==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ENDONUCLEASE 27-JUN-97 3BIR . COMPND 2 MOLECULE: RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR J.DOUMEN,J.STEYAERT . 104 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5560.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 59 56.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 26 25.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 5.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 14.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 153 0, 0.0 2,-0.3 0, 0.0 9,-0.0 0.000 360.0 360.0 360.0 146.7 4.9 5.6 29.6 2 2 A a - 0 0 48 1,-0.1 10,-0.2 10,-0.1 3,-0.2 -0.702 360.0-158.2 -88.2 140.1 6.5 7.4 26.6 3 3 A D S S+ 0 0 85 8,-2.1 2,-0.4 1,-0.3 9,-0.2 0.835 90.8 21.1 -80.5 -37.9 6.0 6.1 23.1 4 4 A Y E -A 11 0A 64 7,-2.3 7,-2.7 100,-0.0 2,-0.6 -1.000 68.9-162.4-133.7 127.9 9.2 7.9 22.0 5 5 A T E -A 10 0A 46 -2,-0.4 99,-1.5 5,-0.2 2,-0.8 -0.964 4.8-174.1-116.3 111.6 12.0 9.1 24.4 6 6 A b E > -A 9 0A 0 3,-2.4 3,-2.5 -2,-0.6 2,-0.6 -0.857 65.3 -68.8-108.3 82.8 14.3 11.7 22.8 7 7 A G T 3 S- 0 0 43 -2,-0.8 97,-0.1 1,-0.3 84,-0.0 -0.538 120.2 -12.9 70.4-103.8 17.0 12.0 25.4 8 8 A S T 3 S+ 0 0 123 -2,-0.6 2,-0.3 -3,-0.1 -1,-0.3 0.519 117.6 101.4-100.2 -16.6 15.0 13.7 28.3 9 9 A N E < -A 6 0A 51 -3,-2.5 -3,-2.4 1,-0.0 2,-0.5 -0.599 59.4-149.8 -82.0 133.8 12.0 14.6 26.1 10 10 A a E -A 5 0A 76 -2,-0.3 2,-0.4 -5,-0.2 -5,-0.2 -0.922 15.5-177.9-110.5 123.4 8.8 12.4 26.2 11 11 A Y E -A 4 0A 5 -7,-2.7 -7,-2.3 -2,-0.5 -8,-2.1 -0.947 13.0-155.6-127.1 142.1 6.4 11.9 23.3 12 12 A S > - 0 0 39 -2,-0.4 4,-1.6 -9,-0.2 3,-0.2 -0.582 38.8-103.0 -98.4 170.6 3.2 10.1 22.8 13 13 A S H > S+ 0 0 61 1,-0.2 4,-2.3 -2,-0.2 5,-0.1 0.891 123.1 55.5 -62.8 -33.8 1.8 8.8 19.4 14 14 A S H > S+ 0 0 75 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.838 104.1 52.9 -69.4 -33.5 -0.7 11.8 19.3 15 15 A D H > S+ 0 0 56 -3,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.908 111.8 47.1 -66.5 -40.2 2.3 14.2 19.7 16 16 A V H X S+ 0 0 4 -4,-1.6 4,-2.6 1,-0.2 -2,-0.2 0.898 111.7 49.0 -69.9 -42.4 3.9 12.5 16.7 17 17 A S H X S+ 0 0 70 -4,-2.3 4,-2.2 2,-0.2 -1,-0.2 0.844 112.4 48.3 -66.2 -38.7 0.8 12.5 14.5 18 18 A T H X S+ 0 0 83 -4,-1.9 4,-1.8 2,-0.2 -2,-0.2 0.927 114.8 44.3 -69.8 -48.1 0.1 16.3 15.2 19 19 A A H X S+ 0 0 7 -4,-2.1 4,-2.2 1,-0.2 -2,-0.2 0.939 115.0 50.4 -62.7 -43.6 3.7 17.3 14.4 20 20 A Q H X S+ 0 0 24 -4,-2.6 4,-2.5 2,-0.2 -2,-0.2 0.840 108.8 50.5 -63.9 -40.3 3.7 15.0 11.2 21 21 A A H X S+ 0 0 55 -4,-2.2 4,-2.0 2,-0.2 -1,-0.2 0.920 112.1 48.1 -65.8 -38.3 0.3 16.5 9.9 22 22 A A H X S+ 0 0 25 -4,-1.8 4,-1.5 1,-0.2 -2,-0.2 0.888 113.6 47.7 -69.5 -39.6 1.7 20.0 10.3 23 23 A G H X S+ 0 0 0 -4,-2.2 4,-1.9 1,-0.2 -2,-0.2 0.861 111.6 48.4 -69.9 -44.5 4.9 19.0 8.5 24 24 A Y H X S+ 0 0 46 -4,-2.5 4,-2.6 2,-0.2 -2,-0.2 0.848 107.0 55.7 -65.8 -40.4 3.2 17.3 5.6 25 25 A K H X S+ 0 0 111 -4,-2.0 4,-1.6 2,-0.2 -2,-0.2 0.902 110.6 45.6 -59.2 -42.8 0.8 20.1 5.0 26 26 A L H X>S+ 0 0 31 -4,-1.5 5,-2.5 2,-0.2 4,-0.7 0.903 112.4 51.6 -70.1 -33.1 3.8 22.6 4.6 27 27 A H H ><5S+ 0 0 43 -4,-1.9 3,-0.9 1,-0.2 -2,-0.2 0.915 110.1 48.3 -66.4 -47.1 5.6 20.0 2.4 28 28 A E H 3<5S+ 0 0 119 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.800 114.5 47.6 -60.1 -36.5 2.4 19.7 0.1 29 29 A D H 3<5S- 0 0 74 -4,-1.6 -1,-0.2 -5,-0.2 -2,-0.2 0.536 109.7-121.2 -86.0 -9.8 2.2 23.5 -0.1 30 30 A G T <<5 + 0 0 71 -3,-0.9 2,-0.3 -4,-0.7 -3,-0.2 0.886 67.6 137.5 66.8 33.8 5.9 24.1 -0.9 31 31 A E < - 0 0 106 -5,-2.5 2,-0.3 -6,-0.1 -1,-0.3 -0.880 35.1-165.9-114.1 143.7 6.2 26.3 2.2 32 32 A T - 0 0 80 -2,-0.3 2,-0.3 -3,-0.1 5,-0.0 -0.974 4.2-158.4-129.3 148.4 8.9 26.4 4.8 33 33 A V B > +B 38 0B 41 5,-2.5 5,-1.9 -2,-0.3 37,-0.2 -0.974 51.9 18.1-126.7 144.8 9.3 27.9 8.4 34 34 A G T > 5S- 0 0 30 -2,-0.3 3,-1.1 35,-0.3 38,-0.1 0.007 92.1 -67.3 89.3 172.4 12.4 28.9 10.4 35 35 A S T 3 5S+ 0 0 117 1,-0.2 -1,-0.1 36,-0.2 37,-0.1 0.732 129.1 50.6 -70.5 -25.9 16.1 29.5 9.6 36 36 A N T 3 5S- 0 0 93 -3,-0.2 -1,-0.2 4,-0.0 -2,-0.1 0.259 115.0-112.2-101.3 17.7 