==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER BIOSYNTHETIC PROTEIN 06-OCT-05 2B8F . COMPND 2 MOLECULE: BIOTIN/LIPOYL ATTACHMENT PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; . AUTHOR G.CUI,B.XIA,C.JIN . 72 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4623.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 43 59.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 38.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 3 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A T 0 0 75 0, 0.0 2,-0.4 0, 0.0 65,-0.2 0.000 360.0 360.0 360.0 155.9 1.1 -1.7 -3.4 2 3 A V E +A 65 0A 4 63,-2.1 62,-3.0 40,-0.1 63,-1.8 -0.983 360.0 178.2-126.7 143.6 0.4 1.4 -5.6 3 4 A S E -A 63 0A 39 -2,-0.4 60,-0.3 60,-0.3 2,-0.1 -0.913 32.7 -95.4-145.5 156.8 1.1 1.3 -9.4 4 5 A I - 0 0 2 58,-2.9 57,-2.7 55,-0.3 58,-0.2 -0.394 25.0-151.6 -76.2 158.2 0.8 3.4 -12.6 5 6 A Q + 0 0 119 55,-0.3 2,-0.3 56,-0.1 55,-0.3 0.315 69.3 28.7-120.5 2.6 -2.3 2.9 -14.7 6 7 A M S S- 0 0 43 53,-0.3 2,-0.2 56,-0.1 56,-0.1 -0.967 87.4 -87.0-159.2 158.1 -1.1 3.7 -18.3 7 8 A A S S+ 0 0 50 -2,-0.3 2,-0.3 52,-0.2 52,-0.2 -0.503 73.6 92.2 -68.5 146.6 2.1 3.8 -20.4 8 9 A G E S-C 58 0B 11 50,-1.7 50,-2.0 -2,-0.2 2,-0.4 -0.983 75.0 -68.0 165.7-158.8 4.3 6.9 -20.2 9 10 A N E -CD 57 31B 69 22,-2.4 22,-3.2 -2,-0.3 2,-1.8 -0.985 46.9-113.8-126.5 139.1 7.2 8.4 -18.3 10 11 A L E - 0 0 0 46,-2.9 45,-2.6 -2,-0.4 46,-0.5 -0.527 30.9-166.1 -83.0 79.2 6.9 9.3 -14.6 11 12 A W E - 0 0 107 -2,-1.8 2,-0.3 43,-0.2 -1,-0.2 0.779 64.8 -15.9 -34.8 -56.0 7.1 13.2 -15.0 12 13 A K E - D 0 29B 94 17,-1.1 17,-2.4 42,-0.2 2,-0.3 -0.955 57.6-148.4-148.2 164.5 7.7 13.8 -11.2 13 14 A V E - D 0 28B 24 -2,-0.3 15,-0.3 15,-0.3 41,-0.1 -0.951 4.0-169.0-136.1 148.4 7.2 11.9 -7.9 14 15 A H + 0 0 80 13,-2.6 2,-0.2 -2,-0.3 14,-0.1 0.320 57.3 83.6-126.5 2.3 6.4 13.5 -4.5 15 16 A V - 0 0 21 12,-0.5 2,-0.3 4,-0.1 -2,-0.1 -0.621 45.3-177.0-106.9 166.5 6.9 10.6 -1.9 16 17 A K > - 0 0 150 -2,-0.2 3,-2.0 33,-0.1 31,-0.3 -0.937 47.7 -74.2-149.1 161.2 9.9 9.2 -0.0 17 18 A A T 3 S+ 0 0 67 -2,-0.3 31,-0.2 1,-0.3 32,-0.1 -0.418 122.6 27.6 -57.8 132.5 10.3 6.3 2.4 18 19 A G T 3 S+ 0 0 59 29,-3.0 -1,-0.3 1,-0.4 30,-0.1 0.270 94.2 119.5 92.2 -7.6 8.8 7.3 5.7 19 20 A D < - 0 0 55 -3,-2.0 28,-2.9 28,-0.2 -1,-0.4 -0.281 58.2-129.6 -71.6 172.1 6.3 9.8 4.2 20 21 A Q E -F 46 0C 105 26,-0.3 2,-0.3 -3,-0.1 26,-0.2 -0.973 21.1-172.5-126.8 144.0 2.5 9.3 4.6 21 22 A I E -F 45 0C 0 24,-2.8 24,-2.3 -2,-0.4 2,-0.3 -0.858 9.7-149.7-128.9 163.3 -0.2 9.3 1.9 22 23 