==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SYNTHETIC PEPTIDE 03-MAY-98 1BCV . COMPND 2 MOLECULE: PEPTIDE CORRESPONDING TO THE MAJOR IMMUNOGEN . AUTHOR M.C.PETIT,N.BENKIRANE,G.GUICHARD,A.PHAN CHAN DU,M.T.CUNG, . 19 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2686.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 1 5.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 5.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 141 A G 0 0 133 0, 0.0 2,-0.8 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -60.9 3.5 -7.3 23.8 2 142 A S + 0 0 137 2,-0.1 0, 0.0 1,-0.0 0, 0.0 -0.471 360.0 108.3 -99.1 59.5 1.9 -8.1 20.4 3 143 A G - 0 0 50 -2,-0.8 2,-0.2 0, 0.0 -1,-0.0 0.486 68.5-107.3 -99.6-119.8 1.2 -4.4 19.5 4 144 A V - 0 0 149 2,-0.1 2,-0.1 0, 0.0 -2,-0.1 -0.569 18.4-128.8 175.1 116.5 3.0 -2.4 16.9 5 145 A R + 0 0 257 -2,-0.2 2,-0.2 2,-0.0 0, 0.0 -0.363 53.3 103.3 -72.0 152.1 5.5 0.5 17.2 6 146 A G - 0 0 74 -2,-0.1 2,-0.3 2,-0.0 -2,-0.1 -0.815 61.5 -88.6 153.7 168.5 4.9 3.7 15.3 7 147 A D - 0 0 135 -2,-0.2 -2,-0.0 1,-0.2 0, 0.0 -0.743 60.1 -71.1-106.2 154.8 3.7 7.3 15.6 8 148 A F S S+ 0 0 193 -2,-0.3 -1,-0.2 2,-0.0 2,-0.0 -0.049 93.4 78.1 -42.0 137.7 0.2 8.6 15.3 9 149 A G - 0 0 62 -3,-0.1 2,-0.3 2,-0.0 -2,-0.1 0.172 65.2-129.5 121.8 121.1 -1.1 8.5 11.7 10 150 A S + 0 0 131 -2,-0.0 2,-0.3 0, 0.0 -2,-0.0 -0.738 38.5 143.6 -98.5 145.9 -2.4 5.6 9.7 11 151 A L - 0 0 161 -2,-0.3 -2,-0.0 0, 0.0 0, 0.0 -0.966 34.6-123.1-167.0 170.8 -1.1 4.7 6.2 12 152 A A - 0 0 72 -2,-0.3 2,-0.0 1,-0.2 0, 0.0 -0.594 37.9 -80.4-117.7 179.7 -0.4 1.9 3.8 13 153 A P - 0 0 112 0, 0.0 2,-0.2 0, 0.0 -1,-0.2 -0.148 29.5-141.7 -75.0 174.2 2.7 0.7 1.8 14 154 A R + 0 0 244 -2,-0.0 2,-0.1 0, 0.0 4,-0.0 -0.700 32.7 157.4-143.5 85.7 3.9 2.1 -1.5 15 155 A V - 0 0 57 -2,-0.2 4,-0.0 1,-0.1 0, 0.0 -0.375 24.2-172.0 -99.7-179.2 5.2 -0.4 -3.9 16 156 A A S S+ 0 0 99 -2,-0.1 -1,-0.1 0, 0.0 0, 0.0 0.475 87.8 32.6-139.6 -46.3 5.5 -0.3 -7.7 17 157 A R S S+ 0 0 249 2,-0.0 2,-0.1 0, 0.0 -2,-0.0 0.745 111.0 74.2 -88.5 -28.4 6.5 -3.8 -8.8 18 158 A Q 0 0 150 1,-0.1 -3,-0.1 -4,-0.0 0, 0.0 -0.324 360.0 360.0 -81.6 167.1 4.6 -5.5 -6.1 19 159 A L 0 0 221 -2,-0.1 -1,-0.1 -4,-0.0 -2,-0.0 0.500 360.0 360.0 -63.4 360.0 0.8 -5.9 -6.0