==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBONUCLEASE 03-DEC-96 2BIR . COMPND 2 MOLECULE: RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR J.DOUMEN,J.STEYAERT,S.LOVERIX . 104 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5678.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 52.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 25 24.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 151 0, 0.0 2,-0.3 0, 0.0 9,-0.0 0.000 360.0 360.0 360.0 139.3 -16.9 -6.2 -4.6 2 2 A a - 0 0 48 1,-0.1 10,-0.2 10,-0.1 3,-0.2 -0.708 360.0-155.3 -86.4 135.3 -14.0 -4.4 -3.1 3 3 A D S S+ 0 0 93 8,-2.0 2,-0.3 1,-0.3 9,-0.2 0.654 92.2 20.5 -80.3 -27.1 -10.5 -5.9 -3.7 4 4 A Y E S-A 11 0A 63 7,-1.7 7,-2.2 100,-0.0 2,-0.5 -0.943 72.3-161.4-145.1 128.1 -9.4 -4.1 -0.4 5 5 A T E -A 10 0A 44 -2,-0.3 99,-1.7 5,-0.2 2,-0.7 -0.974 5.3-174.8-115.7 115.5 -11.7 -2.9 2.4 6 6 A b E > -A 9 0A 1 3,-1.7 3,-1.5 -2,-0.5 2,-0.8 -0.786 66.2 -65.8-115.9 83.0 -10.3 -0.2 4.8 7 7 A G T 3 S- 0 0 51 -2,-0.7 97,-0.0 1,-0.3 84,-0.0 -0.687 122.1 -12.2 74.3-104.2 -13.0 0.3 7.4 8 8 A S T 3 S+ 0 0 123 -2,-0.8 -1,-0.3 -3,-0.1 2,-0.0 0.749 116.2 104.4 -91.3 -35.9 -15.8 1.8 5.3 9 9 A N E < -A 6 0A 48 -3,-1.5 -3,-1.7 1,-0.1 2,-0.5 -0.220 57.1-150.8 -61.2 131.7 -13.6 2.5 2.2 10 10 A a E -A 5 0A 68 -5,-0.2 2,-0.4 53,-0.2 -5,-0.2 -0.957 15.2-177.8-111.5 125.7 -13.7 0.4 -1.0 11 11 A Y E -A 4 0A 4 -7,-2.2 -8,-2.0 -2,-0.5 -7,-1.7 -0.985 11.4-158.2-129.7 132.9 -10.7 -0.1 -3.2 12 12 A S > - 0 0 37 -2,-0.4 4,-1.0 -10,-0.2 -10,-0.1 -0.388 39.8-100.2 -92.0 175.3 -10.3 -1.9 -6.5 13 13 A S H > S+ 0 0 60 2,-0.2 4,-1.8 1,-0.2 5,-0.1 0.850 122.9 55.0 -65.5 -34.3 -6.9 -3.1 -7.9 14 14 A S H > S+ 0 0 73 2,-0.2 4,-1.7 1,-0.2 -1,-0.2 0.810 103.3 55.3 -70.2 -33.5 -6.7 -0.1 -10.3 15 15 A D H > S+ 0 0 49 2,-0.2 4,-1.5 1,-0.2 -1,-0.2 0.844 111.1 45.2 -63.5 -37.8 -7.0 2.3 -7.3 16 16 A V H X S+ 0 0 3 -4,-1.0 4,-2.1 2,-0.2 -2,-0.2 