==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOME 13-DEC-07 3BN0 . COMPND 2 MOLECULE: 30S RIBOSOMAL PROTEIN S16; . SOURCE 2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS; . AUTHOR O.PYLYPENKO,A.RAK . 95 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6171.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 68 71.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 3 3.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 34 35.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 18.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A A 0 0 68 0, 0.0 23,-1.8 0, 0.0 2,-0.5 0.000 360.0 360.0 360.0 167.6 -19.5 -25.3 30.6 2 3 A V E +A 23 0A 46 21,-0.2 56,-0.8 19,-0.1 2,-0.3 -0.720 360.0 170.8 -74.4 123.1 -16.6 -25.5 27.9 3 4 A R E -Ab 22 58A 58 19,-3.1 19,-2.2 -2,-0.5 2,-0.6 -0.956 39.5-120.2-136.7 158.6 -14.0 -23.0 29.1 4 5 A I E +Ab 21 59A 0 54,-3.3 56,-2.4 -2,-0.3 2,-0.3 -0.875 54.5 140.7 -95.3 121.5 -10.4 -21.9 28.3 5 6 A R E -A 20 0A 110 15,-2.1 15,-3.0 -2,-0.6 2,-0.3 -0.873 49.2 -85.1-149.3-178.8 -8.2 -22.4 31.4 6 7 A L E -A 19 0A 38 -2,-0.3 2,-0.4 13,-0.2 13,-0.2 -0.758 30.7-166.6 -99.5 142.6 -4.8 -23.5 32.8 7 8 A A E -A 18 0A 11 11,-2.0 11,-2.4 -2,-0.3 2,-0.0 -0.996 28.1-107.4-127.9 137.8 -3.8 -27.0 33.5 8 9 A K E +A 17 0A 158 -2,-0.4 2,-0.3 9,-0.2 9,-0.2 -0.310 44.5 158.3 -68.0 146.3 -0.7 -28.1 35.5 9 10 A F E +A 16 0A 92 7,-2.1 7,-2.6 2,-0.1 2,-0.2 -0.945 42.7 23.2-163.2 150.1 2.2 -29.7 33.6 10 11 A G E S-A 15 0A 60 -2,-0.3 2,-0.3 5,-0.2 -2,-0.0 -0.543 82.4 -51.3 84.7-149.7 6.0 -30.0 34.7 11 12 A R E > -A 14 0A 175 3,-2.1 3,-2.1 -2,-0.2 -2,-0.1 -0.870 52.2 -71.3-139.3 158.9 7.7 -29.9 38.1 12 13 A K T 3 S+ 0 0 169 -2,-0.3 -1,-0.1 1,-0.3 -2,-0.0 -0.240 121.2 14.0 -46.0 132.7 8.3 -28.3 41.5 13 14 A H T 3 S+ 0 0 134 1,-0.0 -1,-0.3 24,-0.0 24,-0.0 0.207 131.7 57.0 73.5 -14.0 10.4 -25.1 41.1 14 15 A H E < S+A 11 0A 108 -3,-2.1 -3,-2.1 2,-0.0 2,-0.1 -0.532 74.5 179.2-138.4 71.4 9.6 -25.2 37.4 15 16 A P E -A 10 0A 32 0, 0.0 22,-0.4 0, 0.0 2,-0.4 -0.450 