 0, 0.0 66,-0.2 0, 0.0 3,-0.1 -0.433 18.9-121.4 -75.0 148.2 -17.2 -16.5 -0.3 15 15 A W S S- 0 0 115 64,-2.2 2,-0.3 1,-0.2 65,-0.1 0.848 85.5 -45.6 -54.9 -34.8 -18.6 -20.0 0.2 16 16 A D S > S- 0 0 77 63,-0.3 3,-1.7 33,-0.1 -1,-0.2 -0.963 72.6 -67.1-179.6 179.3 -21.9 -18.3 -0.5 17 17 A D T 3 S+ 0 0 108 1,-0.3 4,-0.3 -2,-0.3 32,-0.1 0.770 124.2 70.2 -56.4 -25.8 -24.1 -15.4 0.2 18 18 A E T 3 S+ 0 0 129 2,-0.1 2,-0.5 3,-0.0 -1,-0.3 0.866 71.2 102.2 -59.4 -38.2 -24.3 -16.8 3.7 19 19 A T S < S- 0 0 2 -3,-1.7 2,-0.5 1,-0.1 60,-0.1 -0.308 86.7-122.3 -52.7 102.5 -20.7 -15.9 4.2 20 20 A D > - 0 0 95 -2,-0.5 4,-2.8 1,-0.2 3,-0.4 -0.323 26.8-168.3 -53.2 102.2 -21.0 -12.7 6.3 21 21 A M H > S+ 0 0 46 -2,-0.5 4,-4.3 -4,-0.3 5,-0.3 0.836 85.1 61.3 -63.5 -34.4 -19.2 -10.3 4.1 22 22 A A H > S+ 0 0 70 2,-0.2 4,-1.3 1,-0.2 -1,-0.2 0.864 111.7 38.9 -59.9 -37.3 -19.3 -7.7 6.9 23 23 A K H > S+ 0 0 117 -3,-0.4 4,-4.3 2,-0.2 5,-0.4 0.902 117.8 48.1 -78.5 -44.9 -17.2 -10.2 8.9 24 24 A L H X S+ 0 0 9 -4,-2.8 4,-1.9 1,-0.2 -2,-0.2 0.915 116.7 43.7 -61.0 -44.8 -15.1 -11.3 6.0 25 25 A E H X S+ 0 0 26 -4,-4.3 4,-0.9 2,-0.2 -1,-0.2 0.838 121.4 41.8 -68.7 -34.4 -14.5 -7.7 5.1 26 26 A E H >X S+ 0 0 114 -4,-1.3 4,-3.5 -5,-0.3 3,-1.1 0.975 111.6 50.9 -75.5 -61.2 -13.9 -6.9 8.7 27 27 A C H 3X S+ 0 0 33 -4,-4.3 4,-2.8 1,-0.3 -3,-0.2 0.903 107.4 56.6 -41.0 -53.8 -11.8 -9.8 9.8 28 28 A V H 3< S+ 0 0 5 -4,-1.9 -1,-0.3 -5,-0.4 -2,-0.2 0.885 115.0 38.4 -45.6 -45.9 -9.6 -9.1 6.8 29 29 A R H << S+ 0 0 148 -3,-1.1 -2,-0.2 -4,-0.9 -1,-0.2 0.955 107.6 62.0 -70.9 -53.2 -9.1 -5.7 8.2 30 30 A S H < S+ 0 0 74 -4,-3.5 -2,-0.2 2,-0.0 -1,-0.2 0.857 81.7 103.4 -38.8 -47.3 -8.9 -6.8 11.8 31 31 A I < - 0 0 12 -4,-2.8 2,-0.3 -5,-0.2 38,-0.0 -0.094 56.7-175.1 -41.9 131.0 -5.9 -8.7 10.8 32 32 A Q + 0 0 168 5,-0.0 2,-0.3 2,-0.0 5,-0.1 -0.965 12.5 161.2-136.1 151.7 -2.8 -6.9 12.0 33 33 A A > - 0 0 39 3,-0.4 3,-1.5 -2,-0.3 2,-0.4 -0.965 47.4 -74.3-160.1 167.5 