==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA-BINDING DOMAIN 22-APR-98 1BA5 . COMPND 2 MOLECULE: HTRF1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.NISHIKAWA,A.NAGADOI,S.YOSHIMURA,S.AIMOTO,Y.NISHIMURA . 53 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4624.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 31 58.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 5.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 26 49.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R 0 0 289 0, 0.0 2,-2.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-110.6 -14.7 14.7 -3.7 2 2 A K - 0 0 218 1,-0.1 2,-0.3 2,-0.0 0, 0.0 -0.403 360.0 -7.5 62.2 -81.3 -13.3 16.5 -0.6 3 3 A R S S- 0 0 224 -2,-2.0 -1,-0.1 2,-0.0 2,-0.0 -0.910 71.9-139.6-150.5 117.2 -10.3 14.1 -0.1 4 4 A Q + 0 0 159 -2,-0.3 2,-0.3 1,-0.0 -2,-0.0 -0.294 26.5 174.6 -72.1 160.5 -9.7 10.8 -2.0 5 5 A A - 0 0 89 -2,-0.0 2,-0.0 0, 0.0 -2,-0.0 -0.973 30.9 -94.4-160.2 164.8 -8.5 7.7 -0.2 6 6 A W - 0 0 48 -2,-0.3 2,-0.2 1,-0.1 3,-0.0 -0.261 44.0-103.5 -78.8 170.9 -7.7 4.0 -0.7 7 7 A L > - 0 0 85 1,-0.1 4,-2.4 -2,-0.0 5,-0.2 -0.502 31.9-103.1 -94.1 165.6 -10.1 1.1 0.0 8 8 A W H > S+ 0 0 192 1,-0.2 4,-2.7 2,-0.2 5,-0.2 0.896 119.7 47.2 -54.2 -48.6 -10.0 -1.2 3.1 9 9 A E H > S+ 0 0 42 2,-0.2 4,-2.9 1,-0.2 -1,-0.2 0.919 111.6 50.2 -63.3 -45.3 -8.6 -4.2 1.1 10 10 A E H > S+ 0 0 5 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.920 113.9 45.0 -60.3 -45.6 -5.9 -2.1 -0.6 11 11 A D H X S+ 0 0 77 -4,-2.4 4,-2.8 1,-0.2 5,-0.3 0.948 114.2 49.3 -61.8 -49.5 -4.7 -0.6 2.7 12 12 A K H X S+ 0 0 83 -4,-2.7 4,-2.9 -5,-0.2 5,-0.3 0.889 109.9 52.7 -56.2 -43.5 -4.8 -4.0 4.4 13 13 A N H X S+ 0 0 5 -4,-2.9 4,-2.4 2,-0.2 5,-0.3 0.949 112.9 42.9 -58.7 -52.9 -2.8 -5.5 1.5 14 14 A L H X S+ 0 0 8 -4,-2.3 4,-2.8 2,-0.2 5,-0.4 0.972 118.9 42.8 -57.5 -59.9 -0.1 -2.8 1.8 15 15 A R H X S+ 0 0 140 -4,-2.8 4,-1.7 1,-0.2 -2,-0.2 0.932 118.8 43.5 -54.3 -54.3 0.1 -2.9 5.6 16 16 A S H < S+ 0 0 46 -4,-2.9 4,-0.5 -5,-0.3 -1,-0.2 0.835 121.9 40.6 -62.9 -35.6 -0.1 -6.7 5.9 17 17 A G H >X S+ 0 0 0 -4,-2.4 4,-2.7 -5,-0.3 3,-1.4 0.977 114.7 45.6 -77.9 -62.0 2.4 -7.2 3.1 18 18 A V H 3X S+ 0 0 1 -4,-2.8 4,-1.4 -5,-0.3 -3,-0.2 0.854 107.0 60.3 -51.7 -43.0 5.1 -4.5 3.6 19 19 A R H 3< S+ 0 0 191 -4,-1.7 -1,-0.3 -5,-0.4 -2,-0.2 0.794 117.8 29.6 -59.8 -30.5 5.3 -5.2 7.3 20 20 A K H <4 S+ 0 0 99 -3,-1.4 -2,-0.2 -4,-0.5 -1,-0.2 0.734 126.6 41.5-101.5 -28.2 6.4 -8.9 6.7 21 21 A Y H < S- 0 0 85 -4,-2.7 2,-0.2 1,-0.2 -3,-0.2 0.951 116.3 -85.5 -84.4 -56.5 8.2 -8.5 3.3 22 22 A G >< - 0 0 26 -4,-1.4 2,-1.6 -5,-0.2 3,-0.7 -0.639 24.7 -98.0 153.5 149.4 10.2 -5.3 3.8 23 23 A E T 3 S+ 0 0 103 1,-0.3 -4,-0.1 -2,-0.2 -5,-0.0 -0.347 118.0 41.1 -84.3 54.9 9.9 -1.5 3.5 24 24 A G T 3 S+ 0 0 58 -2,-1.6 -1,-0.3 -6,-0.1 3,-0.0 0.178 86.0 88.2 168.3 45.7 11.6 -1.5 0.1 25 