==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 01-OCT-05 2B6G . COMPND 2 MOLECULE: 5'- . SOURCE 2 SYNTHETIC: YES; . AUTHOR L.W.DONALDSON,P.E.JOHNSON . 81 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5660.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 64.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 9.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 40 49.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 443 A N > 0 0 112 0, 0.0 4,-3.1 0, 0.0 3,-0.4 0.000 360.0 360.0 360.0 48.5 46.3 -13.6 7.9 2 444 A P H > + 0 0 62 0, 0.0 4,-2.1 0, 0.0 5,-0.3 0.790 360.0 69.7 -63.2 -29.1 43.4 -16.0 8.8 3 445 A K H 4 S+ 0 0 172 1,-0.2 4,-0.2 2,-0.2 0, 0.0 0.961 119.4 17.1 -58.0 -48.9 40.8 -13.4 8.0 4 446 A S H 4 S+ 0 0 25 -3,-0.4 -1,-0.2 2,-0.2 7,-0.2 0.817 126.5 55.6 -92.8 -34.8 41.6 -13.5 4.3 5 447 A L H < S+ 0 0 10 -4,-3.1 -2,-0.2 1,-0.2 -1,-0.1 0.904 114.4 40.5 -65.8 -38.1 43.5 -16.8 4.2 6 448 A T S < S+ 0 0 27 -4,-2.1 -1,-0.2 -5,-0.3 -2,-0.2 0.669 87.1 117.9 -83.9 -14.3 40.5 -18.7 5.8 7 449 A D > - 0 0 60 -5,-0.3 4,-2.9 -4,-0.2 5,-0.2 -0.310 62.3-145.2 -54.1 124.7 38.0 -16.7 3.7 8 450 A P H > S+ 0 0 28 0, 0.0 4,-2.8 0, 0.0 5,-0.2 0.855 98.1 55.0 -64.8 -32.7 36.2 -19.3 1.5 9 451 A K H > S+ 0 0 164 2,-0.2 4,-1.9 1,-0.2 8,-0.2 0.933 112.3 43.2 -67.0 -41.9 35.9 -16.9 -1.4 10 452 A L H 4 S+ 0 0 41 2,-0.2 7,-0.6 1,-0.2 -1,-0.2 0.945 115.4 48.2 -69.3 -43.7 39.6 -16.4 -1.4 11 453 A L H < S+ 0 0 1 -4,-2.9 24,-0.4 1,-0.2 -2,-0.2 0.907 108.3 55.3 -63.2 -38.2 40.3 -20.1 -0.9 12 454 A K H < S+ 0 0 153 -4,-2.8 2,-1.1 -5,-0.2 -1,-0.2 0.936 106.5 55.4 -61.4 -41.6 37.9 -20.9 -3.7 13 455 A N X - 0 0 71 -4,-1.9 4,-3.0 -5,-0.2 5,-0.2 -0.744 69.0-172.7 -94.5 98.1 40.0 -18.6 -6.0 14 456 A I H > S+ 0 0 11 -2,-1.1 4,-3.2 2,-0.2 5,-0.3 0.932 85.1 54.7 -55.8 -45.0 43.6 -19.9 -5.8 15 457 A P H > S+ 0 0 53 0, 0.0 4,-3.0 0, 0.0 5,-0.2 0.965 112.2 41.0 -55.4 -52.9 44.8 -16.8 -7.8 16 458 A M H > S+ 0 0 95 2,-0.2 4,-3.0 1,-0.2 5,-0.2 0.928 113.3 55.7 -62.7 -39.6 43.2 -14.3 -5.4 17 459 A W H X S+ 0 0 0 -4,-3.0 