7.6-164.4 -71.2 147.3 5.8 -25.3 37.0 16 17 A I E -A 9 0A 29 -7,-2.6 -7,-2.1 19,-0.1 2,-0.5 -0.996 2.2-157.1-132.0 139.1 4.4 -25.4 33.5 17 18 A Y E -AC 8 34A 39 17,-2.4 17,-2.4 -2,-0.4 2,-0.4 -0.967 6.0-150.7-120.4 120.4 0.7 -24.6 32.4 18 19 A R E -AC 7 33A 56 -11,-2.4 -11,-2.0 -2,-0.5 2,-0.7 -0.708 18.7-134.9 -78.6 133.3 -1.0 -25.8 29.3 19 20 A I E +AC 6 32A 0 13,-2.6 12,-3.3 -2,-0.4 13,-1.0 -0.854 42.3 178.6 -85.3 116.9 -3.7 -23.4 28.1 20 21 A V E -AC 5 30A 0 -15,-3.0 -15,-2.1 -2,-0.7 2,-0.5 -0.796 38.7-132.2-122.3 160.3 -6.5 -25.8 27.4 21 22 A V E +AC 4 29A 0 8,-2.6 7,-2.2 -2,-0.3 8,-1.2 -0.975 47.5 155.5-104.4 122.9 -10.1 -26.0 26.2 22 23 A M E -A 3 0A 43 -19,-2.2 -19,-3.1 -2,-0.5 2,-0.5 -0.969 44.9-120.6-146.2 158.9 -12.0 -28.2 28.6 23 24 A D E A 2 0A 103 -2,-0.3 -21,-0.2 -21,-0.3 -2,-0.0 -0.946 360.0 360.0-107.2 128.4 -15.5 -29.0 30.0 24 25 A A 0 0 87 -23,-1.8 -1,-0.1 -2,-0.5 -22,-0.0 0.221 360.0 360.0 -64.1 360.0 -15.8 -28.6 33.8 25 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 26 32 A K 0 0 188 0, 0.0 2,-0.3 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0-125.4 -8.0 -35.2 28.5 27 33 A Y - 0 0 63 -5,-0.1 -5,-0.2 1,-0.1 3,-0.1 -0.913 360.0-122.3-144.9 155.2 -9.0 -31.9 26.9 28 34 A I S S- 0 0 83 -7,-2.2 2,-0.3 -2,-0.3 -6,-0.2 0.865 92.7 -15.6 -71.3 -37.7 -11.0 -30.7 23.9 29 35 A D E -C 21 0A 23 -8,-1.2 -8,-2.6 -3,-0.0 2,-0.5 -0.982 57.2-129.9-162.1 155.5 -8.0 -28.7 22.5 30 36 A I E -C 20 0A 35 -2,-0.3 -10,-0.2 -10,-0.2 3,-0.1 -0.972 14.9-175.4-113.7 129.3 -4.6 -27.3 23.6 31 37 A L E - 0 0 0 -12,-3.3 14,-2.4 -2,-0.5 2,-0.3 0.536 59.8 -59.7 -98.8 -11.4 -4.1 -23.6 22.8 32 38 A G E -CD 19 44A 0 -13,-1.0 -13,-2.6 12,-0.3 2,-0.4 -0.909 48.1 -88.2 153.5-178.6 -0.4 -23.5 23.9 33 39 A T E -CD 18 43A 11 10,-3.0 9,-1.6 -2,-0.3 10,-0.9 -0.985 33.3-164.1-134.8 131.8 2.1 -23.9 26.7 34 40 A Y E -CD 17 41A 16 -17,-2.4 -17,-2.4 -2,-0.4 7,-0.2 -0.950 14.9-154.7-129.9 138.8 3.2 -21.3 29.2 35 41 A D E >> - D 0 40A 26 5,-2.5 5,-1.2 -2,-0.4 4,-1.1 -0.938 7.7-167.8-114.5 110.9 6.1 -20.9 