==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ENDORIBONUCLEASE 13-JAN-98 4BIR . COMPND 2 MOLECULE: GUANYL-SPECIFIC RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR J.DOUMEN,J.STEYAERT . 104 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5533.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 55.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 27 26.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 14.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 149 0, 0.0 2,-0.4 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 156.7 6.1 -4.6 15.5 2 2 A a - 0 0 51 1,-0.1 10,-0.2 10,-0.1 3,-0.2 -0.869 360.0-165.3 -98.8 130.0 7.3 -1.6 13.7 3 3 A D S S+ 0 0 87 8,-2.4 2,-0.3 -2,-0.4 9,-0.2 0.779 90.0 15.1 -77.8 -29.1 6.1 1.7 14.2 4 4 A Y E -A 11 0A 61 7,-1.6 7,-2.4 -3,-0.1 2,-0.4 -0.997 68.3-164.7-143.1 129.7 7.8 2.9 10.9 5 5 A T E -A 10 0A 47 -2,-0.3 99,-2.6 5,-0.2 2,-0.6 -0.979 5.1-176.3-118.8 120.8 9.1 0.5 8.3 6 6 A b E > -A 9 0A 0 3,-2.3 3,-2.4 -2,-0.4 2,-0.5 -0.944 68.9 -52.4-120.0 100.3 11.5 2.1 5.6 7 7 A G T 3 S- 0 0 47 -2,-0.6 97,-0.1 1,-0.3 84,-0.0 -0.546 124.6 -23.0 68.8-115.4 12.3 -0.6 3.0 8 8 A S T 3 S+ 0 0 117 -2,-0.5 2,-0.5 -3,-0.1 -1,-0.3 0.374 114.9 107.0-109.4 10.2 13.5 -3.4 5.2 9 9 A N E < -A 6 0A 50 -3,-2.4 -3,-2.3 -7,-0.0 2,-0.5 -0.663 55.2-153.5 -89.0 124.8 14.4 -1.2 8.2 10 10 A a E -A 5 0A 67 -2,-0.5 2,-0.4 -5,-0.3 -5,-0.2 -0.885 13.2-172.8-104.9 129.0 12.0 -1.3 11.3 11 11 A Y E -A 4 0A 3 -7,-2.4 -8,-2.4 -2,-0.5 -7,-1.6 -0.922 11.6-147.6-124.4 135.2 11.8 1.6 13.6 12 12 A S > - 0 0 37 -2,-0.4 4,-1.9 -10,-0.2 3,-0.2 -0.675 35.7-107.6 -98.2 162.1 10.1 2.2 17.1 13 13 A S H > S+ 0 0 61 -2,-0.2 4,-2.1 1,-0.2 -1,-0.1 0.869 122.4 57.9 -57.8 -33.7 8.7 5.4 18.3 14 14 A S H > S+ 0 0 77 2,-0.2 4,-2.3 1,-0.2 5,-0.2 0.890 104.4 53.0 -65.4 -39.7 11.7 5.6 20.8 15 15 A D H > S+ 0 0 49 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.904 110.4 46.6 -62.6 -46.3 14.1 5.4 17.7 16 16 A V H X S+ 0 0 4 -4,-1.9 4,-2.2 2,-0.2 -1,-0.2 0.853 