4,-1.8 -7,-0.6 -1,-0.2 0.958 110.8 44.1 -58.1 -45.7 44.4 -16.5 -2.6 18 460 A L H X>S+ 0 0 0 -4,-3.2 4,-2.6 -5,-0.2 5,-1.6 0.930 111.0 54.3 -64.9 -41.2 48.0 -16.2 -3.9 19 461 A K H <5S+ 0 0 119 -4,-3.0 -2,-0.2 -5,-0.3 -1,-0.2 0.922 104.4 55.3 -60.4 -39.2 47.5 -12.5 -4.5 20 462 A S H <5S+ 0 0 40 -4,-3.0 -1,-0.2 1,-0.2 -2,-0.2 0.953 111.2 43.5 -59.3 -44.6 46.5 -12.1 -0.9 21 463 A L H <5S- 0 0 24 -4,-1.8 -1,-0.2 -5,-0.2 -2,-0.2 0.866 110.9-127.7 -66.8 -34.4 49.8 -13.8 0.1 22 464 A R T <5S+ 0 0 178 -4,-2.6 3,-0.2 -5,-0.2 -3,-0.2 0.596 82.0 109.6 94.8 15.5 51.6 -11.7 -2.5 23 465 A L >>< + 0 0 30 -5,-1.6 3,-3.1 1,-0.2 4,-0.7 0.088 24.2 140.4-107.3 22.1 53.3 -14.7 -4.1 24 466 A H H >> + 0 0 91 -6,-0.5 4,-1.0 1,-0.3 3,-0.5 0.751 54.7 88.6 -38.6 -19.3 51.2 -14.5 -7.3 25 467 A K H 34 S+ 0 0 162 1,-0.3 3,-0.3 -3,-0.2 -1,-0.3 0.910 96.0 34.5 -49.8 -42.1 54.5 -15.4 -8.9 26 468 A Y H X>>S+ 0 0 27 -3,-3.1 4,-3.8 1,-0.2 3,-1.7 0.646 96.6 87.6 -88.1 -13.7 53.6 -19.1 -8.4 27 469 A S H <5S+ 0 0 5 -4,-3.8 3,-0.9 2,-0.1 -3,-0.2 0.897 95.0 91.3 -64.1 -38.4 49.9 -23.4 -8.7 31 473 A S T 3<< + 0 0 34 -4,-1.6 -18,-0.0 -5,-0.5 -3,-0.0 -0.107 68.2 55.7 -53.4 157.7 46.6 -22.1 -10.2 32 474 A G T 3 S+ 0 0 83 1,-0.2 -1,-0.2 0, 0.0 -2,-0.1 0.321 96.2 81.1 97.7 -8.4 44.5 -24.8 -12.0 33 475 A T S < S- 0 0 43 -3,-0.9 -1,-0.2 4,-0.0 -19,-0.0 -0.994 82.9-114.1-132.9 136.1 44.5 -27.1 -8.9 34 476 A P > - 0 0 71 0, 0.0 4,-2.9 0, 0.0 3,-0.4 -0.310 18.9-126.9 -67.4 147.7 42.2 -26.9 -5.8 35 477 A W H > S+ 0 0 7 -24,-0.4 4,-2.8 1,-0.2 5,-0.2 0.785 106.9 69.7 -66.2 -23.3 43.7 -26.1 -2.4 36 478 A I H 4 S+ 0 0 62 1,-0.2 -1,-0.2 2,-0.2 4,-0.1 0.942 114.3 25.2 -61.8 -44.2 42.0 -29.2 -1.1 37 479 A E H >4 S+ 0 0 114 -3,-0.4 3,-1.6 2,-0.1 4,-0.2 0.820 117.8 63.2 -88.1 -31.8 44.4 -31.4 -3.1 38 480 A L H >< S+ 0 0 2 -4,-2.9 3,-2.9 1,-0.3 -2,-0.2 0.940 95.4 58.9 -59.6 -42.9 47.2 -28.7 -3.2 39 481 A I T 3< S+ 0 0 15 -4,-2.8 -1,-0.3 1,-0.3 -2,-0.1 0.735 98.8 62.7 -60.5 -13.2 47.5 -28.9 0.6 40 482 A Y T < S+ 0 0 183 -3,-1.6 -1,-0.3 -5,-0.2 2,-0.3 0.476 81.0 104.9 -89.2 