0.9 -7.3 11.7 34 34 A D T 3 S+ 0 0 158 -2,-0.3 3,-0.1 1,-0.3 -2,-0.0 -0.571 119.3 0.1 -73.6 125.7 4.2 -5.5 12.0 35 35 A G T 3 S+ 0 0 28 -2,-0.4 2,-0.6 1,-0.3 -1,-0.3 0.587 101.8 136.8 71.5 10.5 4.7 -3.1 9.1 36 36 A L < - 0 0 17 -3,-1.5 2,-0.4 23,-0.1 -3,-0.4 -0.820 35.7-167.9 -94.9 122.2 1.4 -4.3 7.8 37 37 A V E -D 58 0A 58 21,-1.2 21,-2.8 -2,-0.6 2,-0.6 -0.929 10.6-149.0-113.5 133.3 -0.9 -1.6 6.5 38 38 A W E +D 57 0A 49 -2,-0.4 19,-0.2 19,-0.2 3,-0.1 -0.900 22.3 178.1-104.2 118.1 -4.5 -2.1 5.7 39 39 A G E - 0 0 28 17,-1.4 2,-0.3 -2,-0.6 18,-0.1 0.158 41.4 -50.4 -94.1-148.0 -5.9 -0.0 2.9 40 40 A S E - 0 0 87 15,-0.1 16,-0.5 17,-0.1 2,-0.2 -0.739 51.2-140.1 -95.9 141.9 -9.3 0.2 1.3 41 41 A S E -D 55 0A 32 -2,-0.3 2,-0.3 14,-0.2 14,-0.3 -0.546 10.8-145.3 -96.7 163.9 -11.1 -2.9 0.1 42 42 A K E -D 54 0A 118 12,-1.5 12,-0.8 -2,-0.2 2,-0.3 -0.878 3.4-143.2-127.9 159.7 -13.2 -3.4 -3.1 43 43 A L E -D 53 0A 72 -2,-0.3 10,-0.1 10,-0.1 12,-0.0 -0.935 9.3-171.8-125.1 147.7 -16.3 -5.3 -3.9 44 44 A V E -D 52 0A 60 8,-0.6 8,-1.8 -2,-0.3 2,-0.2 -0.861 14.1-149.7-143.7 103.6 -17.2 -7.2 -7.1 45 45 A P E -D 51 0A 82 0, 0.0 6,-0.2 0, 0.0 4,-0.0 -0.516 9.0-168.6 -75.0 137.6 -20.7 -8.6 -7.5 46 46 A V S S- 0 0 100 4,-0.8 5,-0.1 -2,-0.2 3,-0.1 0.589 81.8 -38.0 -98.0 -16.5 -21.0 -11.7 -9.7 47 47 A G S S- 0 0 60 3,-0.7 4,-0.1 0, 0.0 3,-0.1 0.288 97.1 -72.5 155.5 55.0 -24.8 -11.4 -9.8 48 48 A Y S S+ 0 0 206 2,-0.2 2,-3.1 1,-0.2 -2,-0.1 0.304 114.1 50.8 57.5 164.8 -26.3 -10.3 -6.5 49 49 A G S S+ 0 0 46 -32,-0.1 2,-0.3 -3,-0.1 -1,-0.2 -0.311 111.8 51.9 72.7 -59.3 -26.5 -12.5 -3.4 50 50 A I + 0 0 49 -2,-3.1 -4,-0.8 -3,-0.1 -3,-0.7 -0.720 67.5 179.4-107.4 158.6 -22.8 -13.3 -3.7 51 51 A K E - D 0 45A 81 -2,-0.3 2,-0.2 -6,-0.2 -35,-0.1 -0.958 31.8 -94.9-151.9 164.7 -19.9 -10.9 -4.1 52 52 A K E - D 0 44A 64 -8,-1.8 2,-0.9 -2,-0.3 -8,-0.6 -0.599 24.3-137.7 -85.9 146.1 -16.1 -10.9 -4.4 53 53 A L E +AD 12 43A 1 -41,-3.3 -41,-1.1 -2,-0.2 2,-0.4 -0.575 41.1 161.9-102.5 66.9 -13.9 -10.5 -1.3 54 54 A Q E +AD 11 42A 22 -2,-0.9 -12,-1.5 -12,-0.8 2,-0.3 -0.712 6.9 166.5 -90.9 137.8 -11.4 -8.2 -2.8 55 55 A I E -AD 10 41A 4 -45,-1.8 -45,-2.5 -2,-0.4 2,-0.4 -0.985 25.1-136.9-148.7 153.2 -9.1 -6.1 -0.5 56 56 A Q E -A 9 0A 40 -16,-0.5 -17,-1.4 -2,-0.3 2,-0.3 -0.896 19.8-178.9-115.8 144.3 -6.0 -4.0 -0.8 57 57 A C E -AD 8 38A 0 -49,-1.1 -49,-1.7 -2,-0.4 2,-0.5 -0.919 22.2-139.2-137.0 161.2 -3.0 -4.0 1.6 58 58 A V E -AD 7 37A 17 -21,-2.8 -21,-1.2 -2,-0.3 -51,-0.2 -0.865 25.6-176.1-127.7 95.9 0.2 -2.1 1.8 59 59 A V E -A 6 0A 1 -53,-0.6 -53,-2.6 -2,-0.5 2,-1.5 -0.341 39.8 -98.2 -84.8 169.5 3.2 -4.3 2.8 60 60 A E > - 0 0 48 -55,-0.3 2,-2.6 -25,-0.1 3,-1.8 -0.633 67.6 -82.5 -91.3 78.3 6.7 -3.1 3.4 61 61 A D T 3 S- 0 0 89 -2,-1.5 -2,-0.1 1,-0.3 -56,-0.1 -0.375 113.5 -15.3 62.8 -79.6 8.2 -4.0 0.1 62 62 A D T 3 S+ 0 0 137 -2,-2.6 -1,-0.3 -58,-0.2 3,-0.2 -0.007 118.0 94.8-142.1 26.7 8.8 -7.6 1.1 63 63 A K S < S+ 0 0 133 -3,-1.8 2,-0.7 1,-0.3 -2,-0.1 0.938 85.6 41.9 -83.9 -56.8 8.3 -7.4 4.9 64 64 A V S S- 0 0 13 -29,-0.3 -1,-0.3 -31,-0.1 2,-0.2 -0.855 79.2-167.0 -98.5 112.2 4.7 -8.3 5.1 65 65 A G > - 0 0 22 -2,-0.7 4,-1.1 -3,-0.2 3,-0.4 -0.560 30.7-124.8 -95.9 161.7 3.8 -11.2 2.8 66 66 A T H > S+ 0 0 13 1,-0.2 4,-4.7 -2,-0.2 5,-0.3 0.705 99.1 83.9 -75.4 -21.2 0.4 -12.4 1.8 67 67 A D H > S+ 0 0 105 1,-0.2 4,-2.8 2,-0.2 -1,-0.2 0.916 99.0 36.7 -45.1 -53.7 1.3 -15.9 3.1 68 68 A M H > S+ 0 0 65 -3,-0.4 4,-1.3 2,-0.2 -1,-0.2 0.963 116.7 50.8 -65.0 -54.9 0.4 -14.8 6.6 69 69 A L H X S+ 0 0 0 -4,-1.1 4,-4.5 1,-0.2 3,-0.4 0.890 114.0 47.6 -49.5 -44.4 -2.6 -12.7 5.5 70 70 A E H X S+ 0 0 68 -4,-4.7 4,-2.9 2,-0.3 5,-0.5 0.958 108.9 50.8 -62.1 -53.9 -3.8 -15.7 3.5 71 71 A E H < S+ 0 0 138 -4,-2.8 -1,-0.3 -5,-0.3 -2,-0.2 0.642 120.2 40.9 -59.1 -13.6 -3.3 -18.1 6.3 72 72 A Q H < S+ 0 0 81 -4,-1.3 -2,-0.3 -3,-0.4 -1,-0.2 0.826 123.4 34.2 -99.6 -47.4 -5.3 -15.6 8.3 73 73 A I H >< S+ 0 0 6 -4,-4.5 3,-1.2 1,-0.2 -3,-0.2 0.956 127.3 39.0 -73.0 -53.6 -7.9 -14.6 5.8 74 74 A T T 3< S+ 0 0 31 -4,-2.9 -1,-0.2 -5,-0.3 -3,-0.2 0.459 91.1 95.5 -75.3 -0.6 -8.2 -18.0 4.2 75 75 A A T 3 S+ 0 0 65 -5,-0.5 2,-0.9 -6,-0.3 -1,-0.3 0.659 71.3 76.4 -63.2 -14.9 -7.8 -19.4 7.7 76 76 A F X> + 0 0 97 -3,-1.2 4,-3.2 1,-0.2 3,-1.3 -0.796 53.3 171.2-102.9 91.6 -11.6 -19.5 7.6 77 77 A E T 34 S+ 0 0 141 -2,-0.9 -1,-0.2 1,-0.3 -2,-0.1 0.511 77.7 68.2 -74.7 -4.8 -12.6 -22.5 5.5 78 78 A D T 34 S+ 0 0 107 -3,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.124 119.1 16.6 -99.0 17.7 -16.2 -21.8 6.7 79 79 A Y T <4 S+ 0 0 68 -3,-1.3 -64,-2.2 1,-0.3 2,-0.5 0.372 109.4 76.5-151.2 -45.5 -16.2 -18.6 4.7 80 80 A V E < -C 14 0A 7 -4,-3.2 -1,-0.3 -66,-0.2 3,-0.1 -0.711 49.1-175.9 -84.3 123.2 -13.4 -18.5 2.1 81 81 A Q E S- 0 0 81 -68,-4.4 2,-0.2 -2,-0.5 -1,-0.2 0.854 73.3 -24.7 -84.1 -39.8 -14.2 -20.7 -0.9 82 82 A S E -C 13 0A 68 -69,-0.9 -69,-0.9 2,-0.0 -1,-0.2 -0.616 62.5-143.7-178.7 113.0 -10.9 -20.2 -2.6 83 83 A M E +C 12 0A 36 -71,-0.2 2,-0.2 -2,-0.2 -71,-0.2 -0.495 25.7 168.6 -82.6 152.2 -8.4 -17.4 -2.3 84 84 A D E -C 11 0A 101 -73,-2.2 -73,-1.3 -2,-0.2 2,-0.4 -0.807 33.0 -95.4-147.0-174.6 -6.3 -16.2 -5.2 85 85 A V E -C 10 0A 90 -2,-0.2 -75,-0.2 -75,-0.2 3,-0.1 -0.926 16.8-172.6-116.6 139.4 -4.0 -13.3 -6.3 86 86 A A S S- 0 0 47 -77,-1.9 2,-0.3 1,-0.4 -76,-0.2 0.679 70.8 -45.1 -98.0 -25.4 -5.1 -10.2 -8.2 87 87 A A - 0 0 57 -78,-0.9 -1,-0.4 2,-0.0 2,-0.2 -0.941 43.7-131.2 171.9 173.6 -1.5 -9.0 -8.7 88 88 A F + 0 0 126 -2,-0.3 2,-0.3 -80,-0.1 -80,-0.2 -0.725 50.1 109.8-154.1 97.2 1.9 -8.5 -7.1 89 89 A N B -B 7 0A 126 -82,-1.4 -82,-1.2 -2,-0.2 -28,-0.1 -0.879 64.1 -69.0-153.2-178.4 3.7 -5.2 -7.4 90 90 A K 0 0 121 -84,-0.3 -84,-0.3 -2,-0.3 -1,-0.1 -0.198 360.0 360.0 -75.1 170.3 4.8 -2.1 -5.5 91 91 A I 0 0 86 -86,-0.4 -85,-0.2 -32,-0.1 -1,-0.1 0.650 360.0 360.0-105.8 360.0 2.4 0.6 -4.3