113.0 47.7 -68.2 -40.4 12.4 8.2 16.0 17 17 A S H X S+ 0 0 75 -4,-2.1 4,-1.9 2,-0.2 -2,-0.2 0.884 111.2 50.5 -65.2 -36.4 12.3 10.4 19.2 18 18 A T H X S+ 0 0 77 -4,-2.3 4,-1.6 2,-0.2 -2,-0.2 0.890 115.2 45.9 -61.9 -52.0 16.1 9.8 20.0 19 19 A A H X S+ 0 0 8 -4,-2.0 4,-2.2 1,-0.2 5,-0.2 0.965 113.1 47.1 -54.5 -62.0 17.0 10.8 16.3 20 20 A Q H X S+ 0 0 20 -4,-2.2 4,-2.5 1,-0.2 -1,-0.2 0.876 108.1 54.9 -54.7 -38.4 14.9 13.8 16.2 21 21 A A H X S+ 0 0 59 -4,-1.9 4,-2.1 2,-0.2 -1,-0.2 0.899 110.6 47.2 -60.6 -41.9 16.2 15.1 19.6 22 22 A A H X S+ 0 0 27 -4,-1.6 4,-1.7 2,-0.2 -2,-0.2 0.940 116.0 44.5 -63.5 -52.2 19.9 14.8 18.3 23 23 A G H X S+ 0 0 0 -4,-2.2 4,-1.8 1,-0.2 -1,-0.2 0.902 111.6 51.7 -61.0 -42.5 19.0 16.6 15.0 24 24 A Y H X S+ 0 0 30 -4,-2.5 4,-2.1 -5,-0.2 -2,-0.2 0.911 107.6 52.3 -65.4 -42.6 16.9 19.3 16.7 25 25 A K H X S+ 0 0 118 -4,-2.1 4,-2.1 1,-0.2 -1,-0.2 0.910 109.4 50.5 -57.3 -47.1 19.8 20.1 19.1 26 26 A L H X>S+ 0 0 29 -4,-1.7 5,-2.1 2,-0.2 4,-0.6 0.894 109.4 52.0 -58.2 -42.1 22.2 20.5 16.1 27 27 A H H ><5S+ 0 0 43 -4,-1.8 3,-0.9 1,-0.2 -2,-0.2 0.939 109.8 46.5 -66.9 -41.3 19.7 22.8 14.5 28 28 A E H 3<5S+ 0 0 128 -4,-2.1 -2,-0.2 1,-0.2 -1,-0.2 0.900 113.9 49.9 -62.6 -41.3 19.4 25.0 17.6 29 29 A D H 3<5S- 0 0 92 -4,-2.1 -1,-0.2 -5,-0.1 -2,-0.2 0.455 110.0-122.9 -75.3 -6.1 23.4 25.0 17.8 30 30 A G T <<5 + 0 0 72 -3,-0.9 2,-0.3 -4,-0.6 -3,-0.2 0.840 69.6 130.5 61.8 37.4 23.7 26.0 14.1 31 31 A E < - 0 0 103 -5,-2.1 2,-0.3 -6,-0.1 -1,-0.3 -0.794 40.0-169.1-122.1 159.7 25.8 23.0 13.5 32 32 A T - 0 0 63 -2,-0.3 2,-0.3 -3,-0.1 5,-0.1 -0.955 6.0-154.4-145.2 159.7 26.1 20.0 11.2 33 33 A V B > +B 38 0B 39 5,-2.3 5,-2.4 -2,-0.3 37,-0.2 -0.957 50.5 34.8-135.3 155.3 27.8 16.7 10.9 34 34 A G T > 5S- 0 0 28 -2,-0.3 3,-1.8 35,-0.3 38,-0.1 0.113 91.7 -73.4 83.4 162.5 28.9 14.4 8.0 35 35 A S T 3 5S+ 0 0 122 1,-0.3 -1,-0.1 36,-0.2 37,-0.1 0.844 133.1 49.3 -56.6 -36.4 30.1 15.1 4.4 36 36 A N T 3 5S- 0 0 110 -3,-0.1 -1,-0.3 4,-0.0 -2,-0.1 0.234 112.3-120.3 -96.4 14.9 26.5 16.1 3.4 37 