==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIFREEZE PROTEIN 24-JAN-99 1B7J . COMPND 2 MOLECULE: PROTEIN (ANTIFREEZE PROTEIN TYPE III); . SOURCE 2 ORGANISM_SCIENTIFIC: MACROZOARCES AMERICANUS; . AUTHOR S.P.GRAETHER,C.I.DELUCA,J.BAARDSNES,G.A.HILL,P.L.DAVIES, . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3677.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 59.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 22.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 13 19.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 5 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A A 0 0 130 0, 0.0 27,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 170.2 17.0 25.1 30.7 2 1 A N + 0 0 99 25,-0.1 2,-0.3 2,-0.0 0, 0.0 0.365 360.0 98.2 -50.6 -33.9 18.7 26.3 27.4 3 2 A Q - 0 0 96 24,-0.1 25,-0.4 1,-0.1 2,-0.3 -0.364 53.1-160.7 -71.6 119.3 21.0 23.6 25.7 4 3 A A - 0 0 17 -2,-0.3 31,-2.3 23,-0.2 32,-0.3 -0.717 4.3-159.2 -93.0 146.8 19.1 21.8 22.9 5 4 A S E -AB 26 34A 0 21,-2.9 21,-2.3 -2,-0.3 2,-0.5 -0.722 30.5 -90.3-119.4 165.5 20.2 18.5 21.5 6 5 A V E -A 25 0A 0 27,-2.2 50,-2.6 50,-0.3 2,-0.4 -0.692 46.6-174.2 -75.6 125.1 19.7 16.6 18.2 7 6 A V E -AC 24 55A 0 17,-2.4 17,-2.8 -2,-0.5 2,-0.3 -0.948 32.0-102.7-123.7 141.3 16.5 14.4 18.5 8 7 A A E -A 23 0A 1 46,-2.9 45,-2.4 -2,-0.4 15,-0.2 -0.479 24.4-165.4 -68.2 124.8 15.3 11.9 15.9 9 8 A N S S+ 0 0 76 13,-3.1 2,-0.3 -2,-0.3 14,-0.2 0.542 77.3 7.8 -87.9 -5.2 12.4 13.3 13.9 10 9 A Q S S- 0 0 82 12,-0.6 2,-0.3 41,-0.1 43,-0.1 -0.946 102.6 -71.1-157.4 167.0 11.5 9.9 12.5 11 10 A L - 0 0 93 -2,-0.3 38,-0.0 41,-0.1 -2,-0.0 -0.561 46.6-154.4 -63.6 129.4 12.7 6.3 13.1 12 11 A I B -D 50 0B 0 38,-2.7 38,-2.7 -2,-0.3 3,-0.1 -0.945 14.5-135.5-108.3 107.3 16.2 6.1 11.7 13 12 A P > - 0 0 60 0, 0.0 3,-1.9 0, 0.0 33,-0.3 -0.245 37.1 -78.7 -55.4 152.1 17.0 2.4 10.7 14 13 A I T 3 S+ 0 0 98 1,-0.3 33,-0.2 33,-0.1 35,-0.1 -0.215 116.8 12.9 -54.8 136.3 20.4 0.9 11.6 15 14 A N T 3 S+ 0 0 82 31,-1.4 2,-0.3 1,-0.2 -1,-0.3 0.548 88.7 146.7 67.8 15.6 23.1 2.0 9.3 16 15 A T < - 0 0 37 -3,-1.9 30,-1.8 32,-0.2 2,-0.5 -0.602 52.0-122.7 -77.0 137.3 21.1 4.8 7.6 17 16 A A B -E 45 0C 47 -2,-0.3 28,-0.3 28,-0.2 25,-0.1 -0.684 38.3-113.9 -73.2 125.0 23.1 7.9 6.5 18 17 A L - 0 0 2 26,-3.1 25,-2.7 -2,-0.5 2,-0.3 -0.331 32.2-167.7 -66.5 140.9 21.4 10.9 8.3 19 18 A T > - 0 