==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METALLOPROTEASE 29-JUL-98 1BM6 . COMPND 2 MOLECULE: STROMELYSIN-1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR Y.LI,X.ZHANG,R.MELTON,V.GANU,N.C.GONNELLA . 174 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 9619.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 84 48.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 15 8.6 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 6 3.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 0.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 0.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 6.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 36 20.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 83 A F 0 0 233 0, 0.0 2,-0.3 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 98.0 8.3 -10.0 1.4 2 84 A R - 0 0 153 1,-0.2 128,-0.1 126,-0.0 125,-0.0 -0.923 360.0 -14.9-173.6-162.2 7.5 -9.9 -2.4 3 85 A T S S- 0 0 15 -2,-0.3 -1,-0.2 126,-0.2 124,-0.1 -0.055 74.4-103.1 -50.3 160.1 5.9 -11.9 -5.2 4 86 A F > - 0 0 89 3,-0.3 3,-1.9 155,-0.1 2,-1.6 -0.791 27.4-148.0 -95.1 105.8 5.3 -15.6 -4.5 5 87 A P T 3 S+ 0 0 115 0, 0.0 -1,-0.0 0, 0.0 -2,-0.0 -0.529 90.4 19.6 -72.1 89.6 8.0 -17.6 -6.2 6 88 A G T 3 S+ 0 0 63 -2,-1.6 -2,-0.0 0, 0.0 0, 0.0 0.374 110.2 79.6 129.2 1.4 6.0 -20.8 -7.0 7 89 A I < - 0 0 111 -3,-1.9 -3,-0.3 0, 0.0 2,-0.2 -0.699 60.6-164.1-141.9 88.6 2.4 -19.5 -6.7 8 90 A P - 0 0 78 0, 0.0 155,-0.1 0, 0.0 3,-0.1 -0.500 15.5-140.9 -72.2 133.2 1.2 -17.6 -9.8 9 91 A K S S+ 0 0 20 -2,-0.2 2,-0.4 1,-0.2 116,-0.1 0.992 83.8 19.0 -59.2 -75.6 -2.0 -15.6 -9.1 10 92 A W + 0 0 9 114,-0.2 -1,-0.2 1,-0.1 5,-0.1 -0.774 57.7 177.9 -99.7 143.2 -4.0 -16.2 -12.3 11 93 A R + 0 0 225 -2,-0.4 -1,-0.1 -3,-0.1 -2,-0.1 0.756 52.9 94.1-109.3 -40.9 -3.2 -19.1 -14.6 12 94 A K S S- 0 0 96 1,-0.1 3,-0.1 2,-0.1 -2,-0.0 0.113 74.0-131.4 -43.6 170.8 -5.8 -18.7 -17.4 13 95 A T S S+ 0 0 62 1,-0.2 36,-1.7 35,-0.1 2,-0.4 0.401 91.0 55.4-110.1 1.2 -4.8 -16.7 -20.5 14 96 A H E +a 49 0A 113 34,-0.2 36,-0.2 2,-0.0 -1,-0.2 -0.776 65.1 174.5-138.0 96.0 -7.8 -14.5 -20.6 15 97 A L E -a 50 0A 1 34,-2.0 36,-1.9 -2,-0.4 2,-0.3 -0.445 10.3-160.6 -92.4 170.8 -8.7 -12.4 -17.5 16 98 A T E -a 51 0A 25 34,-0.3 43,-2.8 -2,-0.1 44,-1.8 -0.981 1.4-159.3-147.2 157.2 -11.5 -9.8 -17.3 17 99 A Y E -ab 52 60A 18 34,-1.6 36,-1.4 -2,-0.3 2,-0.5 -0.913 12.4-134.7-137.1 166.3 -12.2 -6.9 -14.9 18 100 A R E -ab 53 61A 27 42,-1.6 44,-2.0 -2,-0.3 2,-1.7 -0.973 13.6-140.1-125.2 124.4 -15.2 -4.8 -13.8 19 101 A I E + b 0 62A 13 34,-1.0 44,-0.2 -2,-0.5 13,-0.1 -0.550 44.7 146.3 -83.1 83.5 -15.0 -1.0 -13.5 20 102 A V E + b 0 63A 37 42,-3.9 44,-1.6 -2,-1.7 43,-0.3 0.336 45.8 93.3 -98.7 7.2 -17.0 -0.5 -10.4 21 103 A N + 0 0 2 41,-0.6 2,-0.3 42,-0.4 11,-0.1 -0.627 45.4 141.5 -97.0 160.9 -14.9 2.5 -9.2 22 104 A Y + 0 0 115 -2,-0.2 3,-0.1 9,-0.1 6,-0.1 -0.963 16.5 177.9 178.1 167.5 -15.7 6.2 -9.9 23 105 A T B > -E 26 0B 8 3,-1.8 3,-1.6 -2,-0.3 8,-0.2 -0.945 46.4-104.5-176.5 159.5 -15.6 9.7 -8.4 24 106 A P T 3 S+ 0 0 114 0, 0.0 -1,-0.1 0, 0.0 79,-0.0 0.814 123.7 60.5 -66.1 -25.9 -16.3 13.3 -9.2 25 107 A D T 3 S+ 0 0 48 1,-0.3 84,-0.1 -3,-0.1 85,-0.1 0.651 119.3 29.5 -74.2 -11.0 -12.5 13.6 -9.4 26 108 A L B < S-E 23 0B 9 -3,-1.6 -3,-1.8 79,-0.1 -1,-0.3 -0.818 78.1-149.1-153.2 111.2 -12.8 11.1 -12.2 27 109 A P >>> - 0 0 81 0, 0.0 4,-2.1 0, 0.0 3,-0.9 0.000 52.2 -73.1 -65.8 178.4 -15.8 10.6 -14.5 28 110 A K H 3>5S+ 0 0 108 1,-0.3 4,-2.9 2,-0.2 5,-0.3 0.923 137.7 42.6 -38.9 -65.4 -16.6 7.1 -15.9 29 111 A D H 3>5S+ 0 0 113 3,-0.2 4,-0.8 2,-0.2 -1,-0.3 0.785 113.7 54.7 -58.7 -26.8 -13.6 7.1 -18.3 30 112 A A H <>5S+ 0 0 16 -3,-0.9 4,-1.9 2,-0.2 5,-0.3 0.989 115.8 33.4 -74.4 -60.5 -11.3 8.6 -15.6 31 113 A V H X5S+ 0 0 0 -4,-2.1 4,-1.8 1,-0.3 5,-0.2 0.961 121.5 51.5 -58.2 -42.4 -11.9 6.0 -12.9 32 114 A D H XX S+ 0 0 18 -4,-0.8 4,-3.5 -5,-0.3 3,-2.2 0.994 101.2 45.2 -57.7 -64.1 -9.0 5.0 -16.8 34 116 A A H 3X S+ 0 0 0 -4,-1.9 4,-2.7 1,-0.3 5,-0.4 0.858 113.0 52.9 -49.2 -33.0 -7.0 3.8 -13.7 35 117 A V H 3X S+ 0 0 0 -4,-1.8 4,-1.1 -5,-0.3 -1,-0.3 0.788 114.9 41.8 -73.0 -24.3 -8.8 0.5 -14.3 36 118 A E H > - 0 0 8 -9,-0.3 4,-2.9 1,-0.1 5,-0.5 -0.368 