37 A S T < 5 - 0 0 57 -3,-1.8 -3,-0.2 1,-0.2 -2,-0.1 0.951 36.8-133.3 47.8 75.9 26.0 18.5 6.3 38 38 A Y B + 0 0 48 -2,-0.5 3,-1.7 1,-0.2 -2,-0.0 -0.251 47.9 145.6 -93.4 66.7 8.6 18.8 0.1 45 45 A Y T 3 + 0 0 140 -2,-1.8 -1,-0.2 1,-0.3 54,-0.0 0.781 68.5 63.6 -67.4 -24.1 8.6 18.5 -3.7 46 46 A E T 3 S- 0 0 63 -3,-0.4 -1,-0.3 1,-0.0 -2,-0.1 0.607 105.6-127.9 -78.0 -8.0 7.0 15.2 -3.5 47 47 A G < + 0 0 59 -3,-1.7 -2,-0.1 1,-0.2 2,-0.1 0.825 37.1 179.2 68.6 34.4 3.8 16.6 -1.8 48 48 A F - 0 0 26 1,-0.1 2,-1.2 53,-0.0 -1,-0.2 -0.419 36.9-112.5 -64.2 140.9 3.8 14.3 1.1 49 49 A D + 0 0 156 -2,-0.1 2,-0.4 2,-0.1 -1,-0.1 -0.576 45.1 174.0 -77.7 94.7 0.8 15.1 3.4 50 50 A F - 0 0 19 -2,-1.2 38,-0.1 1,-0.1 37,-0.1 -0.915 25.8-154.7 -98.0 136.1 2.4 16.5 6.6 51 51 A S S S+ 0 0 126 -2,-0.4 2,-0.4 36,-0.3 -1,-0.1 -0.027 77.7 72.0 -99.0 22.2 0.1 17.9 9.3 52 52 A V S S- 0 0 20 35,-0.1 2,-0.2 33,-0.1 -2,-0.1 -0.968 87.6-113.8-131.9 148.0 2.8 20.1 10.6 53 53 A S - 0 0 75 -2,-0.4 29,-0.3 1,-0.1 32,-0.1 -0.448 38.8 -70.5 -91.8 160.4 3.9 23.1 8.8 54 54 A S S S+ 0 0 77 -2,-0.2 2,-0.2 27,-0.1 -1,-0.1 -0.122 78.7 86.9 -67.2 165.8 7.3 24.0 7.1 55 55 A P - 0 0 48 0, 0.0 27,-1.4 0, 0.0 2,-0.4 0.557 67.4-168.6 -69.2 152.2 10.1 24.8 7.3 56 56 A Y E -CD 42 81C 26 -14,-0.6 -14,-2.9 25,-0.2 2,-0.3 -0.890 13.3-164.7-122.3 147.6 11.2 21.4 7.4 57 57 A Y E -CD 41 80C 31 23,-2.7 23,-2.5 -2,-0.4 2,-0.4 -0.962 9.2-144.9-130.0 145.1 14.6 19.7 8.1 58 58 A E E +CD 40 79C 17 -18,-2.2 -18,-1.3 -2,-0.3 21,-0.2 -0.876 16.5 175.3-114.0 148.7 15.9 16.3 7.6 59 59 A W E - D 0 78C 2 19,-1.6 19,-2.9 -2,-0.4 -36,-0.1 -0.964 35.2-102.0-148.7 136.1 18.3 14.1 9.7 60 60 A P E - D 0 77C 0 0, 0.0 8,-0.5 0, 0.0 2,-0.4 -0.181 25.8-164.0 -68.9 139.8 19.4 10.7 9.3 61 61 A I E - D 0 76C 8 15,-1.8 15,-0.5 12,-0.2 2,-0.4 -0.993 17.4-144.1-115.7 132.6 18.0 7.8 11.3 62 62 A L > - 0 0 37 4,-0.6 3,-1.9 -2,-0.4 12,-0.1 -0.779 17.8-131.5-106.8 141.9 20.0 4.6 11.3 63 63 A S T 3 S+ 0 0 81 -2,-0.4 -1,-0.1 1,-0.3 -53,-0.1 0.811 102.1 64.7 -58.9 -33.0 19.0 1.2 11.3 64 64 A S T 3 S- 0 0 74 1,-0.1 -1,-0.3 2,-0.1 3,-0.1 0.637 107.5-114.7 -69.7 -12.5 21.4 0.3 14.2 65 65 A G S < S+ 0 0 39 -3,-1.9 -1,-0.1 1,-0.4 -2,-0.1 0.187 76.0 127.6 97.0 -18.9 19.8 2.5 16.9 66 66 A D - 0 0 110 1,-0.1 -4,-0.6 -5,-0.0 -1,-0.4 -0.409 65.9-114.8 -72.1 151.7 22.9 4.7 17.0 67 67 A V - 0 0 60 -3,-0.1 2,-0.2 -6,-0.1 -6,-0.1 -0.640 40.7 -97.8 -83.0 144.6 22.6 8.4 16.7 68 68 A Y + 0 0 9 -8,-0.5 3,-0.1 -2,-0.3 -1,-0.1 -0.488 48.5 162.1 -68.2 131.7 24.3 9.8 13.4 69 69 A S - 0 0 107 1,-0.5 -35,-0.3 -2,-0.2 2,-0.2 0.195 62.7 -64.6-131.4 8.1 27.7 11.2 14.1 70 70 A G S S+ 0 0 26 -37,-0.2 -1,-0.5 2,-0.1 2,-0.1 -0.744 93.7 79.7 128.7 179.1 29.3 11.3 10.5 71 71 A G S S- 0 0 60 -2,-0.2 -36,-0.2 -3,-0.1 -1,-0.1 -0.423 97.5 -0.9 81.0-168.3 30.2 8.6 8.1 72 72 A S - 0 0 102 1,-0.2 -2,-0.1 -38,-0.1 -38,-0.0 -0.543 57.3-162.2 -65.2 122.3 27.4 6.9 5.9 73 73 A P - 0 0 28 0, 0.0 3,-0.4 0, 0.0 -12,-0.2 0.442 26.5-146.5 -82.7 -9.2 23.9 8.3 6.6 74 74 A G - 0 0 39 1,-0.2 -12,-0.1 -14,-0.1 0, 0.0 -0.218 34.2 -71.3 74.1-167.0 22.1 5.5 5.1 75 75 A A S S+ 0 0 22 -14,-0.1 17,-2.2 -69,-0.1 2,-0.4 0.572 99.0 90.7-106.8 -6.3 18.8 6.1 3.3 76 76 A D E +DE 61 91C 2 -15,-0.5 -15,-1.8 -3,-0.4 2,-0.3 -0.737 47.6 175.5-102.6 153.8 16.4 6.9 6.1 77 77 A R E -DE 60 90C 5 13,-2.9 13,-2.3 -2,-0.4 2,-0.4 -1.000 26.0-135.7-147.0 151.6 15.6 10.1 7.5 78 78 A V E -DE 59 89C 0 -19,-2.9 -19,-1.6 -2,-0.3 2,-0.5 -0.761 20.7-150.8 -97.1 143.4 13.4 12.0 10.1 79 79 A V E +DE 58 88C 0 9,-2.4 8,-3.0 -2,-0.4 9,-1.3 -0.977 22.2 167.4-115.6 127.5 11.8 15.1 9.1 80 80 A F E -DE 57 86C 0 -23,-2.5 -23,-2.7 -2,-0.5 6,-0.2 -0.832 22.4-129.9-127.3 165.2 11.0 17.8 11.7 81 81 A N E > -D 56 0C 1 4,-1.8 3,-2.0 -2,-0.3 -25,-0.2 -0.566 39.0 -82.4-113.0-177.0 10.0 21.4 11.6 82 82 A E T 3 S+ 0 0 69 -27,-1.4 -26,-0.1 1,-0.3 -28,-0.1 0.667 125.5 51.0 -54.8 -29.9 11.1 24.6 13.0 83 83 A N T 3 S- 0 0 116 2,-0.1 -1,-0.3 3,-0.0 3,-0.1 0.062 119.4-104.4 -94.1 12.8 9.1 23.9 16.3 84 84 A N S < S+ 0 0 70 -3,-2.0 2,-0.4 1,-0.2 -2,-0.2 0.903 72.4 147.8 61.2 40.1 10.5 20.6 16.8 85 85 A Q - 0 0 87 -4,-0.2 -4,-1.8 -32,-0.1 2,-0.3 -0.933 52.9-114.2-103.9 134.5 7.4 18.7 15.7 86 86 A L E +E 80 0C 59 -2,-0.4 -6,-0.2 -6,-0.2 3,-0.1 -0.458 32.6 178.7 -70.5 131.1 7.7 15.5 14.0 87 87 A A E - 0 0 17 -8,-3.0 -36,-0.3 1,-0.4 2,-0.3 0.896 56.1 -61.7-103.0 -45.4 6.5 15.6 10.1 88 88 A G E -E 79 0C 10 -9,-1.3 -9,-2.4 -38,-0.1 2,-0.5 -0.908 41.2 -95.8 177.0 178.6 7.2 12.2 9.1 89 89 A V E -E 78 0C 5 -2,-0.3 14,-3.0 14,-0.2 2,-0.3 -0.961 44.9-179.2-124.9 123.6 9.8 9.4 8.5 90 90 A I E -EF 77 102C 0 -13,-2.3 -13,-2.9 -2,-0.5 2,-0.3 -0.857 10.7-159.7-120.1 155.6 11.1 9.1 4.8 91 91 A T E -EF 76 101C 2 10,-3.3 10,-2.3 -2,-0.3 -15,-0.2 -0.988 25.8-150.7-143.6 155.8 13.4 6.9 2.8 92 92 A Q S > S+ 0 0 74 -17,-2.2 3,-2.1 -2,-0.3 2,-0.2 0.599 71.5 112.6 -91.5 -9.7 15.5 6.8 -0.5 93 93 A T T 3 S+ 0 0 62 1,-0.3 -86,-0.2 -18,-0.3 -2,-0.1 -0.472 86.1 10.7 -64.3 124.5 15.0 3.2 -0.5 94 94 A G T 3 S+ 0 0 81 1,-0.3 2,-0.4 -2,-0.2 -1,-0.3 0.507 110.3 106.5 84.8 2.6 12.8 2.3 -3.5 95 95 A A < - 0 0 26 -3,-2.1 -1,-0.3 4,-0.2 2,-0.2 -0.923 67.7-123.7-118.5 145.9 13.1 5.7 -4.9 96 96 A S > - 0 0 88 -2,-0.4 3,-2.8 4,-0.1 -3,-0.0 -0.582 61.2 -43.5 -89.4 155.5 15.1 7.0 -8.0 97 97 A G T 3 S- 0 0 75 1,-0.3 -2,-0.1 -2,-0.2 0, 0.0 0.059 130.0 -0.9 42.5-110.8 17.7 9.6 -7.9 98 98 A N T 3 S+ 0 0 63 2,-0.0 -1,-0.3 0, 0.0 2,-0.1 0.237 105.8 109.9 -97.0 16.4 16.5 12.4 -5.9 99 99 A N < - 0 0 62 -3,-2.8 2,-0.3 -7,-0.1 -4,-0.2 -0.443 45.9-161.3 -90.5 167.9 13.1 11.1 -4.9 100 100 A F - 0 0 18 -2,-0.1 2,-0.3 -6,-0.1 -8,-0.2 -0.922 1.9-157.6-138.3 162.5 12.0 9.9 -1.5 101 101 A V E -F 91 0C 58 -10,-2.3 -10,-3.3 -2,-0.3 2,-0.2 -0.925 30.3 -97.6-137.2 156.4 9.1 7.7 -0.5 102 102 A E E -F 90 0C 92 -2,-0.3 2,-0.3 -12,-0.2 -12,-0.3 -0.545 30.2-119.6 -84.6 154.2 7.3 7.6 2.9 103 103 A b 0 0 14 -14,-3.0 -97,-0.2 -2,-0.2 -14,-0.2 -0.568 360.0 360.0 -77.1 144.3 8.1 5.0 5.5 104 104 A T 0 0 144 -99,-2.6 -98,-0.1 -2,-0.3 -1,-0.1 0.597 360.0 360.0-105.5 360.0 5.0 3.0 6.3