0 61 23,-0.2 3,-1.5 24,-0.1 4,-0.4 -0.876 36.4-106.9-119.7 168.1 19.5 13.5 6.3 20 19 A L G > S+ 0 0 112 -2,-0.3 3,-1.3 1,-0.3 -1,-0.1 0.824 116.7 63.4 -64.7 -29.3 18.3 16.9 7.5 21 20 A A G 3 S+ 0 0 66 1,-0.3 -1,-0.3 -12,-0.0 -3,-0.0 0.755 98.3 58.4 -68.6 -18.0 14.7 15.7 7.5 22 21 A M G < S+ 0 0 16 -3,-1.5 -13,-3.1 -13,-0.1 -12,-0.6 0.595 96.0 71.5 -87.7 -8.1 15.7 13.2 10.2 23 22 A M E < +A 8 0A 15 -3,-1.3 2,-0.2 -4,-0.4 -15,-0.2 -0.927 51.3 172.8-121.1 118.3 17.0 15.7 12.8 24 23 A R E -A 7 0A 88 -17,-2.8 -17,-2.4 -2,-0.5 2,-0.5 -0.662 30.1-121.8-108.7 169.9 15.1 18.2 15.0 25 24 A S E +A 6 0A 69 -2,-0.2 2,-0.3 -19,-0.2 -19,-0.2 -0.967 39.9 158.6-112.8 130.0 16.4 20.3 17.8 26 25 A E E -A 5 0A 76 -21,-2.3 -21,-2.9 -2,-0.5 2,-0.9 -0.996 45.6-114.6-153.6 144.8 14.9 20.0 21.3 27 26 A V + 0 0 81 -2,-0.3 2,-0.3 -23,-0.3 -23,-0.2 -0.784 57.2 151.3 -84.8 109.4 15.8 20.7 24.9 28 27 A V - 0 0 29 -2,-0.9 4,-0.1 -25,-0.4 -2,-0.0 -0.876 38.8 -96.0-134.3 164.7 16.0 17.2 26.4 29 28 A T S S+ 0 0 133 -2,-0.3 2,-0.2 2,-0.1 26,-0.1 -0.996 100.0 39.4-134.7 140.6 17.8 15.4 29.3 30 29 A P S S- 0 0 97 0, 0.0 2,-0.3 0, 0.0 -2,-0.0 0.587 99.2-121.0 -64.6 161.9 20.2 13.8 29.2 31 30 A V - 0 0 79 -2,-0.2 -2,-0.1 1,-0.1 -27,-0.1 -0.532 35.2-178.7 -77.4 134.9 21.9 16.1 26.8 32 31 A G - 0 0 9 1,-0.3 25,-0.2 -2,-0.3 -1,-0.1 -0.024 51.5 -21.1-108.7-148.2 23.0 14.5 23.5 33 32 A I S S- 0 0 0 23,-3.1 -27,-2.2 -27,-0.3 -1,-0.3 -0.436 84.0-100.7 -59.3 134.0 24.9 15.9 20.4 34 33 A P B > -B 5 0A 34 0, 0.0 3,-2.1 0, 0.0 -29,-0.3 -0.346 21.3-126.3 -62.2 139.6 24.4 19.7 20.4 35 34 A A G > S+ 0 0 17 -31,-2.3 3,-2.2 1,-0.3 -30,-0.1 0.840 106.4 72.0 -55.9 -29.9 21.8 21.0 18.0 36 35 A E G 3 S+ 0 0 141 -32,-0.3 -1,-0.3 1,-0.3 4,-0.2 0.757 91.6 60.5 -57.2 -22.7 24.5 23.3 16.5 37 36 A D G X> + 0 0 16 -3,-2.1 4,-1.0 1,-0.2 3,-0.7 0.496 67.2 105.0 -86.9 -1.5 26.1 20.2 15.0 38 37 A I H X> S+ 0 0 24 -3,-2.2 3,-1.4 1,-0.2 4,-0.8 0.891 81.0 53.2 -49.5 -46.3 23.1 19.1 12.8 39 38 A P H >4 S+ 0 0 95 0, 0.0 3,-0.8 0, 0.0 -1,-0.2 0.890 106.9 52.7 -51.9 -40.0 24.9 20.4 9.6 40 39 A R H <4 S+ 0 0 122 -3,-0.7 -2,-0.2 -4,-0.2 -3,-0.1 0.712 104.3 57.9 -70.1 -21.1 28.0 18.4 10.5 41 40 A L H X< S+ 0 0 0 -3,-1.4 3,-2.2 -4,-1.0 -23,-0.4 0.669 73.1 118.6 -87.7 -16.3 26.0 15.1 10.9 42 41 A V T << S+ 0 0 54 -4,-0.8 -23,-0.2 -3,-0.8 3,-0.1 -0.252 84.6 9.7 -62.2 135.4 24.4 14.9 7.4 