==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN 04-OCT-05 2B7E . COMPND 2 MOLECULE: PRE-MRNA PROCESSING PROTEIN PRP40; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR A.GASCH,S.WIESNER,P.MARTIN-MALPARTIDA,X.RAMIREZ-ESPAIN, . 59 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4011.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 44 74.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 31 52.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G > 0 0 103 0, 0.0 2,-1.4 0, 0.0 4,-0.5 0.000 360.0 360.0 360.0 168.5 -12.0 -6.5 6.9 2 2 A A T 4 + 0 0 46 1,-0.1 39,-0.0 3,-0.1 0, 0.0 -0.412 360.0 88.7 -91.1 59.5 -9.7 -3.4 6.6 3 3 A M T > S+ 0 0 129 -2,-1.4 4,-2.5 3,-0.1 5,-0.2 0.644 94.2 17.8-113.1 -81.2 -8.3 -3.6 10.1 4 4 A E H > S+ 0 0 129 1,-0.2 4,-2.2 2,-0.2 5,-0.2 0.922 130.1 49.5 -61.3 -46.5 -5.2 -5.7 10.5 5 5 A A H X S+ 0 0 25 -4,-0.5 4,-2.3 1,-0.2 -1,-0.2 0.910 112.3 46.7 -59.3 -47.4 -4.5 -5.7 6.8 6 6 A E H > S+ 0 0 65 2,-0.2 4,-2.5 -5,-0.2 5,-0.2 0.924 109.3 54.5 -63.3 -47.2 -4.9 -1.9 6.5 7 7 A K H X S+ 0 0 147 -4,-2.5 4,-1.7 1,-0.2 -2,-0.2 0.940 114.6 39.2 -52.3 -54.2 -2.7 -1.2 9.5 8 8 A E H X S+ 0 0 86 -4,-2.2 4,-3.0 1,-0.2 5,-0.3 0.868 111.4 60.0 -64.7 -36.5 0.2 -3.2 8.2 9 9 A F H X S+ 0 0 1 -4,-2.3 4,-1.2 -5,-0.2 -2,-0.2 0.875 105.7 47.6 -61.4 -37.8 -0.5 -1.9 4.7 10 10 A I H X S+ 0 0 28 -4,-2.5 4,-1.5 2,-0.2 -1,-0.2 0.914 113.4 48.5 -68.7 -38.7 0.1 1.7 6.0 11 11 A T H X S+ 0 0 56 -4,-1.7 4,-2.5 1,-0.2 -2,-0.2 0.909 110.6 48.7 -69.5 -41.7 3.3 0.6 7.7 12 12 A M H X S+ 0 0 1 -4,-3.0 4,-2.1 1,-0.2 -1,-0.2 0.791 106.0 60.0 -69.1 -26.8 4.7 -1.2 4.7 13 13 A L H <>S+ 0 0 0 -4,-1.2 5,-2.6 -5,-0.3 -1,-0.2 0.896 109.8 40.7 -69.3 -38.3 3.9 1.9 2.7 14 14 A K H ><5S+ 0 0 77 -4,-1.5 3,-1.5 3,-0.2 -2,-0.2 0.907 116.0 50.7 -70.9 -42.3 6.2 4.0 4.9 15 15 A E H 3<5S+ 0 0 120 -4,-2.5 -2,-0.2 1,-0.3 -1,-0.2 0.786 106.3 53.9 -69.3 -28.9 8.8 1.2 5.0 16 16 A N T 3<5S- 0 0 10 -4,-2.1 -1,-0.3 -5,-0.2 -2,-0.2 0.302 116.2-120.1 -85.8 8.7 8.7 0.9 1.2 17 17 A Q T < 5 + 0 0 150 -3,-1.5 -3,-0.2 1,-0.2 2,-0.2 0.792 53.2 168.6 59.6 32.5 9.4 4.6 1.2 18 18 A V < + 0 0 4 -5,-2.6 2,-0.2 -6,-0.2 -1,-0.2 -0.513 3.8 141.6 -77.4 141.7 6.2 5.3 -0.7 19 19 A D - 0 0 60 -2,-0.2 3,-0.4 40,-0.0 37,-0.1 -0.812 67.5 -54.5-154.0-159.7 4.9 8.9 -1.1 20 20 A S S S+ 0 0 68 1,-0.3 2,-1.1 -2,-0.2 36,-0.1 0.772 120.8 71.8 -60.3 -27.0 3.3 11.2 -3.6 21 21 A T S S+ 0 0 102 2,-0.0 2,-0.3 0, 0.0 -1,-0.3 -0.182 86.9 91.5 -85.3 45.9 6.0 10.5 -6.2 22 22 A W - 0 0 33 -2,-1.1 2,-0.2 -3,-0.4 -4,-0.0 -0.978 59.5-150.5-139.6 146.8 4.7 6.9 -6.8 23 23 A S > - 0 0 66 -2,-0.3 4,-1.1 1,-0.0 3,-0.4 -0.684 36.5-109.3-105.1 170.2 2.2 5.2 -9.1 24 24 A F H > S+ 0 0 33 -2,-0.2 4,-1.2 1,-0.2 -1,-0.0 0.404 118.6 66.9 -85.2 15.4 0.2 2.1 -8.2 25 25 A S H > S+ 0 0 79 2,-0.2 4,-2.5 3,-0.1 -1,-0.2 0.840 97.0 50.2 -92.8 -41.0 2.5 0.4 -10.6 26 26 A R H >>S+ 0 0 115 -3,-0.4 4,-2.9 2,-0.2 5,-0.8 0.819 108.8 54.8 -65.7 -32.9 5.4 0.9 -8.3 27 27 A I H X>S+ 0 0 0 -4,-1.1 4,-1.7 3,-0.2 5,-0.7 0.974 112.2 40.7 -63.1 -54.5 3.2 -0.6 -5.6 28 28 A I H <5S+ 0 0 85 -4,-1.2 -2,-0.2 1,-0.2 4,-0.2 0.855 123.3 41.9 -62.4 -32.7 2.5 -3.7 -7.6 29 29 A S H <5S+ 0 0 59 -4,-2.5 -2,-0.2 2,-0.1 -1,-0.2 0.868 130.0 21.3 -85.5 -37.9 6.1 -3.9 -8.7 30 30 A E H >X5S+ 0 0 65 -4,-2.9 4,-2.5 -5,-0.2 3,-0.8 0.812 126.4 46.0-101.6 -35.8 8.0 -3.0 -5.6 31 31 A L H 3X< - 0 0 31 -4,-0.6 3,-1.2 -5,-0.2 -1,-0.2 -0.953 67.4-122.3-155.9 138.9 7.6 -8.0 1.6 36 36 A P T >> S+ 0 0 88 0, 0.0 4,-1.9 0, 0.0 3,-1.5 0.275 84.8 104.4 -69.0 14.5 4.6 -10.4 1.1 37 37 A R H 3> S+ 0 0 37 1,-0.3 4,-1.7 2,-0.2 -28,-0.1 0.821 73.7 62.3 -63.4 -28.7 2.3 -8.1 3.2 38 38 A Y H <4 S+ 0 0 6 -3,-1.2 -1,-0.3 -7,-0.6 -6,-0.1 0.691 112.3 37.3 -68.0 -17.4 0.8 -7.0 -0.2 39 39 A W H <4 S+ 0 0 131 -3,-1.5 -2,-0.2 -4,-0.1 -1,-0.2 0.630 102.7 69.8-106.9 -24.4 -0.3 -10.6 -0.6 40 40 A M H < S+ 0 0 