16.9 26.0 8.6 37 37 A S T < 5 - 0 0 57 -3,-1.1 -3,-0.2 1,-0.2 -2,-0.1 0.938 40.7-129.3 49.9 61.2 13.9 25.8 6.2 38 38 A Y B + 0 0 34 3,-0.0 3,-0.6 2,-0.0 -2,-0.0 0.921 44.6 165.3 60.2 53.3 19.7 9.6 5.8 45 45 A Y T 3 S+ 0 0 198 1,-0.2 54,-0.0 2,-0.1 -1,-0.0 0.849 76.5 56.7 -61.4 -32.5 23.6 10.0 6.4 46 46 A E T 3 S- 0 0 57 1,-0.0 -1,-0.2 55,-0.0 -2,-0.0 0.711 107.2-131.8 -71.5 -27.7 23.3 7.9 9.5 47 47 A G < - 0 0 50 -3,-0.6 -2,-0.1 1,-0.1 2,-0.1 0.931 33.1-174.4 70.4 48.2 21.8 5.0 7.5 48 48 A F - 0 0 32 1,-0.1 2,-1.3 53,-0.0 -1,-0.1 -0.399 31.5-114.5 -66.5 149.6 18.8 4.2 9.7 49 49 A D - 0 0 161 -2,-0.1 2,-0.4 2,-0.0 -1,-0.1 -0.691 40.9-179.5 -96.4 81.5 16.6 1.2 8.8 50 50 A F - 0 0 20 -2,-1.3 38,-0.1 1,-0.1 37,-0.1 -0.714 24.3-148.5 -81.5 128.9 13.4 2.9 7.9 51 51 A S S S+ 0 0 126 -2,-0.4 2,-0.3 36,-0.4 -1,-0.1 0.633 78.7 68.8 -70.7 -21.5 10.5 0.5 6.9 52 52 A V S S- 0 0 21 1,-0.1 -2,-0.1 35,-0.1 35,-0.0 -0.711 91.2 -91.3-101.5 155.3 8.9 3.0 4.5 53 53 A S - 0 0 70 -2,-0.3 29,-0.2 1,-0.1 30,-0.2 -0.132 46.9 -71.6 -74.9 157.5 10.4 4.3 1.2 54 54 A S S S+ 0 0 83 27,-0.1 -1,-0.1 -4,-0.1 2,-0.1 -0.287 85.9 72.7 -70.5 151.0 12.6 7.2 0.2 55 55 A P - 0 0 44 0, 0.0 27,-0.7 0, 0.0 2,-0.3 0.645 67.3-168.7 -77.1 147.0 12.4 10.5 -0.1 56 56 A Y E -CD 42 81C 24 -14,-0.6 -14,-2.6 25,-0.2 2,-0.4 -0.824 10.8-158.9-109.1 148.4 12.4 11.5 3.5 57 57 A Y E -CD 41 80C 35 23,-2.4 23,-2.0 -2,-0.3 2,-0.3 -0.999 8.7-143.1-130.8 133.1 11.7 14.8 5.2 58 58 A E E +CD 40 79C 12 -18,-2.5 -18,-1.3 -2,-0.4 21,-0.2 -0.782 21.6 172.9 -97.5 137.6 12.7 16.1 8.7 59 59 A W E - D 0 78C 3 19,-2.1 19,-3.1 -2,-0.3 -36,-0.1 -0.984 33.8-105.1-140.6 139.7 10.4 18.3 10.8 60 60 A P E - D 0 77C 1 0, 0.0 8,-0.5 0, 0.0 2,-0.4 -0.283 23.5-162.7 -73.5 135.3 10.7 19.5 14.5 61 61 A I - 0 0 7 15,-1.4 2,-0.4 12,-0.2 15,-0.4 -0.983 20.2-141.0-112.2 130.0 8.6 18.0 17.2 62 62 A L > - 0 0 36 4,-0.6 3,-1.8 -2,-0.4 12,-0.1 -0.861 16.9-142.5-106.0 139.1 8.5 20.2 20.3 63 63 A S T 3 S+ 0 0 85 -2,-0.4 -53,-0.1 1,-0.3 -1,-0.1 0.686 100.4 68.7 -64.4 -19.8 8.6 19.3 