31.6 36 42 A P T 45S+ 0 0 19 0, 0.0 -1,-0.1 0, 0.0 -20,-0.1 0.746 83.0 52.1 -75.6 -24.8 5.2 -18.6 34.5 37 43 A K T 45S+ 0 0 140 -22,-0.4 -21,-0.1 1,-0.1 -23,-0.0 0.954 122.6 28.1 -74.9 -53.0 8.7 -18.1 35.8 38 44 A R T 45S- 0 0 200 2,-0.1 -1,-0.1 0, 0.0 3,-0.1 0.624 102.8-134.9 -83.8 -12.4 10.4 -17.1 32.6 39 45 A K T <5 + 0 0 142 -4,-1.1 2,-0.4 1,-0.2 -2,-0.0 0.915 57.1 131.4 59.9 47.2 7.1 -15.7 31.3 40 46 A V E < -D 35 0A 67 -5,-1.2 -5,-2.5 3,-0.0 2,-0.8 -0.955 60.9-123.3-127.3 151.9 7.3 -17.2 27.9 41 47 A L E -D 34 0A 36 -2,-0.4 -7,-0.2 -7,-0.2 3,-0.1 -0.861 19.9-171.8 -92.0 112.1 5.0 -19.1 25.7 42 48 A I E S+ 0 0 93 -9,-1.6 2,-0.3 -2,-0.8 -1,-0.2 0.950 77.0 5.6 -62.4 -55.9 6.8 -22.4 24.8 43 49 A N E +D 33 0A 66 -10,-0.9 -10,-3.0 -3,-0.1 2,-0.3 -0.972 66.7 177.2-127.4 146.1 4.1 -23.3 22.3 44 50 A V E -D 32 0A 43 -2,-0.3 -12,-0.3 -12,-0.3 -13,-0.1 -0.983 15.6-160.1-142.4 143.3 1.1 -21.3 21.0 45 51 A Y >> - 0 0 86 -14,-2.4 4,-1.5 -2,-0.3 3,-0.8 -0.787 10.1-177.2-122.4 86.4 -1.5 -22.4 18.4 46 52 A P H 3> S+ 0 0 35 0, 0.0 4,-2.0 0, 0.0 5,-0.2 0.716 79.6 58.7 -62.6 -26.2 -3.1 -19.1 17.2 47 53 A E H 3> S+ 0 0 119 1,-0.2 4,-1.9 2,-0.2 5,-0.1 0.882 107.7 48.7 -68.5 -37.8 -5.6 -20.8 14.8 48 54 A K H <> S+ 0 0 63 -3,-0.8 4,-2.1 2,-0.2 5,-0.2 0.858 111.1 49.1 -66.4 -38.6 -6.9 -22.7 17.7 49 55 A V H X S+ 0 0 0 -4,-1.5 4,-2.0 2,-0.2 5,-0.3 0.843 109.7 51.1 -74.3 -31.3 -7.3 -19.6 19.9 50 56 A K H X S+ 0 0 100 -4,-2.0 4,-2.2 2,-0.2 5,-0.2 0.969 111.4 49.7 -63.4 -50.3 -9.1 -17.6 17.2 51 57 A E H X S+ 0 0 83 -4,-1.9 4,-1.0 1,-0.2 -2,-0.2 0.939 117.6 36.5 -51.9 -59.3 -11.5 -20.5 16.8 52 58 A W H <>S+ 0 0 33 -4,-2.1 5,-1.4 1,-0.2 3,-0.3 0.892 116.4 49.5 -70.8 -43.5 -12.4 -20.9 20.4 53 59 A V H ><5S+ 0 0 0 -4,-2.0 3,-1.3 1,-0.2 39,-0.6 0.854 110.9 50.7 -61.1 -40.2 -12.4 -17.3 21.6 54 60 A L H 3<5S+ 0 0 39 -4,-2.2 -1,-0.2 -5,-0.3 -2,-0.2 0.721 98.4 69.0 -76.3 -17.5 -14.6 -16.2 18.7 55 61 A K T 3<5S- 0 0 119 -4,-1.0 -1,-0.3 -3,-0.3 -2,-0.2 0.474 117.4-112.5 -69.7 -4.7 -17.0 -19.1 19.7 56 62 A G T < 5 + 