0.823 113.3 49.7 -76.7 -37.7 -4.0 0.6 -5.7 17 17 A S H X S+ 0 0 73 -4,-1.8 4,-1.3 2,-0.2 -2,-0.2 0.753 111.3 47.7 -74.5 -33.0 -2.0 0.6 -9.0 18 18 A T H X S+ 0 0 85 -4,-1.7 4,-1.0 2,-0.2 -2,-0.2 0.888 114.8 46.1 -76.8 -42.2 -2.6 4.4 -9.7 19 19 A A H >X S+ 0 0 5 -4,-1.5 4,-1.5 1,-0.2 3,-0.5 0.938 112.8 50.8 -66.4 -44.0 -1.7 5.4 -6.1 20 20 A Q H 3X S+ 0 0 21 -4,-2.1 4,-1.5 1,-0.2 -2,-0.2 0.764 109.0 50.0 -61.3 -41.2 1.5 3.1 -6.1 21 21 A A H 3X S+ 0 0 58 -4,-1.3 4,-1.3 2,-0.2 -1,-0.2 0.707 110.9 49.9 -70.8 -29.9 2.9 4.5 -9.5 22 22 A A H S+ 0 0 30 -4,-1.2 5,-2.0 1,-0.2 -1,-0.2 0.819 110.7 54.6 -69.2 -31.9 8.2 10.7 -6.3 27 27 A H H ><5S+ 0 0 42 -4,-1.0 3,-0.6 1,-0.2 -2,-0.2 0.861 109.5 46.0 -69.0 -46.3 10.5 8.2 -4.4 28 28 A E H 3<5S+ 0 0 103 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.681 112.9 48.5 -71.4 -26.9 12.9 7.8 -7.3 29 29 A D T 3<5S- 0 0 87 -4,-1.1 -1,-0.2 -5,-0.2 -2,-0.2 0.309 112.2-121.4 -92.8 -1.6 13.2 11.6 -8.0 30 30 A G T < 5 + 0 0 67 -3,-0.6 -3,-0.2 1,-0.2 2,-0.2 0.603 66.7 137.2 68.6 16.4 13.7 12.2 -4.2 31 31 A E < - 0 0 120 -5,-2.0 2,-0.3 -6,-0.2 -1,-0.2 -0.529 34.6-165.5 -94.7 152.1 10.7 14.4 -4.0 32 32 A T - 0 0 77 -2,-0.2 2,-0.3 -3,-0.1 8,-0.0 -0.881 4.6-150.7-129.7 158.2 8.0 14.5 -1.3 33 33 A V B > +B 38 0B 40 5,-1.5 5,-2.1 -2,-0.3 37,-0.2 -0.984 50.7 14.8-132.4 153.3 4.4 16.1 -1.1 34 34 A G T > 5S- 0 0 35 35,-0.4 3,-0.7 -2,-0.3 38,-0.1 -0.025 92.8 -65.8 78.4-179.5 2.2 17.5 1.8 35 35 A S T 3 5S+ 0 0 106 36,-0.3 -1,-0.2 1,-0.2 37,-0.1 0.678 128.8 51.6 -78.6 -24.5 3.0 18.5 5.4 36 36 A N T 3 5S- 0 0 97 -3,-0.2 -1,-0.2 4,-0.0 -2,-0.1 0.256 114.3-111.0 -95.5 6.8 3.9 14.9 6.7 37 37 A S T < 5 - 0 0 59 -3,-0.7 -3,-0.2 1,-0.2 -2,-0.1 0.975 38.8-128.6 55.8 69.9 6.5 14.3 3.8 38 38 A Y B + 0 0 46 1,-0.1 3,-0.7 2,-0.0 -2,-0.0 0.906 40.6 163.4 59.0 57.1 6.6 -2.0 10.3 45 45 A Y T 3 S+ 0 0 200 1,-0.2 -1,-0.1 2,-0.1 54,-0.0 0.652 74.4 57.5 -65.8 -28.7 6.2 -1.7 14.2 