48.2-171.6-160.4 68.1 -3.1 8.6 -7.7 113 195 A L H >5S+ 0 0 1 -8,-2.7 4,-1.3 -6,-0.3 3,-0.3 0.830 87.2 18.4 -29.7 -97.1 -5.8 7.2 -10.0 114 196 A F H >5S+ 0 0 3 31,-0.4 4,-3.0 1,-0.2 5,-0.4 0.773 119.3 70.6 -56.8 -20.0 -4.0 4.6 -12.2 115 197 A L H >5S+ 0 0 0 -10,-0.3 4,-1.2 1,-0.3 -1,-0.2 0.998 110.8 28.7 -60.1 -62.3 -1.2 4.6 -9.6 116 198 A V H X5S+ 0 0 7 -4,-2.9 4,-2.0 -3,-0.3 -1,-0.3 0.639 117.7 66.6 -71.3 -8.1 -3.3 2.8 -7.1 117 199 A A H XXS+ 0 0 0 -4,-1.3 4,-3.3 -5,-0.5 5,-0.6 0.980 106.6 35.4 -77.1 -58.1 -5.2 1.3 -10.0 118 200 A A H X5S+ 0 0 0 -4,-3.0 4,-1.0 1,-0.2 -2,-0.2 0.775 113.2 66.6 -65.6 -14.7 -2.3 -0.8 -11.3 119 201 A H H X5S+ 0 0 8 -4,-1.2 4,-1.0 -5,-0.4 -1,-0.2 0.974 113.9 25.9 -68.3 -48.9 -1.6 -1.1 -7.6 120 202 A E H X5S+ 0 0 0 -4,-2.0 4,-2.2 -3,-0.3 5,-0.3 0.933 125.9 47.0 -80.4 -45.9 -4.8 -3.1 -7.0 121 203 A I H X5S+ 0 0 0 -4,-3.3 4,-1.7 1,-0.3 -3,-0.2 0.894 117.6 47.2 -62.1 -31.0 -5.1 -4.6 -10.6 122 204 A G H XXS+ 0 0 0 -4,-1.0 5,-4.0 -5,-0.6 4,-1.0 0.834 105.4 61.1 -75.9 -31.5 -1.5 -5.3 -10.1 123 205 A H H <5S+ 0 0 30 -4,-1.0 -2,-0.2 3,-0.2 -1,-0.2 0.943 118.9 23.2 -61.5 -49.6 -2.2 -6.7 -6.6 124 206 A S H <5S+ 0 0 0 -4,-2.2 -114,-0.2 1,-0.1 -2,-0.2 0.936 142.4 19.7 -86.3 -53.0 -4.5 -9.5 -7.9 125 207 A L H <5S+ 0 0 1 -4,-1.7 -2,-0.2 -5,-0.3 -3,-0.2 0.078 130.0 46.1-104.5 24.7 -3.4 -10.1 -11.6 126 208 A G T <5S- 0 0 0 -4,-1.0 37,-0.3 1,-0.3 2,-0.3 0.517 103.5 -78.4-127.0 -79.6 -0.0 -8.5 -11.2 127 209 A L < - 0 0 0 -5,-4.0 -1,-0.3 1,-0.2 29,-0.1 -0.900 33.5 -93.5-169.0-162.3 2.2 -9.4 -8.2 128 210 A F S S- 0 0 75 -2,-0.3 2,-0.2 28,-0.0 -1,-0.2 0.847 86.2 -37.7 -99.6 -72.6 2.8 -8.7 -4.5 129 211 A H + 0 0 62 26,-0.1 -126,-0.2 27,-0.0 2,-0.1 -0.683 60.1 179.7-161.1 101.8 5.4 -5.9 -4.1 130 212 A S - 0 0 15 -2,-0.2 2,-2.1 -128,-0.1 26,-0.2 -0.331 59.8 -59.6 -93.3-178.1 8.5 -5.4 -6.3 131 213 A A >> + 0 0 38 1,-0.2 4,-1.2 -2,-0.1 3,-0.8 -0.367 66.1 167.4 -61.9 86.1 11.1 -2.7 -6.0 132 214 A N T 34 + 0 0 15 -2,-2.1 6,-0.4 2,-0.2 -1,-0.2 0.414 43.7 108.3 -89.7 10.2 8.5 0.0 -6.4 133 215 A T T 34 S+ 0 0 124 1,-0.2 -1,-0.2 4,-0.1 -2,-0.1 0.901 