0 0 31 -3,-1.3 -3,-0.2 1,-0.2 -2,-0.1 0.597 60.1 161.2 82.4 10.4 -17.8 -17.1 22.9 57 63 A V < - 0 0 18 -5,-1.4 35,-0.4 1,-0.1 2,-0.3 -0.344 44.5-107.8 -66.5 143.9 -16.1 -19.6 25.2 58 64 A E E -b 3 0A 41 -56,-0.8 -54,-3.3 33,-0.1 2,-0.4 -0.612 29.6-151.4 -78.6 135.7 -15.2 -18.2 28.6 59 65 A L E -bE 4 90A 0 31,-3.2 31,-1.7 -2,-0.3 -54,-0.2 -0.891 15.8-122.7-103.4 135.4 -11.6 -17.5 29.4 60 66 A S E > - E 0 89A 23 -56,-2.4 4,-2.3 -2,-0.4 5,-0.2 -0.238 34.9-104.5 -62.7 160.6 -10.1 -17.7 33.0 61 67 A H H > S+ 0 0 98 27,-0.6 4,-2.4 1,-0.2 -1,-0.1 0.922 119.6 43.1 -56.4 -46.8 -8.4 -14.4 34.1 62 68 A R H > S+ 0 0 107 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.837 111.0 53.3 -76.2 -33.9 -4.9 -15.8 33.7 63 69 A A H > S+ 0 0 0 2,-0.2 4,-2.1 -59,-0.2 -1,-0.2 0.920 112.3 47.4 -61.3 -43.2 -5.5 -17.5 30.3 64 70 A K H X S+ 0 0 32 -4,-2.3 4,-2.7 2,-0.2 5,-0.2 0.938 110.9 51.7 -58.1 -49.6 -6.8 -14.1 29.1 65 71 A A H X S+ 0 0 23 -4,-2.4 4,-2.8 1,-0.2 5,-0.3 0.905 111.3 46.4 -57.1 -47.9 -3.8 -12.3 30.6 66 72 A I H X S+ 0 0 5 -4,-2.3 4,-2.0 1,-0.2 6,-0.3 0.947 116.9 42.8 -57.7 -51.0 -1.3 -14.6 28.9 67 73 A L H <>S+ 0 0 0 -4,-2.1 6,-1.9 -5,-0.2 5,-1.5 0.840 118.7 44.9 -72.8 -31.4 -3.0 -14.4 25.5 68 74 A W H ><5S+ 0 0 130 -4,-2.7 3,-1.7 -5,-0.2 6,-0.3 0.956 115.7 44.5 -72.9 -54.5 -3.6 -10.7 25.7 69 75 A N H 3<5S+ 0 0 126 -4,-2.8 -2,-0.2 1,-0.3 -3,-0.2 0.788 110.9 53.7 -62.2 -33.1 -0.1 -9.7 27.0 70 76 A H T 3<5S- 0 0 75 -4,-2.0 -1,-0.3 -5,-0.3 -2,-0.1 0.249 115.4-117.7 -85.8 13.2 1.7 -11.9 24.5 71 77 A G T <>5S+ 0 0 28 -3,-1.7 4,-1.5 1,-0.1 -3,-0.2 0.593 79.6 124.6 62.3 15.5 -0.3 -10.2 21.7 72 78 A I H > S+ 0 0 4 -6,-1.9 4,-3.1 1,-0.2 3,-0.5 0.919 108.4 56.0 -66.4 -42.8 -5.5 -11.9 21.1 74 80 A K H 4 S+ 0 0 191 -7,-0.3 -1,-0.2 -6,-0.3 -2,-0.2 0.866 108.7 47.4 -57.1 -40.2 -4.5 -8.8 19.1 75 81 A E H < S+ 0 0 131 -4,-1.5 -1,-0.2 1,-0.1 -2,-0.2 0.767 123.9 29.7 -73.9 -24.9 -3.4 -10.8 16.1 76 82 A V H < S+ 0 0 14 -4,-1.1 -2,-0.2 -3,-0.5 -3,-0.2 0.737 95.9 83.6-111.7 -26.5 -6.6 -13.0 16.0 77 83 A V < - 