==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 05-OCT-05 2B7T . COMPND 2 MOLECULE: DOUBLE-STRANDED RNA-SPECIFIC EDITASE 1; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR R.STEFL,M.XU,L.SKRISOVSKA,R.B.EMESON,F.H.-T.ALLAIN . 73 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4767.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 46 63.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 20.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 23 31.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A P 0 0 101 0, 0.0 14,-0.2 0, 0.0 13,-0.2 0.000 360.0 360.0 360.0 175.8 2.1 12.0 -11.2 2 2 A G - 0 0 43 2,-0.1 6,-0.0 12,-0.1 0, 0.0 -0.949 360.0-171.9 174.0-177.1 -0.7 9.5 -11.4 3 3 A P S S+ 0 0 91 0, 0.0 4,-0.4 0, 0.0 7,-0.1 -0.955 94.7 78.9 -89.7 7.7 -3.1 7.6 -11.4 4 4 A V S S+ 0 0 133 2,-0.1 -2,-0.1 3,-0.0 0, 0.0 0.330 91.7 57.6 -66.8 6.4 -0.9 4.7 -12.9 5 5 A L S S- 0 0 77 -4,-0.1 6,-0.3 2,-0.1 5,-0.1 -0.984 125.9 -56.6-134.9 139.9 0.7 3.8 -9.5 6 6 A P S > S- 0 0 46 0, 0.0 4,-2.4 0, 0.0 5,-0.3 0.229 75.4-130.3 -33.4 99.2 -1.5 2.8 -6.4 7 7 A K H > S+ 0 0 143 -4,-0.4 4,-2.5 1,-0.2 5,-0.3 0.633 80.7 29.0 -46.7 -73.4 -3.4 6.0 -6.6 8 8 A N H > S+ 0 0 116 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.929 128.0 35.7 -58.1 -58.4 -3.8 8.1 -3.4 9 9 A A H > S+ 0 0 3 2,-0.2 4,-2.4 1,-0.2 5,-0.3 0.945 119.7 46.7 -57.2 -57.2 -0.6 7.1 -1.5 10 10 A L H X S+ 0 0 2 -4,-2.4 4,-2.8 1,-0.2 5,-0.2 0.923 114.6 46.7 -62.2 -46.8 1.7 6.8 -4.6 11 11 A M H X S+ 0 0 81 -4,-2.5 4,-2.5 -6,-0.3 5,-0.3 0.938 109.5 57.3 -55.8 -44.8 0.6 10.1 -6.1 12 12 A Q H X S+ 0 0 60 -4,-2.2 4,-2.3 -5,-0.3 -2,-0.2 0.945 116.9 32.4 -49.4 -60.5 1.0 11.7 -2.6 13 13 A L H X S+ 0 0 0 -4,-2.4 4,-3.2 2,-0.2 -1,-0.2 0.815 112.3 61.6 -73.7 -29.0 4.6 10.7 -2.2 14 14 A N H < S+ 0 0 34 -4,-2.8 -1,-0.2 -5,-0.3 -2,-0.2 0.937 112.7 39.6 -60.4 -47.8 5.5 11.0 -6.0 15 15 A E H < S+ 0 0 118 -4,-2.5 -2,-0.2 -14,-0.2 -1,-0.2 0.959 118.9 46.4 -55.7 -59.0 4.5 14.7 -5.8 16 16 A I H < S+ 0 0 85 -4,-2.3 -2,-0.2 -5,-0.3 -3,-0.2 0.877 136.8 6.2 -58.2 -42.2 6.2 15.2 -2.3 17 17 A K < - 0 0 59 -4,-3.2 2,-2.1 -5,-0.1 3,-0.3 -0.778 63.6-169.3-143.9 91.1 9.5 13.4 -3.3 18 18 A P S S+ 0 0 110 0, 0.0 -4,-0.1 0, 0.0 -3,-0.1 -0.266 78.5 66.3 -76.7 52.1 9.7 12.3 -7.0 19 19 A G + 0 0 45 -2,-2.1 2,-0.3 22,-0.0 -5,-0.1 -0.056 60.1 145.4-172.5 48.6 12.8 10.2 -6.1 20 20 A L - 0 0 14 -3,-0.3 2,-0.5 23,-0.0 22,-0.2 -0.730 36.1-143.0 -96.2 154.1 12.2 7.2 -3.8 21 21 A Q E -A 41 0A 101 20,-1.8 20,-2.3 -2,-0.3 2,-0.3 -0.954 16.5-162.6-126.1 108.9 