0.3 48.3 -32.6 0.0 41 483 A L < - 0 0 51 -3,-2.9 2,-0.1 -4,-0.2 -3,-0.0 -0.597 67.7-134.3 -81.7 140.3 51.4 -31.7 -2.0 42 484 A D > - 0 0 108 -2,-0.3 4,-2.9 1,-0.1 5,-0.2 -0.462 23.2-108.8 -88.4 165.3 54.8 -32.2 -0.2 43 485 A D H > S+ 0 0 56 1,-0.2 4,-3.0 2,-0.2 5,-0.2 0.898 121.6 53.6 -61.7 -36.3 57.7 -29.6 -0.2 44 486 A E H > S+ 0 0 156 2,-0.2 4,-3.1 1,-0.2 5,-0.2 0.944 109.7 47.4 -65.3 -42.2 59.6 -31.9 -2.6 45 487 A T H > S+ 0 0 66 2,-0.2 4,-3.1 1,-0.2 5,-0.3 0.949 112.4 49.5 -63.7 -44.0 56.7 -32.0 -5.0 46 488 A L H X S+ 0 0 10 -4,-2.9 4,-3.2 1,-0.2 -2,-0.2 0.947 112.6 47.8 -61.4 -42.6 56.4 -28.2 -4.7 47 489 A E H < S+ 0 0 89 -4,-3.0 -2,-0.2 -5,-0.2 -1,-0.2 0.946 112.8 47.9 -63.9 -44.1 60.1 -27.9 -5.4 48 490 A K H < S+ 0 0 191 -4,-3.1 -2,-0.2 -5,-0.2 -1,-0.2 0.934 114.4 47.2 -62.6 -41.5 59.9 -30.4 -8.4 49 491 A K H < S- 0 0 90 -4,-3.1 2,-0.3 -5,-0.2 -2,-0.2 0.941 125.8 -96.3 -65.4 -44.9 56.9 -28.4 -9.7 50 492 A G S < S+ 0 0 18 -4,-3.2 -1,-0.2 -5,-0.3 -24,-0.1 -0.890 85.2 113.7 165.8-132.4 58.7 -25.1 -9.2 51 493 A V + 0 0 20 -2,-0.3 -1,-0.2 1,-0.1 6,-0.1 0.866 38.8 173.3 31.0 60.6 58.7 -22.3 -6.5 52 494 A L + 0 0 114 -3,-0.1 5,-0.2 -5,-0.1 -1,-0.1 0.921 39.2 113.1 -63.4 -40.1 62.4 -23.2 -5.8 53 495 A A > - 0 0 50 1,-0.2 4,-2.8 3,-0.1 5,-0.2 -0.013 59.0-155.8 -34.7 110.4 62.7 -20.2 -3.4 54 496 A L H > S+ 0 0 76 2,-0.2 4,-3.0 1,-0.2 5,-0.2 0.950 93.9 54.4 -61.8 -44.2 63.1 -22.0 -0.1 55 497 A G H > S+ 0 0 46 1,-0.2 4,-3.3 2,-0.2 5,-0.3 0.966 109.1 47.5 -54.5 -50.5 61.7 -19.0 1.7 56 498 A A H > S+ 0 0 11 1,-0.2 4,-3.1 2,-0.2 5,-0.4 0.932 111.9 50.8 -57.8 -41.8 58.6 -19.1 -0.5 57 499 A R H X S+ 0 0 36 -4,-2.8 4,-2.4 2,-0.2 -1,-0.2 0.899 112.3 47.4 -63.0 -37.4 58.4 -22.8 0.2 58 500 A R H X S+ 0 0 159 -4,-3.0 4,-3.0 2,-0.2 5,-0.2 0.965 115.6 42.5 -69.4 -49.8 58.7 -22.1 3.9 59 501 A K H X S+ 0 0 116 -4,-3.3 4,-3.2 -5,-0.2 5,-0.2 0.963 118.5 46.0 -62.1 -47.1 56.1 -19.3 3.9 60 502 A L H X S+ 0 0 2 -4,-3.1 4,-3.3 -5,-0.3 5,-0.3 0.926 111.5 52.9 -62.5 -40.3 53.8 -21.4 1.7 61 503 A L H X S+ 0 0 82 -4,-2.4 4,-2.8 -5,-0.4 -2,-0.2 0.961 112.2 44.4 -61.2 -46.6 54.4 -24.4 3.9 62 504 A K H X S+ 0 0 158 -4,-3.0 4,-3.1 2,-0.2 5,-0.3 0.961 114.7 48.8 -62.6 -47.6 53.4 -22.5 7.0 63 505 A A H X S+ 0 0 13 -4,-3.2 4,-3.1 -5,-0.2 5,-0.2 0.965 114.1 45.7 -57.2 -49.2 50.4 -21.0 5.2 64 506 A F H X S+ 0 0 11 -4,-3.3 4,-3.3 -5,-0.2 5,-0.3 0.907 110.3 55.1 -62.3 -36.9 49.4 -24.4 3.9 65 507 A G H X S+ 0 0 26 -4,-2.8 4,-2.7 -5,-0.3 -2,-0.2 0.962 110.9 44.1 -61.8 -45.9 50.0 -25.8 7.5 66 508 A I H X S+ 0 0 68 -4,-3.1 4,-3.1 2,-0.2 5,-0.3 0.939 114.1 50.4 -63.9 -42.7 47.6 -23.2 8.9 67 509 A V H X S+ 0 0 4 -4,-3.1 4,-3.1 -5,-0.3 -2,-0.2 0.945 111.5 48.0 -61.1 -43.7 45.1 -23.9 6.0 68 510 A I H X S+ 0 0 50 -4,-3.3 4,-3.2 -5,-0.2 5,-0.2 0.929 110.9 51.6 -62.9 -41.7 45.3 -27.6 6.8 69 511 A D H X S+ 0 0 87 -4,-2.7 4,-3.1 -5,-0.3 5,-0.2 0.963 112.3 45.1 -61.4 -46.9 44.8 -26.9 10.5 70 512 A Y H X>S+ 0 0 48 -4,-3.1 4,-2.7 2,-0.2 5,-1.1 0.936 112.5 52.3 -62.2 -41.6 41.7 -24.8 9.7 71 513 A K H <5S+ 0 0 58 -4,-3.1 -2,-0.2 -5,-0.3 -1,-0.2 0.942 111.4 46.3 -61.0 -43.1 40.6 -27.6 7.3 72 514 A E H <5S+ 0 0 142 -4,-3.2 -2,-0.2 1,-0.2 -1,-0.2 0.950 111.8 50.5 -65.0 -44.1 41.0 -30.2 10.1 73 515 A R H <5S- 0 0 154 -4,-3.1 -1,-0.2 -5,-0.2 -2,-0.2 0.893 100.3-143.8 -60.2 -35.9 39.2 -27.9 12.5 74 516 A D T <5 + 0 0 100 -4,-2.7 -3,-0.2 -5,-0.2 -1,-0.1 0.753 57.7 134.2 77.8 23.7 36.4 -27.6 9.9 75 517 A L < + 0 0 118 -5,-1.1 2,-0.3 2,-0.1 -4,-0.1 0.524 40.7 105.1 -82.3 -2.0 35.8 -23.9 10.8 76 518 A I S S- 0 0 4 -6,-0.5 -69,-0.1 -5,-0.1 -70,-0.0 -0.610 84.6-107.8 -79.9 134.3 35.8 -23.1 7.1 77 519 A D > - 0 0 83 -2,-0.3 3,-3.0 1,-0.2 4,-0.3 -0.331 22.9-122.5 -60.2 137.7 32.3 -22.4 5.7 78 520 A R G > S+ 0 0 173 1,-0.3 3,-2.0 2,-0.2 -1,-0.2 0.785 105.6 85.4 -54.3 -21.0 31.1 -25.3 3.5 79 521 A S G 3 S+ 0 0 86 1,-0.3 -1,-0.3 2,-0.2 -2,-0.1 0.818 77.1 68.2 -52.0 -25.4 30.7 -22.6 0.9 80 522 A A G < 0 0 12 -3,-3.0 -1,-0.3 -68,-0.0 -2,-0.2 0.895 360.0 360.0 -63.6 -35.5 34.5 -23.4 0.3 81 523 A Y < 0 0 129 -3,-2.0 -2,-0.2 -4,-0.3 -3,-0.1 0.562 360.0 360.0-135.0 360.0 33.5 -26.8 -1.1