A E > - 0 0 128 22,-0.3 3,-2.7 -2,-0.3 19,-0.4 -0.964 42.1 -79.7-134.6 145.4 -4.1 9.2 2.0 23 24 A K T 3 S+ 0 0 142 -2,-0.3 19,-0.2 1,-0.3 21,-0.1 -0.223 119.2 13.9 -49.3 126.0 -6.5 7.7 -0.5 24 25 A G T 3 S+ 0 0 50 17,-2.6 -1,-0.3 1,-0.3 2,-0.1 0.279 92.7 131.9 86.3 -7.1 -6.9 10.2 -3.5 25 26 A Q < - 0 0 81 -3,-2.7 16,-2.7 16,-0.1 -1,-0.3 -0.486 67.2-103.4 -65.1 145.0 -3.9 12.3 -2.5 26 27 A E E + E 0 40B 93 14,-0.2 14,-0.3 1,-0.1 -4,-0.1 -0.397 45.5 166.1 -63.2 148.5 -1.5 13.1 -5.4 27 28 A V E - 0 0 0 12,-2.5 -13,-2.6 1,-0.6 -12,-0.5 0.515 61.6 -11.1-138.7 -31.1 1.7 11.0 -5.3 28 29 A A E -DE 13 39B 0 11,-1.4 11,-2.7 -15,-0.3 -1,-0.6 -0.915 59.4-122.4-158.8 178.7 3.3 11.5 -8.8 29 30 A I E -DE 12 38B 28 -17,-2.4 -17,-1.1 9,-0.3 2,-0.4 -0.974 19.4-148.6-135.7 147.0 2.6 12.8 -12.3 30 31 A L E - E 0 37B 0 7,-2.9 7,-2.6 -2,-0.3 2,-0.5 -0.967 3.4-148.9-123.4 125.2 2.7 10.8 -15.6 31 32 A E E +DE 9 36B 91 -22,-3.2 -22,-2.4 -2,-0.4 2,-0.3 -0.893 44.9 120.5 -95.1 123.1 3.7 12.3 -19.0 32 33 A S E > + E 0 35B 31 3,-1.8 3,-2.2 -2,-0.5 -24,-0.1 -0.936 54.4 37.7-167.4 167.2 1.9 10.5 -21.9 33 34 A M T 3 S- 0 0 135 1,-0.3 3,-0.1 -2,-0.3 -25,-0.0 0.776 127.2 -69.0 55.9 29.1 -0.5 11.3 -24.7 34 35 A K T 3 S+ 0 0 213 1,-0.2 -1,-0.3 0, 0.0 2,-0.3 0.825 121.4 87.9 49.6 38.7 1.4 14.7 -25.1 35 36 A M E < S-E 32 0B 127 -3,-2.2 -3,-1.8 -5,-0.0 2,-0.4 -0.863 77.8-119.3-139.0 176.0 -0.1 15.7 -21.7 36 37 A E E -E 31 0B 112 -2,-0.3 -5,-0.2 -5,-0.2 -3,-0.0 -0.981 29.4-171.6-121.0 139.4 0.7 15.4 -18.0 37 38 A I E -E 30 0B 42 -7,-2.6 -7,-2.9 -2,-0.4 -26,-0.1 -0.989 22.6-116.1-134.5 132.3 -1.8 13.5 -15.8 38 39 A P E -E 29 0B 69 0, 0.0 2,-0.4 0, 0.0 -9,-0.3 -0.334 17.6-145.5 -68.2 157.2 -1.7 13.2 -12.0 39 40 A I E -E 28 0B 1 -11,-2.7 -12,-2.5 -35,-0.0 -11,-1.4 -0.985 20.1-163.7-121.9 132.6 -1.3 9.9 -10.2 40 41 A V E -E 26 0B 61 -2,-0.4 2,-0.3 -14,-0.3 -14,-0.2 -0.846 28.3 -91.0-125.7 152.5 -3.2 9.5 -6.9 41 42 A A - 0 0 3 -16,-2.7 -17,-2.6 -19,-0.4 -16,-0.1 -0.476 22.4-154.8 -68.5 124.0 -2.9 7.1 -4.0 42 43 A D S S+ 0 0 94 -2,-0.3 2,-0.3 -19,-0.2 -1,-0.2 0.733 81.6 0.4 -65.3 -23.8 -5.1 4.0 -4.4 43 44 A R S S- 0 0 92 -21,-0.1 -1,-0.1 -18,-0.1 2,-0.1 -0.957 83.6 -96.3-158.2 159.7 -5.1 3.7 -0.5 44 45 A S + 0 0 49 -2,-0.3 -22,-0.3 -22,-0.1 2,-0.2 -0.401 57.8 117.5 -74.4 162.2 -3.7 5.5 2.6 45 46 A G E -F 21 0C 10 -24,-2.3 -24,-2.8 -2,-0.1 2,-0.3 -0.816 64.2 -77.0 162.8 168.6 -0.5 4.4 4.3 46 47 A I E -F 20 0C 78 -26,-0.2 22,-2.6 -2,-0.2 2,-0.6 -0.724 55.4-113.2 -76.0 139.8 3.1 5.1 5.4 47 48 A V E -B 67 0A 1 -28,-2.9 -29,-3.0 -2,-0.3 20,-0.3 -0.693 33.4-178.2 -77.9 117.3 5.4 4.8 2.4 48 49 A K E - 0 0 109 18,-1.9 2,-0.3 -2,-0.6 19,-0.2 0.874 68.6 -18.5 -81.9 -41.5 7.7 1.8 3.0 49 50 A E E -B 66 0A 94 17,-1.5 17,-2.7 -32,-0.1 2,-0.4 -0.969 57.6-129.9-160.0 159.1 9.7 2.3 -0.2 50 51 A V E -B 65 0A 37 -2,-0.3 15,-0.3 15,-0.2 -33,-0.1 -0.967 11.4-165.9-119.0 133.2 9.4 4.0 -3.7 51 52 A K + 0 0 95 13,-2.5 2,-0.2 -2,-0.4 14,-0.2 0.396 67.2 45.3-100.6 -2.1 10.1 1.8 -6.8 52 53 A K - 0 0 38 12,-0.8 2,-0.3 4,-0.0 12,-0.1 -0.803 61.3-153.6-138.2 172.9 10.4 4.7 -9.3 53 54 A K > - 0 0 137 -2,-0.2 3,-1.9 -41,-0.0 -43,-0.2 -0.908 44.3 -60.9-145.7 167.7 12.0 8.1 -9.9 54 55 A E T 3 S+ 0 0 124 -2,-0.3 -43,-0.2 1,-0.3 -42,-0.2 -0.299 120.2 7.8 -54.9 128.1 11.4 11.3 -11.9 55 56 A G T 3 S+ 0 0 43 -45,-2.6 -1,-0.3 1,-0.2 -44,-0.2 0.405 92.6 140.4 81.5 0.1 11.5 10.7 -15.7 56 57 A D < - 0 0 56 -3,-1.9 -46,-2.9 -46,-0.5 -1,-0.2 -0.373 60.3 -98.7 -71.8 154.1 11.6 6.8 -15.4 57 58 A F E +C 9 0B 117 -48,-0.2 2,-0.3 -2,-0.1 -48,-0.2 -0.482 47.9 178.8 -67.0 143.1 9.6 4.6 -17.8 58 59 A V E -C 8 0B 0 -50,-2.0 -50,-1.7 -2,-0.2 2,-0.3 -0.933 8.1-171.7-145.2 162.9 6.3 3.3 -16.4 59 60 A N > - 0 0 66 -2,-0.3 3,-2.1 -52,-0.2 2,-0.3 -0.907 43.1 -61.5-149.0 171.4 3.4 1.2 -17.6 60 61 A E T 3 S+ 0 0 152 -55,-0.3 -55,-0.3 1,-0.3 3,-0.1 -0.483 126.5 6.6 -62.7 120.5 -0.1 -0.1 -16.8 61 62 A G T 3 S+ 0 0 56 -57,-2.7 2,-0.3 -2,-0.3 -1,-0.3 0.412 94.1 140.6 83.3 0.6 0.2 -2.1 -13.6 62 63 A D < - 0 0 53 -3,-2.1 -58,-2.9 -58,-0.2 -1,-0.3 -0.632 59.1-107.0 -78.5 128.9 3.9 -1.1 -13.2 63 64 A V E +A 3 0A 46 -2,-0.3 -60,-0.3 -60,-0.3 -1,-0.1 -0.248 36.1 177.6 -65.2 144.0 4.6 -0.4 -9.5 64 65 A L E - 0 0 0 -62,-3.0 -13,-2.5 1,-0.4 -12,-0.8 0.750 64.8 -20.6-103.1 -48.7 5.1 3.1 -8.1 65 66 A L E -AB 2 50A 0 -63,-1.8 -63,-2.1 -15,-0.3 -1,-0.4 -0.955 50.1-129.7-160.3 170.4 5.6 2.4 -4.3 66 67 A E E - B 0 49A 47 -17,-2.7 -18,-1.9 -2,-0.3 -17,-1.5 -0.874 25.7-146.4-132.1 156.9 5.1 0.1 -1.4 67 68 A L E > - B 0 47A 0 -20,-0.3 3,-0.8 -2,-0.3 -20,-0.3 -0.809 29.6-123.4-128.8 162.3 3.6 0.8 2.1 68 69 A S T 3 S+ 0 0 60 -22,-2.6 -21,-0.1 -2,-0.3 -23,-0.0 -0.071 120.8 44.1 -88.3 27.3 3.8 -0.0 5.8 69 70 A N T 3 S+ 0 0 76 -23,-0.3 2,-1.4 3,-0.1 -1,-0.2 0.126 71.5 133.0-151.2 12.8 0.0 -0.9 5.3 70 71 A S S < S- 0 0 33 -3,-0.8 -25,-0.1 1,-0.1 -2,-0.0 -0.079 94.2 -58.3 -77.4 42.7 0.1 -2.8 1.9 71 72 A T 0 0 100 -2,-1.4 -1,-0.1 -70,-0.0 -3,-0.0 0.824 360.0 360.0 82.0 28.2 -2.1 -5.6 3.2 72 73 A Q 0 0 179 0, 0.0 -3,-0.1 0, 0.0 -4,-0.0 0.936 360.0 360.0 36.4 360.0 -0.3 -6.8 5.8