46 46 A E T 3 S- 0 0 62 55,-0.0 -1,-0.2 2,-0.0 -2,-0.0 0.586 107.7-126.2 -76.3 -29.2 3.1 -3.9 14.1 47 47 A G < - 0 0 62 -3,-0.7 2,-0.2 1,-0.1 -2,-0.1 0.986 34.3-170.1 72.7 64.4 4.9 -6.9 12.4 48 48 A F - 0 0 41 1,-0.1 2,-1.5 53,-0.0 -1,-0.1 -0.544 30.9-114.6 -84.0 149.4 2.9 -7.7 9.3 49 49 A A + 0 0 99 -2,-0.2 2,-0.4 2,-0.0 -1,-0.1 -0.560 45.4 170.7 -87.6 69.6 3.3 -10.7 7.0 50 50 A F - 0 0 23 -2,-1.5 38,-0.1 1,-0.1 37,-0.1 -0.719 26.9-152.6 -81.7 124.0 4.5 -8.9 3.8 51 51 A S S S+ 0 0 126 -2,-0.4 2,-0.3 36,-0.4 -1,-0.1 0.262 73.5 73.5 -84.2 5.5 5.7 -11.4 1.2 52 52 A V S S- 0 0 20 1,-0.1 -2,-0.1 35,-0.1 2,-0.0 -0.774 89.5 -88.6-112.2 166.7 8.2 -8.9 -0.4 53 53 A S - 0 0 69 -2,-0.3 29,-0.2 1,-0.1 30,-0.2 -0.230 49.1 -72.4 -83.2 161.6 11.5 -7.5 1.0 54 54 A S S S+ 0 0 85 27,-0.1 -1,-0.1 2,-0.1 2,-0.1 -0.492 87.2 69.5 -85.5 148.6 12.5 -4.6 3.3 55 55 A P - 0 0 44 0, 0.0 27,-0.4 0, 0.0 2,-0.3 0.566 66.4-165.3 -74.9 149.4 12.7 -1.3 3.1 56 56 A Y E -C 42 0C 26 -14,-0.7 -14,-3.0 25,-0.2 2,-0.4 -0.858 7.9-161.1-110.4 139.2 9.0 -0.4 2.9 57 57 A Y E -CD 41 80C 36 23,-2.2 23,-1.8 -2,-0.3 2,-0.3 -0.998 7.5-146.4-126.7 129.3 7.5 3.0 2.0 58 58 A E E +CD 40 79C 19 -18,-2.2 -18,-1.1 -2,-0.4 21,-0.2 -0.776 18.0 172.6-100.5 138.2 3.9 4.3 2.7 59 59 A W E - D 0 78C 4 19,-1.9 19,-2.6 -2,-0.3 -36,-0.1 -0.991 35.9-100.8-141.1 137.6 1.8 6.7 0.5 60 60 A P E - D 0 77C 2 0, 0.0 2,-0.4 0, 0.0 8,-0.4 -0.123 23.2-160.9 -67.4 144.0 -2.0 7.8 0.9 61 61 A I - 0 0 7 15,-1.4 15,-0.4 12,-0.3 2,-0.3 -0.991 19.2-145.0-126.8 116.7 -4.8 6.2 -1.1 62 62 A L > - 0 0 38 4,-0.7 3,-1.2 -2,-0.4 12,-0.1 -0.712 12.5-136.4 -94.5 138.6 -7.9 8.4 -1.1 63 63 A S T 3 S+ 0 0 80 -2,-0.3 -53,-0.2 1,-0.2 -1,-0.1 0.694 100.8 65.3 -61.0 -30.7 -11.6 7.2 -1.0 64 64 A S T 3 S- 0 0 89 2,-0.1 -1,-0.2 1,-0.1 3,-0.1 0.633 113.7-113.7 -69.0 -19.2 -12.7 9.8 -3.7 65 65 A G S < S+ 0 0 46 -3,-1.2 2,-0.1 1,-0.4 -2,-0.1 0.232 75.6 126.2 97.7 -6.8 -10.5 