114.2 9.4 -49.4 -28.1 10.9 2.8 -5.3 134 216 A E T <4 S+ 0 0 148 -3,-0.8 -1,-0.2 0, 0.0 -2,-0.2 0.631 126.7 80.1-116.3 -36.0 10.5 3.2 -9.0 135 217 A A S < S- 0 0 1 -4,-1.2 3,-0.3 17,-0.2 -3,-0.1 0.200 93.2 -99.0 -63.7-170.2 7.6 0.8 -9.7 136 218 A L S S+ 0 0 1 1,-0.2 4,-0.4 2,-0.1 -1,-0.1 0.597 108.3 73.6 -90.4 -16.1 3.9 1.4 -9.1 137 219 A M S S+ 0 0 6 1,-0.2 -1,-0.2 2,-0.1 -5,-0.1 0.666 112.0 24.9 -78.4 -7.4 3.6 -0.4 -5.7 138 220 A Y S S+ 0 0 158 -6,-0.4 3,-0.2 -3,-0.3 -1,-0.2 0.306 94.1 89.4-137.3 15.6 5.4 2.3 -3.8 139 221 A P + 0 0 11 0, 0.0 -2,-0.1 0, 0.0 -3,-0.1 0.867 63.3 92.3 -78.4 -37.0 5.0 5.6 -5.8 140 222 A L S S+ 0 0 43 -4,-0.4 2,-4.1 1,-0.3 4,-0.1 0.770 75.4 64.6 -21.5 -59.2 1.8 6.5 -4.0 141 223 A Y S S+ 0 0 216 -3,-0.2 -1,-0.3 2,-0.1 2,-0.2 -0.174 118.8 18.5 -68.0 56.8 3.8 8.5 -1.4 142 224 A H S S- 0 0 141 -2,-4.1 2,-0.3 0, 0.0 -2,-0.1 -0.711 105.4 -66.6 179.2-124.1 4.8 10.9 -4.2 143 225 A S + 0 0 35 -2,-0.2 -35,-0.1 1,-0.1 -31,-0.1 -0.853 66.4 114.6-161.0 121.6 3.3 11.6 -7.7 144 226 A L + 0 0 25 -2,-0.3 7,-0.5 -37,-0.2 -37,-0.1 0.142 34.6 113.8 179.4 43.8 3.1 9.4 -10.8 145 227 A T S S- 0 0 0 -38,-0.2 -31,-0.4 -34,-0.2 -38,-0.2 0.573 110.0 -35.2 -99.9 -10.4 -0.5 8.5 -11.8 146 228 A D S S+ 0 0 35 -33,-0.1 -39,-0.3 -32,-0.1 -40,-0.1 0.250 101.9 116.8 179.6 -25.4 -0.4 10.5 -15.0 147 229 A L S S- 0 0 38 -41,-0.6 -3,-0.1 1,-0.2 -40,-0.1 0.787 100.7 -57.3 -25.7 -97.8 1.8 13.6 -14.5 148 230 A T S S+ 0 0 119 -41,-0.0 -1,-0.2 0, 0.0 -4,-0.1 0.420 136.6 34.3-135.3 -6.1 4.7 13.0 -16.9 149 231 A R S S+ 0 0 138 -6,-0.1 -5,-0.1 2,-0.0 -2,-0.1 0.693 70.2 151.7-117.7 -38.2 6.1 9.6 -15.9 150 232 A F + 0 0 72 -44,-0.1 2,-0.3 -7,-0.1 -5,-0.2 0.537 37.3 98.5 1.0 101.7 3.0 7.7 -14.7 151 233 A R S S- 0 0 147 -7,-0.5 2,-0.1 -16,-0.1 -1,-0.1 -0.977 71.8 -82.2 178.3 174.6 4.0 4.0 -15.3 152 234 A L - 0 0 19 -2,-0.3 -17,-0.2 1,-0.1 2,-0.1 -0.459 39.1-126.1 -91.2 169.0 5.3 0.9 -13.6 153 235 A S > - 0 0 18 -2,-0.1 4,-1.4 1,-0.1 -17,-0.1 -0.315 30.0 -97.8-101.9-169.9 9.0 0.1 -13.0 154 236 A Q H > S+ 0 0 119 2,-0.2 4,-0.8 3,-0.2 -22,-0.1 0.650 119.5 57.2 -85.3 -12.7 