24.0 64 64 A S T 3 S- 0 0 78 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.644 109.4-120.5 -72.2 -21.0 6.2 22.1 24.7 65 65 A G S < S+ 0 0 51 -3,-1.8 2,-0.2 1,-0.4 -2,-0.1 0.257 75.7 124.1 89.9 -6.4 3.4 20.2 22.9 66 66 A D - 0 0 116 1,-0.1 -4,-0.6 -5,-0.0 -1,-0.4 -0.499 68.3-110.4 -82.0 152.8 3.1 23.2 20.4 67 67 A V - 0 0 64 -2,-0.2 2,-0.2 -3,-0.1 -6,-0.1 -0.638 42.4 -97.7 -82.8 141.7 3.5 22.8 16.7 68 68 A Y + 0 0 7 -8,-0.5 3,-0.1 -2,-0.3 -1,-0.1 -0.433 50.9 159.0 -66.7 129.6 6.7 24.3 15.1 69 69 A S - 0 0 102 1,-0.5 -35,-0.3 -2,-0.2 2,-0.2 0.328 61.2 -58.0-133.1 1.1 6.1 27.8 13.6 70 70 A G S S+ 0 0 31 -37,-0.2 -1,-0.5 2,-0.1 2,-0.1 -0.714 93.0 62.1 133.8 170.2 9.6 29.4 13.5 71 71 A G S S+ 0 0 56 -2,-0.2 -36,-0.2 -3,-0.1 -1,-0.1 -0.435 96.9 15.7 81.2-149.2 12.4 30.2 15.9 72 72 A S - 0 0 106 1,-0.1 -2,-0.1 -2,-0.1 -38,-0.0 -0.311 56.4-168.2 -66.6 115.8 14.3 27.6 17.9 73 73 A P - 0 0 26 0, 0.0 -12,-0.2 0, 0.0 3,-0.2 0.632 23.9-149.7 -74.5 -21.0 13.7 23.9 16.6 74 74 A G - 0 0 49 1,-0.2 -12,-0.1 -14,-0.1 0, 0.0 -0.304 38.3 -68.7 78.2-155.7 15.3 22.1 19.5 75 75 A A S S+ 0 0 25 -69,-0.1 17,-1.7 -14,-0.1 2,-0.2 0.664 99.4 95.8-110.0 -8.8 16.9 18.7 19.0 76 76 A D E - E 0 91C 3 -15,-0.4 -15,-1.4 -3,-0.2 2,-0.3 -0.553 46.3-179.6 -99.6 136.9 13.9 16.5 18.1 77 77 A R E -DE 60 90C 7 13,-3.1 13,-2.7 -17,-0.2 2,-0.4 -0.992 23.6-145.8-136.9 141.0 12.6 15.5 14.7 78 78 A V E -DE 59 89C 0 -19,-3.1 -19,-2.1 -2,-0.3 2,-0.5 -0.823 22.5-150.6 -96.6 136.7 9.7 13.5 13.0 79 79 A V E +DE 58 88C 0 9,-2.6 8,-2.8 -2,-0.4 9,-1.3 -0.988 23.3 167.5-112.7 122.5 10.8 11.9 9.7 80 80 A F E -DE 57 86C 0 -23,-2.0 -23,-2.4 -2,-0.5 6,-0.2 -0.938 20.8-138.0-127.1 165.5 8.1 11.3 7.1 81 81 A N E > -D 56 0C 1 4,-2.1 3,-1.4 -2,-0.3 -25,-0.2 -0.351 40.3 -82.3-111.0-168.8 8.0 10.4 3.5 82 82 A E T 3 S+ 0 0 78 -27,-0.7 -26,-0.1 1,-0.3 -28,-0.1 0.644 126.4 53.8 -67.6 -18.3 6.0 11.5 0.3 83 83 A N T 3 S- 0 0 106 -30,-0.2 -1,-0.3 2,-0.1 3,-0.1 0.270 118.8-107.9 -98.7 2.1 3.0 9.2 1.2 84 84 A N S < S+ 0 0 64 -3,-1.4 2,-0.4 1,-0.3 -2,-0.1 0.858 72.6 145.0 65.8 35.8 2.7 10.8 4.7 85 85 A Q - 0 0 81 -32,-0.1 -4,-2.1 -4,-0.0 2,-0.4 -0.916 52.8-118.8-101.6 135.4 4.0 7.6 6.4 86 86 A L E -E 80 0C 47 -2,-0.4 -6,-0.3 -6,-0.2 3,-0.1 -0.636 28.1-179.9 -78.4 126.8 6.2 8.0 9.5 87 87 A A E - 0 0 13 -8,-2.8 -36,-0.4 -2,-0.4 2,-0.3 0.809 59.6 -49.9 -89.5 -44.0 9.7 6.7 9.1 88 88 A G E -E 79 0C 6 -9,-1.3 -9,-2.6 -38,-0.1 2,-0.4 -0.976 39.8-106.0 178.5 173.4 11.0 7.5 12.6 89 89 A V E +E 78 0C 2 -2,-0.3 14,-2.6 14,-0.2 2,-0.3 -0.997 46.2 179.2-123.6 116.2 11.4 9.9 15.5 90 90 A I E -EF 77 102C 0 -13,-2.7 -13,-3.1 -2,-0.4 2,-0.3 -0.874 13.2-159.3-123.0 159.6 15.0 11.1 15.8 91 91 A T E -EF 76 101C 3 10,-2.8 10,-2.3 -2,-0.3 -15,-0.2 -0.997 27.8-149.9-144.7 145.2 17.2 13.4 18.0 92 92 A N S > S+ 0 0 21 -17,-1.7 3,-1.7 -2,-0.3 2,-0.2 0.636 74.9 107.1 -77.4 -19.0 20.5 15.3 18.0 93 93 A T T 3 S+ 0 0 58 1,-0.3 -86,-0.2 8,-0.1 8,-0.1 -0.458 88.2 11.8 -67.5 122.9 20.5 14.8 21.9 94 94 A G T 3 S+ 0 0 80 1,-0.3 2,-0.3 -2,-0.2 -1,-0.3 0.500 110.1 99.7 83.4 8.1 23.2 12.2 22.8 95 95 A A S < S- 0 0 23 -3,-1.7 -1,-0.3 4,-0.2 2,-0.1 -0.933 81.3-101.7-121.4 145.8 24.8 12.3 19.4 96 96 A S S > S- 0 0 93 -2,-0.3 3,-1.9 4,-0.1 -3,-0.0 -0.467 77.1 -33.9 -73.1 136.6 27.9 14.2 18.4 97 97 A G T 3 S- 0 0 73 1,-0.3 -2,-0.2 -2,-0.1 0, 0.0 -0.206 125.6 -20.4 60.2-122.5 27.5 17.6 16.5 98 98 A N T 3 S+ 0 0 119 2,-0.0 -1,-0.3 0, 0.0 2,-0.1 0.059 104.3 122.6-104.9 21.2 24.6 17.6 14.1 99 99 A N < - 0 0 80 -3,-1.9 2,-0.3 -7,-0.2 -4,-0.2 -0.418 54.2-131.7 -79.4 159.5 24.4 13.7 13.9 100 100 A F - 0 0 14 -2,-0.1 2,-0.3 -6,-0.1 -8,-0.2 -0.834 17.0-167.8-117.1 149.7 21.2 11.9 14.9 101 101 A V E -F 91 0C 57 -10,-2.3 -10,-2.8 -2,-0.3 2,-0.1 -0.914 35.3-101.4-124.2 154.3 20.3 8.9 17.1 102 102 A E E -F 90 0C 96 -2,-0.3 2,-0.5 -12,-0.2 -12,-0.2 -0.461 34.1-114.0 -77.9 143.5 16.9 7.2 17.1 103 103 A b 0 0 12 -14,-2.6 -97,-0.2 -2,-0.1 -14,-0.2 -0.776 360.0 360.0 -81.4 125.1 14.4 7.9 19.9 104 104 A T 0 0 140 -99,-1.5 -98,-0.1 -2,-0.5 -1,-0.1 0.734 360.0 360.0 -71.8 360.0 13.8 4.9 22.1