8.0 -6.3 66 66 A D - 0 0 115 1,-0.1 -4,-0.7 -5,-0.0 -1,-0.4 -0.443 62.7-111.9 -81.3 154.3 -8.0 11.0 -6.7 67 67 A V - 0 0 69 -2,-0.1 2,-0.3 -6,-0.1 -6,-0.1 -0.554 37.1-103.3 -83.2 148.1 -4.2 10.8 -6.3 68 68 A Y + 0 0 7 -8,-0.4 3,-0.1 -2,-0.2 -1,-0.1 -0.622 49.8 152.2 -76.3 137.7 -2.5 12.6 -3.3 69 69 A S - 0 0 98 1,-0.6 -35,-0.4 -2,-0.3 2,-0.2 0.400 68.4 -38.9-145.5 -3.5 -0.7 15.9 -4.0 70 70 A G S S+ 0 0 38 -37,-0.2 -1,-0.6 2,-0.1 2,-0.2 -0.809 97.2 49.3 148.2 162.8 -0.9 17.8 -0.7 71 71 A G S S+ 0 0 51 -2,-0.2 -36,-0.3 -3,-0.1 -3,-0.0 -0.538 94.7 19.7 89.1-146.3 -3.4 18.4 2.2 72 72 A S - 0 0 104 -2,-0.2 -2,-0.1 1,-0.1 -38,-0.0 -0.506 53.6-168.1 -67.7 120.7 -5.4 15.7 4.1 73 73 A P - 0 0 25 0, 0.0 -12,-0.3 0, 0.0 3,-0.2 0.773 24.7-152.1 -75.4 -33.2 -4.0 12.1 3.8 74 74 A G - 0 0 47 1,-0.2 -12,-0.1 -14,-0.1 17,-0.0 -0.465 37.0 -66.3 86.2-157.7 -6.9 10.3 5.3 75 75 A A S S+ 0 0 25 -2,-0.2 17,-1.3 -14,-0.1 2,-0.2 0.758 102.5 86.1 -99.9 -23.8 -6.5 6.9 7.1 76 76 A D E - E 0 91C 3 -15,-0.4 -15,-1.4 15,-0.2 2,-0.3 -0.578 47.6-179.6 -95.9 137.6 -5.4 4.6 4.4 77 77 A R E -DE 60 90C 10 13,-2.6 13,-2.8 -2,-0.2 2,-0.3 -0.981 20.6-143.2-134.5 138.4 -1.9 3.9 3.0 78 78 A V E -DE 59 89C 0 -19,-2.6 -19,-1.9 -2,-0.3 2,-0.5 -0.814 22.2-148.1 -96.1 136.5 -0.5 1.6 0.1 79 79 A V E +DE 58 88C 0 9,-2.5 8,-2.2 -2,-0.3 9,-1.2 -0.957 23.7 167.0-113.4 125.6 2.9 0.0 1.1 80 80 A F E -DE 57 86C 0 -23,-1.8 -23,-2.2 -2,-0.5 6,-0.2 -0.763 21.4-136.3-122.0 175.4 5.4 -0.7 -1.7 81 81 A N - 0 0 1 4,-1.0 3,-0.2 -2,-0.3 -25,-0.2 -0.339 38.9 -80.6-117.5-154.5 9.1 -1.5 -1.6 82 82 A E S S+ 0 0 76 -27,-0.4 -26,-0.1 -29,-0.2 -28,-0.1 0.706 127.8 52.9 -85.3 -17.3 12.3 -0.5 -3.5 83 83 A N S S- 0 0 110 -30,-0.2 -1,-0.2 2,-0.1 -3,-0.0 0.592 117.6-109.5 -90.1 -16.3 11.5 -2.9 -6.4 84 84 A N S S+ 0 0 66 1,-0.3 2,-0.4 -3,-0.2 -2,-0.1 0.952 71.8 139.9 72.4 61.3 7.9 -1.4 -6.9 85 85 A Q - 0 0 79 -65,-0.0 -4,-1.0 0, 0.0 -1,-0.3 -0.981 