25 A N <> + 0 0 61 -3,-0.7 4,-1.6 15,-0.1 3,-0.5 -0.281 35.6 148.5-151.5 51.0 10.2 -4.4 -2.0 26 26 A W H > + 0 0 32 1,-0.2 4,-2.7 2,-0.2 5,-0.2 0.768 68.4 65.8 -62.3 -28.9 7.1 -2.9 -3.7 27 27 A S H > S+ 0 0 85 1,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.942 104.7 43.3 -59.1 -49.0 7.6 -5.2 -6.7 28 28 A K H > S+ 0 0 83 -3,-0.5 4,-2.4 2,-0.2 5,-0.2 0.883 111.8 55.2 -64.3 -39.9 6.9 -8.3 -4.6 29 29 A I H X S+ 0 0 0 -4,-1.6 4,-1.7 1,-0.2 -2,-0.2 0.947 110.1 44.8 -57.2 -51.8 4.0 -6.5 -2.9 30 30 A L H < S+ 0 0 73 -4,-2.7 -1,-0.2 9,-0.2 -2,-0.2 0.824 110.8 57.3 -62.2 -33.6 2.4 -5.8 -6.3 31 31 A L H < S+ 0 0 135 -4,-1.7 -2,-0.2 -5,-0.2 -1,-0.2 0.955 119.7 25.5 -63.2 -53.4 3.1 -9.4 -7.4 32 32 A H H < S+ 0 0 94 -4,-2.4 2,-0.2 -5,-0.1 -2,-0.2 0.988 121.4 48.0 -77.0 -66.8 1.2 -11.1 -4.6 33 33 A Y S < S- 0 0 57 -4,-1.7 2,-0.2 -5,-0.2 -1,-0.1 -0.554 81.6-130.1 -80.7 142.3 -1.4 -8.5 -3.5 34 34 A K - 0 0 134 -2,-0.2 2,-0.3 -3,-0.0 -21,-0.1 -0.563 26.4-172.2 -88.3 155.2 -3.6 -6.8 -6.1 35 35 A F - 0 0 37 -2,-0.2 -26,-0.0 1,-0.1 -25,-0.0 -0.865 31.4-121.2-140.6 171.9 -4.1 -3.0 -6.1 36 36 A N S S- 0 0 121 -2,-0.3 -1,-0.1 1,-0.1 -30,-0.0 0.959 97.7 -22.0 -80.9 -59.4 -6.1 -0.4 -7.9 37 37 A N S S+ 0 0 112 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.311 93.8 136.3-152.9 57.6 -3.4 1.8 -9.5 38 38 A R + 0 0 35 1,-0.1 -3,-0.1 4,-0.1 3,-0.0 -0.696 13.4 157.3-105.4 160.5 -0.1 1.2 -7.5 39 39 A T - 0 0 94 -2,-0.2 -9,-0.2 0, 0.0 -1,-0.1 0.385 68.3 -66.2-142.7 -65.3 3.4 0.7 -8.9 40 40 A S S > S+ 0 0 38 -10,-0.0 4,-2.8 -15,-0.0 5,-0.2 0.173 123.3 56.5-163.4 -54.9 6.2 1.5 -6.4 41 41 A V H > S+ 0 0 115 1,-0.2 4,-3.0 2,-0.2 5,-0.2 0.905 109.4 50.1 -59.7 -44.4 6.2 5.2 -5.5 42 42 A M H > S+ 0 0 59 2,-0.2 4,-2.6 1,-0.2 5,-0.3 0.931 112.3 46.5 -60.7 -48.4 2.6 5.2 -4.4 43 43 A L H > S+ 0 0 0 2,-0.2 4,-2.3 1,-0.2 -2,-0.2 0.941 115.4 46.4 -59.5 -49.9 3.1 2.1 -2.1 44 44 A K H X S+ 0 0 103 -4,-2.8 4,-2.4 2,-0.2 5,-0.2 0.949 114.9 46.7 -56.7 -54.5 6.3 3.7 -0.7 45 45 A D H X S+ 0 0 65 -4,-3.0 4,-2.6 1,-0.2 -2,-0.2 0.960 114.2 44.9 -53.2 -62.0 4.6 7.1 -0.1 46 46 A R H X S+ 0 0 74 -4,-2.6 4,-2.7 1,-0.2 -1,-0.2 0.858 111.9 53.7 -55.3 -40.1 1.4 5.8 1.5 47 47 A W H X S+ 0 0 21 -4,-2.3 4,-2.8 -5,-0.3 -1,-0.2 0.950 110.5 45.5 -61.0 -49.3 3.4 3.4 3.7 48 48 A R H X S+ 0 0 157 -4,-2.4 4,-2.5 1,-0.2 -2,-0.2 0.902 112.2 52.6 -60.2 -41.6 5.6 6.2 5.1 49 49 A T H X S+ 0 0 59 -4,-2.6 4,-0.8 -5,-0.2 -1,-0.2 0.927 111.3 46.3 -58.7 -46.5 2.5 8.4 5.5 50 50 A M H >< S+ 0 0 80 -4,-2.7 3,-0.6 2,-0.2 -2,-0.2 0.917 110.4 53.8 -62.4 -44.9 0.8 5.6 7.5 51 51 A K H 3< S+ 0 0 108 -4,-2.8 -2,-0.2 1,-0.3 -1,-0.2 0.925 114.7 39.0 -56.6 -49.7 4.0 5.0 9.6 52 52 A K H 3< 0 0 144 -4,-2.5 -1,-0.3 1,-0.3 -2,-0.2 0.563 360.0 360.0 -78.3 -8.2 4.2 8.7 10.6 53 53 A L << 0 0 175 -4,-0.8 -1,-0.3 -3,-0.6 -2,-0.1 -0.540 360.0 360.0 63.9 360.0 0.4 8.8 11.0