==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 05-OCT-05 2B7V . COMPND 2 MOLECULE: DOUBLE-STRANDED RNA-SPECIFIC EDITASE 1; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR R.STEFL,M.XU,L.SKRISOVSKA,R.B.EMESON,F.H.-T.ALLAIN . 71 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4353.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 47 66.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 19.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 23 32.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A P 0 0 104 0, 0.0 2,-0.3 0, 0.0 4,-0.1 0.000 360.0 360.0 360.0 160.2 -26.0 4.2 -12.7 2 2 A S + 0 0 107 2,-0.3 2,-1.7 3,-0.0 0, 0.0 -0.966 360.0 16.4-158.3 156.4 -26.3 3.6 -8.9 3 3 A G S S+ 0 0 86 -2,-0.3 2,-0.3 6,-0.0 0, 0.0 -0.240 125.5 11.1 76.0 -45.7 -29.1 3.1 -6.3 4 4 A K S S- 0 0 85 -2,-1.7 -2,-0.3 0, 0.0 5,-0.0 -0.899 99.4 -70.1-141.5 170.9 -31.7 2.2 -9.0 5 5 A N > - 0 0 82 -2,-0.3 4,-1.2 1,-0.1 3,-0.4 -0.476 54.7-117.7 -54.8 138.7 -32.1 1.4 -12.7 6 6 A P H > S+ 0 0 7 0, 0.0 4,-2.4 0, 0.0 5,-0.2 0.790 111.5 61.8 -63.7 -29.7 -31.3 4.7 -14.5 7 7 A V H > S+ 0 0 31 45,-0.2 4,-2.9 1,-0.2 5,-0.1 0.959 103.2 51.6 -55.1 -51.5 -34.8 5.0 -16.1 8 8 A M H > S+ 0 0 85 -3,-0.4 4,-2.8 1,-0.2 -1,-0.2 0.839 109.9 48.2 -55.3 -44.3 -36.2 5.2 -12.6 9 9 A I H X S+ 0 0 28 -4,-1.2 4,-2.9 2,-0.2 5,-0.3 0.960 113.3 45.9 -58.2 -57.8 -33.8 8.0 -11.5 10 10 A L H X S+ 0 0 3 -4,-2.4 4,-1.7 1,-0.2 -2,-0.2 0.901 114.4 51.9 -55.3 -38.5 -34.6 10.1 -14.7 11 11 A N H < S+ 0 0 80 -4,-2.9 3,-0.3 -5,-0.2 -2,-0.2 0.953 113.4 41.4 -55.1 -61.3 -38.2 9.3 -14.0 12 12 A E H < S+ 0 0 87 -4,-2.8 -2,-0.2 1,-0.2 -3,-0.2 0.956 121.3 42.0 -55.6 -56.5 -38.1 10.5 -10.3 13 13 A L H < S+ 0 0 78 -4,-2.9 -1,-0.2 -5,-0.1 -2,-0.2 0.682 75.6 162.4 -55.9 -29.2 -35.9 13.6 -11.2 14 14 A R < - 0 0 143 -4,-1.7 -3,-0.1 -5,-0.3 -4,-0.1 0.463 18.6-170.2 -9.2 75.9 -38.0 14.5 -14.4 15 15 A P - 0 0 46 0, 0.0 -1,-0.1 0, 0.0 24,-0.1 0.791 68.3 -50.3 -58.0 -34.5 -36.7 18.1 -14.6 16 16 A G S S+ 0 0 66 22,-0.1 2,-0.1 2,-0.0 -2,-0.1 0.187 96.5 145.7 177.6 30.1 -39.1 19.2 -17.4 17 17 A L - 0 0 29 23,-0.1 2,-0.3 20,-0.0 22,-0.2 -0.347 35.4-154.3 -96.5 164.1 -38.7 16.5 -20.0 18 18 A K E -A 38 0A 99 20,-2.1 20,-2.2 -2,-0.1 2,-0.4 -0.993 14.5-139.4-135.1 141.3 -40.8 14.5 -22.6 19 19 A Y E -A 37 0A 77 -2,-0.3 2,-0.4 18,-0.2 18,-0.2 -0.843 6.4-161.0-104.5 135.2 -40.2 11.1 -24.1 20 20 A D E -A 36 0A 58 16,-2.9 16,-2.3 -2,-0.4 2,-0.6 -0.947 14.1-144.3-104.8 135.3 -40.6 9.9 -27.7 21 21 A F E +A 35 0A 119 -2,-0.4 2,-0.3 14,-0.2 14,-0.2 -0.904 27.5 169.8-104.4 119.9 -40.9 6.1 -28.4 22 22 A L E -A 34 0A 57 12,-2.9 12,-3.1 -2,-0.6 2,-0.3 -0.935 23.7-146.6-123.2 136.0 -39.2 5.0 -31.6 23 23 A S E +A 33 0A 54 -2,-0.3 10,-0.2 10,-0.2 24,-0.0 -0.769 58.5 69.0 -85.4 159.9 -38.5 1.6 -33.0 24 24 A E + 0 0 115 8,-1.9 9,-0.2 -2,-0.3 -1,-0.1 0.952 30.8 116.3 100.0 80.3 -35.4 0.9 -35.1 25 25 A S + 0 0 70 7,-1.1 8,-0.1 2,-0.1 3,-0.1 0.189 68.7 164.8-121.1 5.9 -31.7 0.9 -34.2 26 26 A G - 0 0 13 6,-0.7 2,-0.1 1,-0.2 -1,-0.1 0.033 67.2-161.0 50.6-159.1 -31.6 -2.9 -35.1 27 27 A E >> - 0 0 82 5,-0.1 4,-1.7 4,-0.1 3,-0.5 0.640 45.9-129.1 -59.8 163.3 -30.1 -5.4 -35.8 28 28 A S T 34 S+ 0 0 107 1,-0.2 -2,-0.0 2,-0.1 0, 0.0 0.145 97.8 57.7 -70.1 18.9 -33.2 -7.1 -37.4 29 29 A H T 34 S+ 0 0 169 -2,-0.5 -1,-0.2 0, 0.0 -3,-0.0 0.711 124.3 7.1-130.3 -38.4 -32.7 -10.3 -35.3 30 30 A A T <4 S- 0 0 64 -3,-0.5 -2,-0.1 2,-0.0 -4,-0.0 0.418 106.2-145.8-131.2 -6.2 -32.7 -9.4 -31.5 31 31 A K < - 0 0 64 -4,-1.7 2,-0.4 1,-0.1 -3,-0.1 0.665 14.7-119.3 84.7 149.1 -33.8 -5.7 -32.1 32 32 A S - 0 0 7 -5,-0.1 -8,-1.9 17,-0.0 -7,-1.1 -0.993 13.1-162.0-129.6 135.2 -33.4 -2.2 -30.8 33 33 A F E -AB 23 48A 50 15,-3.0 15,-3.1 -2,-0.4 2,-0.4 -0.798 22.0-140.4-104.6 135.6 -36.2 0.1 -29.5 34 34 A V E -AB 22 47A 13 -12,-3.1 -12,-2.9 -2,-0.4 2,-0.5 -0.910 12.8-162.7-115.9 130.1 -35.2 3.7 -29.5 35 35 A M E -AB 21 46A 7 11,-2.8 11,-2.2 -2,-0.4 2,-0.4 -0.963 5.3-167.3-115.1 123.9 -36.0 6.3 -26.8 36 36 A S E -AB 20 45A 3 -16,-2.3 -16,-2.9 -2,-0.5 2,-0.4 -0.865 4.1-169.1-104.9 136.6 -35.7 10.1 -27.5 37 37 A V E -AB 19 44A 1 7,-2.1 7,-2.2 -2,-0.4 2,-0.5 -0.999 12.6-162.9-122.0 135.9 -35.9 12.7 -24.7 38 38 A V E +AB 18 43A 53 -20,-2.2 -20,-2.1 -2,-0.4 5,-0.2 -0.973 31.9 146.1-104.5 128.5 -36.2 16.5 -25.0 39 39 A V + 0 0 17 3,-2.3 2,-2.0 -2,-0.5 -1,-0.1 0.258 61.3 7.5-126.7-111.0 -35.1 18.2 -21.6 40 40 A D S S- 0 0 78 1,-0.2 3,-0.1 31,-0.1 -23,-0.1 -0.207 127.4 -60.6 -81.1 45.2 -33.4 21.6 -20.9 41 41 A G S S+ 0 0 72 -2,-2.0 2,-0.3 1,-0.3 -1,-0.2 0.609 119.0 115.7 80.4 14.0 -33.5 22.8 -24.5 42 42 A Q - 0 0 80 2,-0.0 -3,-2.3 20,-0.0 2,-0.4 -0.820 54.2-149.3-119.1 153.1 -31.4 19.6 -25.2 43 43 A F E +B 38 0A 121 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.2 -0.983 14.5 175.8-134.0 134.6 -32.1 16.4 -27.2 44 44 A F E -B 37 0A 30 -7,-2.2 -7,-2.1 -2,-0.4 2,-0.3 -0.952 13.5-158.2-135.2 154.6 -30.9 12.7 -26.7 45 45 A E E -B 36 0A 87 -2,-0.3 2,-0.4 -9,-0.2 -9,-0.2 -0.997 9.1-170.0-134.7 134.8 -31.6 9.3 -28.4 46 46 A G E -B 35 0A 3 -11,-2.2 -11,-2.8 -2,-0.3 2,-0.6 -0.989 9.2-153.0-135.0 122.2 -30.9 5.9 -26.7 47 47 A S E +B 34 0A 28 -2,-0.4 2,-0.3 -13,-0.2 -13,-0.2 -0.860 26.4 161.6-105.7 114.5 -31.0 2.5 -28.4 48 48 A G E -B 33 0A 1 -15,-3.1 -15,-3.0 -2,-0.6 6,-0.1 -0.983 55.1-111.9-135.6 145.3 -32.0 -0.6 -26.3 49 49 A R S S- 0 0 93 -2,-0.3 2,-0.2 -17,-0.2 -15,-0.1 0.687 107.8 -12.5 -46.5 -24.1 -33.2 -4.2 -26.6 50 50 A N S >> S- 0 0 60 -17,-0.2 4,-2.9 -18,-0.0 3,-2.6 -0.925 89.6 -80.7-158.2 177.7 -36.4 -2.8 -25.0 51 51 A K H 3>>S+ 0 0 71 1,-0.3 4,-2.0 2,-0.2 5,-0.6 0.811 122.3 68.6 -49.3 -36.2 -37.5 0.5 -23.1 52 52 A K H 345S+ 0 0 132 1,-0.2 -1,-0.3 3,-0.2 -45,-0.2 0.594 120.0 21.2 -55.4 -13.1 -35.9 -0.8 -19.9 53 53 A L H <>5S+ 0 0 64 -3,-2.6 4,-2.7 3,-0.1 -2,-0.2 0.602 121.6 56.5-125.5 -42.7 -32.6 -0.3 -21.8 54 54 A A H X5S+ 0 0 0 -4,-2.9 4,-2.6 1,-0.2 -19,-0.2 0.965 115.1 41.7 -55.5 -54.6 -33.5 2.3 -24.5 55 55 A K H X5S+ 0 0 34 -4,-2.0 4,-3.4 2,-0.2 5,-0.2 0.870 111.4 57.9 -55.5 -42.5 -34.7 4.6 -21.8 56 56 A A H >S+ 0 0 4 -4,-2.7 5,-2.2 1,-0.2 4,-0.8 0.864 113.4 54.0 -55.5 -40.8 -28.2 18.0 -17.3 67 67 A F H ><5S+ 0 0 81 -4,-2.4 3,-0.5 -5,-0.4 -1,-0.2 0.899 106.2 52.6 -60.5 -40.2 -26.5 17.0 -14.0 68 68 A N H 3<5S+ 0 0 113 -4,-1.9 -2,-0.2 -3,-0.4 -1,-0.2 0.842 110.3 48.1 -55.5 -35.1 -23.4 18.8 -15.4 69 69 A L H 3<5S- 0 0 74 -4,-1.6 -2,-0.2 2,-0.2 -1,-0.2 0.638 115.3-126.9 -72.0 -16.5 -25.8 21.8 -15.9 70 70 A H T <<5 0 0 172 -4,-0.8 -3,-0.2 -3,-0.5 -2,-0.1 0.853 360.0 360.0 66.4 41.6 -26.9 21.1 -12.3 71 71 A L < 0 0 98 -5,-2.2 -1,-0.2 -6,-0.1 -2,-0.2 -0.973 360.0 360.0-127.7 360.0 -30.6 20.8 -13.6