14.0 3.9 -4.0 22 22 A Y E -A 40 0A 73 -2,-0.5 2,-0.3 18,-0.2 18,-0.2 -0.758 7.1-174.0-104.5 135.8 12.0 0.6 -3.3 23 23 A M E -A 39 0A 118 16,-2.1 16,-2.5 -2,-0.3 2,-0.6 -0.997 20.0-134.0-133.3 135.3 13.4 -2.9 -2.4 24 24 A L E -A 38 0A 55 -2,-0.3 2,-0.3 14,-0.2 14,-0.2 -0.817 15.3-162.9-104.5 117.1 11.4 -6.2 -2.1 25 25 A L E -A 37 0A 59 12,-3.2 12,-2.2 -2,-0.6 -2,-0.0 -0.831 53.1 -54.2-114.6 135.8 12.2 -8.3 1.0 26 26 A S E - 0 0 100 -2,-0.3 -1,-0.1 10,-0.2 12,-0.1 0.183 44.1-122.4 -75.4 135.9 11.0 -11.6 0.5 27 27 A Q E + 0 0 91 9,-0.1 9,-0.2 1,-0.1 2,-0.2 -0.102 53.4 131.1 -32.9 125.8 7.6 -13.0 -0.4 28 28 A T E +A 35 0A 90 7,-2.2 7,-2.1 5,-0.0 -1,-0.1 -0.632 25.1 165.5-155.8-159.1 6.3 -15.4 2.3 29 29 A G - 0 0 34 5,-0.2 2,-0.7 -2,-0.2 6,-0.1 -0.696 50.1 -61.7 150.7 178.5 2.9 -15.7 4.2 30 30 A P S S- 0 0 78 0, 0.0 2,-1.2 0, 0.0 -1,-0.1 0.033 73.0-109.3 -71.9 23.8 0.2 -17.4 6.4 31 31 A V S S+ 0 0 153 -2,-0.7 -2,-0.0 2,-0.4 0, 0.0 -0.070 118.3 57.4 69.7 -29.3 -0.3 -20.2 3.7 32 32 A H S S+ 0 0 173 -2,-1.2 -1,-0.2 1,-0.2 -3,-0.0 0.389 113.6 36.3-108.9 -1.1 -3.8 -18.8 2.8 33 33 A A S S- 0 0 33 2,-0.0 -2,-0.4 0, 0.0 -1,-0.2 -0.974 77.5-130.0-142.8 135.3 -2.3 -15.3 1.9 34 34 A P - 0 0 68 0, 0.0 2,-0.3 0, 0.0 -5,-0.2 -0.498 26.1-161.7 -62.8 153.7 0.9 -14.2 0.2 35 35 A L E +A 28 0A 46 -7,-2.1 -7,-2.2 -2,-0.1 2,-0.3 -0.922 11.0 178.7-147.1 127.0 2.9 -11.5 2.0 36 36 A F E - B 0 51A 34 15,-2.8 15,-2.6 -2,-0.3 2,-0.4 -0.887 12.9-151.9-120.3 145.5 5.6 -9.2 0.6 37 37 A V E -AB 25 50A 34 -12,-2.2 -12,-3.2 -2,-0.3 2,-0.4 -0.987 6.9-163.8-121.6 135.2 7.6 -6.4 2.4 38 38 A M E -AB 24 49A 25 11,-2.7 11,-2.6 -2,-0.4 2,-0.5 -0.959 8.4-154.2-111.7 135.7 9.1 -3.3 0.6 39 39 A S E -AB 23 48A 13 -16,-2.5 -16,-2.1 -2,-0.4 2,-0.4 -0.933 17.6-164.8 -99.9 122.0 11.7 -1.0 2.1 40 40 A V E -AB 22 47A 0 7,-2.7 7,-2.6 -2,-0.5 2,-0.5 -0.947 9.3-144.0-117.6 132.3 11.5 2.4 0.5 41 41 A E E +AB 21 46A 48 -20,-2.3 -20,-1.8 -2,-0.4 5,-0.2 -0.831 24.8 166.4-108.2 126.1 14.2 5.0 0.8 42 42 A V S S- 0 0 5 3,-2.0 -1,-0.1 -2,-0.5 4,-0.1 0.487 74.5 -12.0-120.3 -14.2 13.2 8.6 1.1 43 43 A N S S- 0 0 95 2,-0.5 3,-0.1 0, 0.0 -2,-0.0 0.310 127.8 -41.3-172.8 -3.4 16.2 10.8 2.2 44 44 A G S S+ 0 0 71 1,-0.4 2,-0.3 0, 0.0 -3,-0.1 0.301 122.1 75.3 133.0 -6.4 19.1 8.5 3.4 45 45 A Q S S- 0 0 84 -5,-0.0 -3,-2.0 2,-0.0 -2,-0.5 -0.978 71.8-128.4-141.3 144.5 16.9 6.0 5.3 46 46 A V E -B 41 0A 84 -2,-0.3 2,-0.4 -5,-0.2 -5,-0.3 -0.800 13.4-155.0-105.0 138.8 14.5 3.1 4.3 47 47 A F E -B 40 0A 40 -7,-2.6 -7,-2.7 -2,-0.4 2,-0.4 -0.961 14.8-141.4-118.2 