11.1 -3.0 -13.9 155 237 A D H > S+ 0 0 55 -24,-0.4 4,-2.8 2,-0.2 5,-0.2 0.936 111.2 38.6 -84.7 -47.8 10.6 -4.5 -10.5 156 238 A D H > S+ 0 0 0 -25,-0.4 4,-2.8 1,-0.2 5,-0.4 0.942 115.6 55.1 -66.7 -37.0 6.8 -4.6 -10.6 157 239 A I H X S+ 0 0 31 -4,-1.4 4,-2.4 1,-0.2 -1,-0.2 0.900 108.5 50.6 -58.0 -35.1 7.2 -5.5 -14.2 158 240 A N H X S+ 0 0 83 -4,-0.8 4,-2.0 2,-0.2 -2,-0.2 0.964 109.7 47.8 -67.9 -50.8 9.3 -8.3 -12.9 159 241 A G H X S+ 0 0 3 -4,-2.8 4,-1.0 2,-0.2 -2,-0.2 0.972 118.8 39.2 -55.9 -55.1 6.7 -9.5 -10.3 160 242 A I H >X S+ 0 0 1 -4,-2.8 4,-1.9 1,-0.3 3,-1.3 0.950 111.3 57.4 -63.4 -43.4 3.9 -9.5 -12.8 161 243 A Q H 3< S+ 0 0 93 -4,-2.4 -1,-0.3 -5,-0.4 -2,-0.2 0.886 106.4 51.6 -54.1 -31.3 6.1 -10.9 -15.5 162 244 A S H 3< S+ 0 0 65 -4,-2.0 -1,-0.3 -3,-0.2 -2,-0.2 0.777 104.2 60.0 -75.5 -22.3 6.6 -13.7 -13.0 163 245 A L H << S- 0 0 14 -3,-1.3 -2,-0.2 -4,-1.0 -1,-0.1 0.998 129.7 -6.3 -66.8 -64.6 2.8 -13.9 -12.8 164 246 A Y S < S+ 0 0 75 -4,-1.9 -118,-0.1 -38,-0.1 -3,-0.1 0.483 81.2 160.7-100.3-115.7 2.3 -14.7 -16.5 165 247 A G - 0 0 10 2,-0.0 -3,-0.1 0, 0.0 -119,-0.0 -0.631 47.9 -32.1 121.1 177.1 5.3 -14.7 -19.0 166 248 A P - 0 0 111 0, 0.0 -118,-0.0 0, 0.0 -120,-0.0 -0.417 68.1-104.8 -72.2 146.1 6.1 -16.2 -22.4 167 249 A P - 0 0 95 0, 0.0 -3,-0.0 0, 0.0 -2,-0.0 -0.451 18.8-145.4 -72.7 142.7 4.5 -19.5 -23.4 168 250 A P - 0 0 119 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.973 61.7 -68.3 -73.5 -59.2 6.8 -22.6 -23.3 169 251 A D S S+ 0 0 144 1,-0.3 3,-0.0 3,-0.0 0, 0.0 0.157 102.1 98.0-161.7 -65.0 5.3 -24.5 -26.3 170 252 A S - 0 0 80 1,-0.2 -1,-0.3 3,-0.1 3,-0.0 -0.185 49.6-168.7 -44.7 105.3 1.8 -25.9 -25.8 171 253 A P + 0 0 122 0, 0.0 2,-0.3 0, 0.0 -1,-0.2 0.743 69.8 11.9 -72.5 -24.3 -0.2 -23.1 -27.6 172 254 A E 0 0 140 -3,-0.0 -3,-0.0 0, 0.0 0, 0.0 -0.923 360.0 360.0-145.5 171.1 -3.5 -24.6 -26.2 173 255 A T 0 0 187 -2,-0.3 -3,-0.1 -3,-0.0 0, 0.0 0.663 360.0 360.0 -49.8 360.0 -4.7 -27.1 -23.7 174 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 175 1 A X 0 0 89 0, 0.0 -91,-0.2 0, 0.0 -94,-0.0 0.000 360.0 360.0 360.0 360.0 -2.5 -0.4 0.4