==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER AMYLOID 07-DEC-04 2BFI . COMPND 2 MOLECULE: SYNTHETIC PEPTIDE; . SOURCE 2 SYNTHETIC: YES . AUTHOR O.SUMNER MAKIN,E.ATKINS,P.SIKORSKI,J.JOHANSSON,L.C.SERPELL . 12 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2128.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A K 0 0 236 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 173.4 2.3 8.7 3.8 2 2 A F + 0 0 214 2,-0.0 2,-0.4 0, 0.0 0, 0.0 -0.996 360.0 178.9-137.0 135.0 1.6 6.8 7.1 3 3 A F - 0 0 187 -2,-0.4 2,-0.4 2,-0.0 0, 0.0 -0.996 3.6-179.2-137.0 135.0 2.3 8.2 10.6 4 4 A E - 0 0 192 -2,-0.4 2,-0.4 2,-0.0 -2,-0.0 -0.996 0.0-179.2-137.0 135.0 1.7 6.8 14.0 5 5 A A - 0 0 106 -2,-0.4 2,-0.4 2,-0.0 -2,-0.0 -0.996 0.0-179.2-137.0 135.0 2.3 8.2 17.5 6 6 A A - 0 0 95 -2,-0.4 2,-0.4 2,-0.0 -2,-0.0 -0.997 0.0-179.2-137.0 135.0 1.7 6.7 20.9 7 7 A A - 0 0 86 -2,-0.4 2,-0.4 2,-0.0 -2,-0.0 -0.997 0.0-179.2-137.0 135.0 2.3 8.2 24.3 8 8 A K - 0 0 181 -2,-0.4 2,-0.4 2,-0.0 -2,-0.0 -0.997 0.0-179.2-137.0 135.0 1.7 6.6 27.8 9 9 A K - 0 0 180 -2,-0.4 2,-0.4 2,-0.0 -2,-0.0 -0.996 0.0-179.2-137.0 135.0 2.2 8.1 31.2 10 10 A F - 0 0 190 -2,-0.4 2,-0.4 0, 0.0 -2,-0.0 -0.996 0.0-179.2-137.0 135.1 1.8 6.6 34.6 11 11 A F 0 0 202 -2,-0.4 -2,-0.0 1,-0.1 0, 0.0 -0.996 360.0 360.0-137.0 135.0 2.2 8.1 38.1 12 12 A E 0 0 259 -2,-0.4 -1,-0.1 0, 0.0 0, 0.0 0.937 360.0 360.0 -83.8 360.0 1.8 6.5 41.5