56.2-110.8-129.0 137.7 6.1 -4.5 -5.6 86 86 A L E +E 80 0C 46 -2,-0.4 -6,-0.2 -6,-0.2 -35,-0.1 -0.561 29.8 177.9 -80.7 131.2 3.0 -4.2 -3.4 87 87 A A E - 0 0 18 -8,-2.2 -36,-0.4 1,-0.4 2,-0.3 0.808 59.7 -68.3 -93.5 -45.0 3.4 -5.2 0.2 88 88 A G E -E 79 0C 7 -9,-1.2 -9,-2.5 -38,-0.1 2,-0.4 -0.921 37.8 -95.3 163.5 170.0 -0.2 -4.4 1.3 89 89 A V E -E 78 0C 2 -2,-0.3 14,-2.5 14,-0.3 2,-0.3 -0.951 45.2-177.2-113.2 120.6 -2.8 -1.7 1.9 90 90 A I E -EF 77 102C 6 -13,-2.8 -13,-2.6 -2,-0.4 2,-0.3 -0.856 7.8-159.7-118.5 163.7 -3.0 -0.7 5.6 91 91 A T E -EF 76 101C 3 10,-2.7 10,-2.2 -2,-0.3 -15,-0.2 -0.993 29.5-145.7-150.4 148.4 -5.3 1.7 7.6 92 92 A H S > S+ 0 0 41 -17,-1.3 3,-1.6 -2,-0.3 2,-0.4 0.503 73.3 112.1 -81.9 -13.3 -5.4 3.8 10.9 93 93 A T T 3 S+ 0 0 62 1,-0.3 -86,-0.1 8,-0.1 3,-0.1 -0.526 89.2 6.2 -69.0 115.2 -9.3 3.1 11.0 94 94 A G T 3 S+ 0 0 80 -2,-0.4 2,-0.4 1,-0.3 -1,-0.3 0.648 108.4 109.3 80.7 18.8 -10.1 0.7 13.9 95 95 A A S < S- 0 0 21 -3,-1.6 2,-0.5 4,-0.2 -1,-0.3 -0.955 79.7 -99.8-122.2 141.7 -6.6 0.8 15.2 96 96 A S S > S- 0 0 104 -2,-0.4 3,-0.8 4,-0.1 2,-0.2 -0.531 74.7 -48.2 -71.9 108.0 -5.7 2.7 18.5 97 97 A G T 3 S- 0 0 63 -2,-0.5 -2,-0.2 1,-0.2 0, 0.0 -0.475 125.4 -5.4 79.8-122.6 -4.2 6.1 17.9 98 98 A N T 3 S+ 0 0 150 -2,-0.2 -1,-0.2 2,-0.0 -2,-0.1 0.170 108.4 113.9 -95.8 22.8 -1.4 6.3 15.3 99 99 A N < - 0 0 75 -3,-0.8 2,-0.3 -7,-0.2 -4,-0.2 -0.309 56.0-128.4 -90.3 168.0 -1.3 2.5 14.9 100 100 A F - 0 0 24 -2,-0.1 2,-0.3 -6,-0.1 -8,-0.2 -0.847 16.7-173.1-126.9 152.1 -2.2 0.3 11.8 101 101 A V E -F 91 0C 58 -10,-2.2 -10,-2.7 -2,-0.3 2,-0.2 -0.946 37.8-102.1-133.8 148.6 -4.4 -2.7 10.8 102 102 A E E -F 90 0C 88 -2,-0.3 2,-0.4 -12,-0.2 -12,-0.2 -0.486 34.9-111.8 -77.2 140.6 -4.4 -4.4 7.4 103 103 A b 0 0 15 -14,-2.5 -14,-0.3 -2,-0.2 -97,-0.2 -0.653 360.0 360.0 -73.7 124.8 -7.2 -3.7 4.8 104 104 A T 0 0 141 -99,-1.7 -98,-0.1 -2,-0.4 -1,-0.1 0.603 360.0 360.0 -74.5 360.0 -9.5 -6.8 4.3