==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 22-MAY-98 1BFW . COMPND 2 MOLECULE: VP1 PROTEIN; . AUTHOR M.C.PETIT,N.BENKIRANE,G.GUICHARD,A.PHAN CHAN DU,M.T.CUNG, . 18 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2323.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 1 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 158 A X 0 0 207 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 72.9 -1.9 -1.2 1.5 2 157 A X + 0 0 225 2,-0.0 0, 0.0 0, 0.0 0, 0.0 0.339 360.0 20.9 144.3 70.4 -3.3 -3.3 -1.3 3 156 A X S S- 0 0 79 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.434 94.6-110.7 154.9 -69.4 -2.3 -2.3 -4.8 4 155 A X + 0 0 89 2,-0.0 -2,-0.0 0, 0.0 0, 0.0 -0.903 43.7 160.3 140.0-166.5 0.9 -0.3 -4.8 5 154 A X - 0 0 216 -2,-0.3 3,-0.1 3,-0.0 0, 0.0 -0.387 29.6-163.1 149.1 -61.9 2.0 3.3 -5.5 6 153 A X + 0 0 74 1,-0.2 2,-0.8 2,-0.0 3,-0.3 -0.116 58.9 59.9 75.0-176.8 5.4 3.9 -3.8 7 152 A X S S- 0 0 97 1,-0.2 -1,-0.2 2,-0.0 -2,-0.0 -0.458 92.4-113.9 62.6-102.6 6.9 7.2 -3.1 8 151 A X S S+ 0 0 111 -2,-0.8 2,-0.3 -3,-0.1 -1,-0.2 0.450 79.4 21.3 132.4 77.8 4.3 8.8 -0.9 9 150 A X S S- 0 0 118 -3,-0.3 -2,-0.0 1,-0.1 -3,-0.0 -0.897 91.1 -87.4 151.2-115.9 2.5 11.8 -2.2 10 149 A G - 0 0 60 -2,-0.3 2,-0.3 1,-0.1 -1,-0.1 0.199 54.1-105.2-154.9 -69.9 2.1 12.8 -5.8 11 148 A X - 0 0 134 -3,-0.1 -1,-0.1 1,-0.0 0, 0.0 -0.982 25.6-171.5 161.2-152.9 4.8 14.9 -7.4 12 147 A X - 0 0 165 -2,-0.3 2,-0.3 1,-0.0 -1,-0.0 -0.328 32.9-129.3 165.5 -69.3 5.5 18.5 -8.5 13 146 A G - 0 0 49 2,-0.0 2,-0.4 0, 0.0 -1,-0.0 -0.645 31.4-123.1 130.7 -74.9 8.7 18.9 -10.3 14 145 A X - 0 0 228 -2,-0.3 2,-0.3 0, 0.0 0, 0.0 -0.996 19.6-154.7 139.3-130.7 10.7 21.7 -8.8 15 144 A X - 0 0 146 -2,-0.4 2,-0.1 1,-0.0 -2,-0.0 -0.888 18.9-116.5 158.5-122.2 12.1 24.8 -10.4 16 143 A G - 0 0 66 -2,-0.3 2,-0.2 1,-0.1 -1,-0.0 -0.340 19.5-131.1-170.9-100.5 15.0 27.0 -9.4 17 142 A X 0 0 125 1,-0.4 -1,-0.1 -2,-0.1 0, 0.0 -0.660 360.0 360.0 164.0 -99.9 15.0 30.6 -8.3 18 141 A G 0 0 134 -2,-0.2 -1,-0.4 0, 0.0 0, 0.0 0.541 360.0 360.0-107.6 360.0 17.3 33.3 -9.8