0 0 26 -4,-3.1 -1,-0.1 -5,-0.2 3,-0.1 -0.750 68.4-143.1 -88.8 112.6 -9.6 -11.1 17.3 78 84 A P > - 0 0 54 0, 0.0 3,-1.2 0, 0.0 2,-0.1 -0.287 26.6 -96.1 -63.5 152.4 -11.3 -8.8 14.6 79 85 A E T 3 S+ 0 0 106 1,-0.2 3,-0.1 15,-0.0 15,-0.0 -0.455 112.5 56.2 -62.8 145.3 -12.8 -5.4 15.4 80 86 A G T 3 S+ 0 0 37 1,-0.4 15,-3.8 -2,-0.1 2,-0.4 0.214 90.5 93.4 102.1 -13.0 -16.5 -5.9 15.9 81 87 A Y E < -F 94 0A 82 -3,-1.2 -1,-0.4 13,-0.3 2,-0.3 -0.962 61.2-165.4-108.1 132.4 -15.7 -8.4 18.6 82 88 A E E -F 93 0A 40 11,-3.2 11,-2.3 -2,-0.4 2,-0.5 -0.898 18.7-124.9-118.1 146.3 -15.6 -6.9 22.2 83 89 A M E -F 92 0A 60 -2,-0.3 2,-0.4 9,-0.2 9,-0.3 -0.799 28.6-167.0 -87.8 128.9 -14.1 -8.5 25.3 84 90 A K E -F 91 0A 91 7,-3.8 7,-2.3 -2,-0.5 2,-0.6 -0.925 18.9-133.0-115.9 142.5 -16.6 -8.6 28.2 85 91 A R E +F 90 0A 180 -2,-0.4 2,-0.5 5,-0.2 5,-0.2 -0.853 27.6 178.3 -91.6 119.5 -15.9 -9.3 31.9 86 92 A V E > -F 89 0A 72 3,-2.4 3,-2.4 -2,-0.6 2,-0.3 -0.881 53.5 -68.8-129.1 98.9 -18.4 -11.9 33.2 87 93 A G T 3 S- 0 0 70 -2,-0.5 -1,-0.0 1,-0.3 0, 0.0 -0.420 118.6 -9.0 57.0-119.5 -17.9 -12.9 36.9 88 94 A D T 3 S+ 0 0 134 -2,-0.3 -27,-0.6 -3,-0.1 -1,-0.3 0.503 131.5 63.4 -81.7 -7.2 -14.7 -14.9 37.1 89 95 A Y E < -EF 60 86A 58 -3,-2.4 -3,-2.4 -29,-0.1 2,-0.3 -0.548 66.9-135.4-119.3 174.4 -14.3 -15.1 33.3 90 96 A Y E -EF 59 85A 13 -31,-1.7 -31,-3.2 -5,-0.2 2,-0.3 -0.978 20.2-172.9-128.7 144.9 -13.9 -13.1 30.1 91 97 A V E - F 0 84A 14 -7,-2.3 -7,-3.8 -2,-0.3 2,-0.5 -0.986 16.7-143.5-136.9 144.9 -15.8 -13.5 26.8 92 98 A F E + F 0 83A 8 -39,-0.6 2,-0.3 -35,-0.4 -9,-0.2 -0.930 32.1 161.6-106.1 132.2 -15.4 -12.1 23.3 93 99 A E E - F 0 82A 70 -11,-2.3 -11,-3.2 -2,-0.5 -13,-0.1 -0.982 43.5 -78.6-147.4 159.3 -18.7 -11.4 21.4 94 100 A K E - F 0 81A 123 -2,-0.3 -13,-0.3 -13,-0.2 -14,-0.0 -0.293 29.8-138.0 -60.7 134.1 -19.9 -9.3 18.5 95 101 A R 0 0 167 -15,-3.8 -1,-0.1 1,-0.2 -14,-0.1 0.986 360.0 360.0 -51.0 -67.9 -20.5 -5.6 19.1 96 102 A E 0 0 133 -16,-0.2 -1,-0.2 -3,-0.0 -3,-0.0 -0.904 360.0 360.0-171.0 360.0 -23.8 -5.7 17.1