121.9 11.0 2.7 5.5 48 48 A E E +B 39 0A 115 -2,-0.4 2,-0.4 -9,-0.2 -9,-0.2 -0.779 21.2 175.0-104.3 129.3 9.4 -0.8 5.5 49 49 A G E -B 38 0A 2 -11,-2.6 -11,-2.7 -2,-0.4 2,-0.4 -0.990 18.2-143.1-134.1 136.4 5.8 -1.6 4.7 50 50 A S E +B 37 0A 60 -2,-0.4 -13,-0.2 -13,-0.2 4,-0.1 -0.830 23.2 166.4-104.7 131.5 4.0 -5.1 4.3 51 51 A G E -B 36 0A 0 -15,-2.6 -15,-2.8 -2,-0.4 6,-0.2 -0.996 47.6-120.9-139.7 146.4 1.3 -6.0 1.7 52 52 A P S S+ 0 0 70 0, 0.0 2,-0.3 0, 0.0 -15,-0.1 0.446 110.6 36.5 -64.5 2.7 -0.3 -9.2 0.5 53 53 A T S >> S- 0 0 55 -17,-0.2 4,-2.3 1,-0.0 3,-1.2 -0.961 90.9-119.3-146.1 146.5 1.1 -8.0 -2.9 54 54 A K H 3> S+ 0 0 104 -2,-0.3 4,-2.6 1,-0.3 5,-0.2 0.822 115.3 58.1 -53.3 -33.8 4.4 -6.2 -3.6 55 55 A K H 3> S+ 0 0 134 2,-0.2 4,-1.1 1,-0.2 -1,-0.3 0.781 110.3 42.4 -68.8 -29.6 2.4 -3.2 -5.0 56 56 A K H <> S+ 0 0 113 -3,-1.2 4,-2.7 2,-0.2 -2,-0.2 0.812 111.1 56.7 -83.9 -33.0 0.5 -2.9 -1.7 57 57 A A H X S+ 0 0 0 -4,-2.3 4,-2.6 2,-0.2 -2,-0.2 0.972 110.4 42.8 -60.4 -56.4 3.8 -3.4 0.3 58 58 A K H X S+ 0 0 29 -4,-2.6 4,-2.9 2,-0.2 5,-0.3 0.882 112.8 54.4 -56.0 -40.9 5.5 -0.4 -1.5 59 59 A L H X S+ 0 0 42 -4,-1.1 4,-3.0 -5,-0.2 5,-0.2 0.956 110.8 45.6 -54.5 -52.4 2.3 1.6 -1.1 60 60 A H H X S+ 0 0 67 -4,-2.7 4,-2.3 2,-0.2 5,-0.2 0.920 116.3 45.9 -55.5 -50.2 2.4 0.9 2.7 61 61 A A H X S+ 0 0 0 -4,-2.6 4,-2.5 -12,-0.2 -2,-0.2 0.961 118.2 40.2 -55.4 -61.2 6.2 1.7 2.9 62 62 A A H X S+ 0 0 0 -4,-2.9 4,-2.3 2,-0.2 5,-0.3 0.841 112.8 55.7 -62.7 -40.4 5.9 5.0 0.8 63 63 A E H X S+ 0 0 52 -4,-3.0 4,-2.7 -5,-0.3 -2,-0.2 0.981 116.2 36.8 -55.1 -62.4 2.6 6.1 2.4 64 64 A K H X S+ 0 0 37 -4,-2.3 4,-3.3 -5,-0.2 5,-0.4 0.849 111.2 63.5 -55.6 -41.2 4.3 5.9 5.9 65 65 A A H X S+ 0 0 0 -4,-2.5 4,-2.3 -5,-0.2 -2,-0.2 0.967 115.3 28.9 -55.3 -58.9 7.6 7.2 4.5 66 66 A L H X S+ 0 0 1 -4,-2.3 4,-2.2 2,-0.2 5,-0.2 0.908 121.9 52.6 -66.0 -44.1 6.2 10.6 3.6 67 67 A R H X>S+ 0 0 82 -4,-2.7 4,-2.5 -5,-0.3 5,-1.0 0.948 114.4 42.4 -55.4 -52.7 3.4 10.6 6.3 68 68 A S H <5S+ 0 0 31 -4,-3.3 4,-0.4 3,-0.2 -2,-0.2 0.938 115.6 50.4 -55.5 -50.4 6.0 9.9 9.1 69 69 A F H <5S+ 0 0 91 -4,-2.3 -2,-0.2 -5,-0.4 -1,-0.2 0.786 118.6 38.0 -60.3 -32.2 8.5 12.4 7.4 70 70 A V H <5S- 0 0 101 -4,-2.2 -2,-0.2 -3,-0.1 -1,-0.2 0.813 142.9 -11.2 -88.6 -34.3 5.7 15.1 7.3 71 71 A Q T <5S- 0 0 140 -4,-2.5 -3,-0.2 -5,-0.2 -2,-0.1 0.645 96.0-111.1-138.7 -33.9 3.9 14.6 10.6 72 72 A F < 0 0 162 -5,-1.0 -4,-0.1 -4,-0.4 -3,-0.0 0.292 360.0 360.0 54.1 159.3 4.7 11.3 12.5 73 73 A P 0 0 113 0, 0.0 -1,-0.2 0, 0.0 -4,-0.1 0.486 360.0 360.0 -66.2 360.0 4.0 8.5 13.6