43 42 A S T 3 S+ 0 0 91 -25,-2.7 2,-0.3 1,-0.3 -1,-0.3 0.417 97.2 120.3 71.5 11.9 25.4 11.8 5.5 44 43 A M < - 0 0 48 -3,-2.2 -26,-3.1 -26,-0.1 2,-0.3 -0.700 62.2-120.8 -93.4 151.0 27.1 10.2 8.5 45 44 A Q B -E 17 0C 79 17,-0.4 17,-3.0 -2,-0.3 2,-0.3 -0.725 8.7-131.8 -97.3 146.5 25.6 6.8 9.5 46 45 A V B -F 61 0D 0 -30,-1.8 -31,-1.4 -2,-0.3 15,-0.2 -0.650 9.7-146.8 -89.2 148.7 24.1 5.7 12.8 47 46 A N S S+ 0 0 58 13,-2.4 2,-0.3 -2,-0.3 14,-0.1 0.314 79.5 28.8-101.3 11.7 25.3 2.4 14.2 48 47 A R S S- 0 0 96 12,-0.4 2,-0.2 -35,-0.1 -32,-0.2 -0.958 97.6 -81.7-157.5 161.7 22.0 1.3 15.7 49 48 A A - 0 0 55 -2,-0.3 -2,-0.1 -35,-0.1 -38,-0.0 -0.515 40.2-155.7 -66.8 136.5 18.2 1.9 15.1 50 49 A V B -D 12 0B 1 -38,-2.7 -38,-2.7 -2,-0.2 -40,-0.1 -0.941 11.9-141.6-120.2 102.3 17.2 5.3 16.6 51 50 A P > - 0 0 69 0, 0.0 3,-2.1 0, 0.0 -43,-0.3 -0.250 36.6 -79.4 -51.1 148.9 13.4 5.4 17.4 52 51 A L T 3 S+ 0 0 108 1,-0.3 -43,-0.2 -43,-0.1 -41,-0.1 -0.307 120.3 20.9 -50.4 131.2 11.4 8.6 16.8 53 52 A G T 3 S+ 0 0 36 -45,-2.4 -1,-0.3 1,-0.3 2,-0.2 0.387 90.5 135.8 85.9 -0.0 11.9 11.0 19.6 54 53 A T < - 0 0 44 -3,-2.1 -46,-2.9 1,-0.1 2,-0.4 -0.569 58.0-118.9 -80.7 138.2 15.3 9.5 20.7 55 54 A T B -C 7 0A 21 -48,-0.2 2,-0.5 -2,-0.2 -48,-0.3 -0.627 26.7-124.1 -74.0 128.3 18.2 11.9 21.5 56 55 A L - 0 0 0 -50,-2.6 -23,-3.1 -2,-0.4 -50,-0.3 -0.660 30.4-163.7 -75.0 120.5 21.2 11.3 19.2 57 56 A M >> - 0 0 40 -2,-0.5 3,-2.1 -25,-0.2 4,-0.5 -0.764 30.6-108.7-102.4 156.0 24.3 10.6 21.3 58 57 A P G >4 S+ 0 0 61 0, 0.0 3,-1.2 0, 0.0 6,-0.3 0.864 116.5 54.9 -48.9 -44.8 28.0 10.7 20.2 59 58 A D G 34 S+ 0 0 100 1,-0.2 -12,-0.1 3,-0.1 -3,-0.0 0.593 98.1 64.7 -70.9 -7.4 28.4 6.9 20.3 60 59 A M G <4 S+ 0 0 22 -3,-2.1 -13,-2.4 -14,-0.1 2,-0.6 0.605 90.7 74.0 -90.1 -13.6 25.4 6.3 18.0 61 60 A V B X< S-F 46 0D 6 -3,-1.2 3,-1.5 -4,-0.5 2,-0.3 -0.887 81.7-129.9-109.5 122.4 27.0 8.0 15.0 62 61 A K T 3 S+ 0 0 87 -17,-3.0 -17,-0.4 -2,-0.6 3,-0.1 -0.465 93.6 9.0 -65.2 125.8 29.8 6.3 13.1 63 62 A G T 3 S+ 0 0 76 1,-0.3 2,-0.3 -2,-0.3 -1,-0.3 0.448 92.1 143.3 85.4 -3.4 32.8 8.6 12.6 64 63 A Y < + 0 0 33 -3,-1.5 2,-0.3 -6,-0.3 -1,-0.3 -0.570 10.2 151.4 -76.1 131.9 31.5 11.3 15.0 65 64 A A 0 0 70 -2,-0.3 -3,-0.0 -3,-0.1 -6,-0.0 -0.923 360.0 360.0-154.0 124.6 34.0 13.1 17.1 66 65 A A 0 0 122 -2,-0.3 -2,-0.1 0, 0.0 -29,-0.0 -0.290 360.0 360.0-110.8 360.0 33.4 16.7 18.2