147 -4,-1.9 2,-0.6 1,-0.1 -2,-0.2 0.946 102.1 51.9 -56.1 -49.9 -1.1 -11.3 3.1 41 41 A V S < S- 0 0 17 -4,-1.7 -1,-0.1 -36,-0.1 3,-0.1 -0.829 111.6-108.0 -86.2 123.4 -4.1 -9.0 2.5 42 42 A D - 0 0 122 -2,-0.6 2,-1.1 1,-0.2 -2,-0.1 -0.135 39.6 -94.8 -58.6 144.3 -5.9 -10.2 -0.6 43 43 A D + 0 0 97 -4,-0.1 -1,-0.2 1,-0.1 3,-0.1 -0.469 49.6 164.3 -73.1 97.3 -5.4 -8.1 -3.7 44 44 A D > - 0 0 75 -2,-1.1 4,-3.3 1,-0.1 5,-0.3 -0.917 16.1-170.6-103.1 98.0 -8.3 -5.7 -4.0 45 45 A P H > S+ 0 0 67 0, 0.0 4,-1.0 0, 0.0 -1,-0.1 0.735 83.3 51.6 -66.7 -22.2 -6.8 -3.3 -6.5 46 46 A L H > S+ 0 0 94 2,-0.2 4,-2.3 3,-0.2 5,-0.1 0.878 115.1 40.5 -82.3 -37.8 -9.6 -0.8 -6.1 47 47 A W H > S+ 0 0 54 2,-0.2 4,-3.1 1,-0.2 5,-0.3 0.888 114.8 52.5 -74.7 -38.7 -9.2 -0.7 -2.3 48 48 A K H X S+ 0 0 0 -4,-3.3 4,-0.7 1,-0.2 -1,-0.2 0.856 116.3 41.2 -61.2 -32.4 -5.5 -0.8 -2.5 49 49 A K H X S+ 0 0 100 -4,-1.0 4,-1.6 -5,-0.3 -2,-0.2 0.812 114.3 50.7 -88.6 -33.1 -5.7 2.1 -4.9 50 50 A E H X S+ 0 0 126 -4,-2.3 4,-1.1 2,-0.2 -2,-0.2 0.933 114.0 44.7 -62.9 -47.9 -8.5 3.9 -2.9 51 51 A M H X S+ 0 0 9 -4,-3.1 4,-1.8 1,-0.2 -2,-0.2 0.780 108.2 59.5 -71.6 -24.1 -6.4 3.5 0.3 52 52 A F H X S+ 0 0 10 -4,-0.7 4,-1.2 -5,-0.3 -1,-0.2 0.873 100.8 54.0 -69.3 -36.4 -3.4 4.7 -1.8 53 53 A E H X S+ 0 0 122 -4,-1.6 4,-1.7 1,-0.2 -2,-0.2 0.815 109.1 49.9 -65.9 -28.2 -5.3 7.9 -2.5 54 54 A K H X>S+ 0 0 85 -4,-1.1 4,-3.2 2,-0.2 5,-2.8 0.864 107.0 53.4 -72.6 -37.2 -5.6 8.1 1.2 55 55 A Y H <5S+ 0 0 4 -4,-1.8 -2,-0.2 3,-0.3 -1,-0.2 0.695 113.8 43.4 -72.4 -18.8 -1.9 7.5 1.6 56 56 A L H <5S+ 0 0 39 -4,-1.2 -1,-0.2 3,-0.1 -2,-0.2 0.780 123.4 35.3 -92.3 -32.6 -1.2 10.4 -0.8 57 57 A S H <5S+ 0 0 103 -4,-1.7 -2,-0.2 -5,-0.2 -3,-0.2 0.916 144.8 5.1 -85.7 -49.0 -3.8 12.7 0.7 58 58 A N T <5 0 0 118 -4,-3.2 -3,-0.3 -5,-0.2 -4,-0.1 0.813 360.0 360.0-102.6 -45.2 -3.4 11.8 4.4 59 59 A R < 0 0 126 -5,-2.8 -1,-0.2 -7,-0.1 -3,-0.1 -0.548 360.0 360.0 71.9 360.0 -0.5 9.3 4.3