==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER INSULIN-LIKE BRAIN-SECRETORY PEPTIDE 21-JUL-94 1BOM . COMPND 2 MOLECULE: BOMBYXIN-II,BOMBYXIN A-2; . SOURCE 2 ORGANISM_SCIENTIFIC: BOMBYX MORI; . AUTHOR K.NAGATA,H.HATANAKA,D.KOHDA,F.INAGAKI . 48 2 3 1 2 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4038.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 22 45.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 12.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 84 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 101.7 -1.4 3.7 -12.2 2 2 A I >> + 0 0 31 1,-0.1 4,-1.6 2,-0.1 3,-0.7 0.626 360.0 68.1 -90.6 -13.4 1.2 2.1 -9.9 3 3 A V H 3>>S+ 0 0 49 1,-0.2 4,-2.7 2,-0.2 5,-0.7 0.940 95.9 50.3 -72.0 -47.0 -0.4 3.8 -6.8 4 4 A D H 345S+ 0 0 81 1,-0.2 -1,-0.2 3,-0.2 -2,-0.1 0.336 111.9 54.8 -74.3 12.4 -3.7 1.9 -6.9 5 5 A E H <>5S+ 0 0 60 -3,-0.7 4,-0.7 3,-0.1 -1,-0.2 0.727 119.2 24.6-110.6 -40.1 -1.5 -1.2 -7.1 6 6 A a H <5S+ 0 0 1 -4,-1.6 -2,-0.2 -3,-0.2 -3,-0.2 0.804 125.8 48.4 -94.7 -34.7 0.8 -0.7 -4.1 7 7 A b T <5S+ 0 0 53 -4,-2.7 -3,-0.2 -5,-0.3 24,-0.1 0.960 123.6 32.9 -68.0 -50.0 -1.5 1.5 -2.0 8 8 A L T 4> + 0 0 3 -5,-0.1 4,-0.6 -4,-0.0 5,-0.6 0.109 17.6 176.9-178.3 17.1 3.5 -5.0 -4.9 12 12 A S T >45 - 0 0 73 3,-0.2 3,-1.4 2,-0.2 4,-0.4 -0.020 57.0 -79.1 -37.4 139.7 6.6 -5.8 -2.9 13 13 A V T 3>5S+ 0 0 64 1,-0.3 4,-3.0 2,-0.2 3,-0.4 0.614 131.2 70.1 -11.8 -51.0 9.8 -5.5 -5.0 14 14 A D T 345S+ 0 0 144 1,-0.3 -1,-0.3 2,-0.2 -2,-0.2 0.432 111.3 34.7 -61.3 11.7 9.1 -8.8 -6.7 15 15 A V T <<5S+ 0 0 64 -3,-1.4 -1,-0.3 -4,-0.6 -2,-0.2 0.510 117.7 47.9-133.2 -27.4 6.2 -6.9 -8.3 16 16 A L T >>> S+ 0 0 198 1,-0.3 3,-1.9 -3,-0.1 4,-1.6 -0.239 114.9 71.4 58.5 -72.2 4.7 10.4 -5.5 34 10 B H T 34 S+ 0 0 94 -2,-3.3 4,-0.4 1,-0.3 -1,-0.3 0.707 100.8 50.7 -46.5 -14.8 6.2 7.9 -3.2 35 11 B L T 3> S+ 0 0 4 2,-0.2 4,-1.6 1,-0.1 -1,-0.3 0.737 101.9 56.5 -95.3 -27.4 5.7 5.7 -6.3 36 12 B A T <4 S+ 0 0 82 -3,-1.9 -2,-0.2 1,-0.2 -1,-0.1 0.660 111.7 46.4 -76.7 -11.8 7.4 8.0 -8.7 37 13 B R T >< S+ 0 0 169 -4,-1.6 3,-0.6 2,-0.1 4,-0.5 0.677 104.3 63.1 -97.0 -24.9 10.4 7.7 -6.5 38 14 B T G >> S+ 0 0 26 -4,-0.4 4,-2.2 -5,-0.4 3,-1.8 0.970 103.4 44.4 -65.6 -54.8 10.1 4.0 -6.2 39 15 B L G 3< S+ 0 0 43 -4,-1.6 -1,-0.2 1,-0.3 4,-0.2 0.375 110.8 59.9 -73.2 9.2 10.7 3.2 -9.8 40 16 B A G <4 S+ 0 0 40 -3,-0.6 -1,-0.3 2,-0.1 -2,-0.2 0.509 110.5 38.0-107.5 -15.1 13.5 5.7 -9.6 41 17 B D T <> S+ 0 0 81 -3,-1.8 4,-1.1 -4,-0.5 -2,-0.2 0.613 120.1 46.5-106.1 -24.5 15.3 3.8 -7.0 42 18 B L H X S+ 0 0 24 -4,-2.2 4,-3.2 2,-0.3 3,-0.4 0.930 109.6 49.3 -84.5 -51.2 14.5 0.4 -8.4 43 19 B c H 4 S+ 0 0 59 1,-0.3 -1,-0.2 -5,-0.2 -3,-0.1 0.734 114.7 54.1 -58.6 -13.8 15.4 1.0 -12.0 44 20 B W H > S+ 0 0 153 2,-0.2 4,-1.0 1,-0.1 3,-0.3 0.830 111.9 38.1 -86.7 -38.1 18.4 2.4 -10.2 45 21 B E H < S+ 0 0 158 -4,-1.1 -2,-0.2 -3,-0.4 -3,-0.2 0.666 107.0 66.4 -87.7 -15.3 19.2 -0.8 -8.2 46 22 B A T < S- 0 0 73 -4,-3.2 -1,-0.2 1,-0.2 -3,-0.2 0.636 138.8 -42.1 -77.2 -12.4 18.2 -3.0 -11.2 47 23 B G T 4 - 0 0 26 -3,-0.3 -2,-0.2 -5,-0.3 -1,-0.2 0.216 47.7-151.0 147.0 80.9 21.3 -1.5 -12.9 48 24 B V < 0 0 83 -4,-1.0 -3,-0.1 1,-0.3 -4,-0.1 0.719 360.0 360.0 -43.3 -17.5 22.1 2.2 -12.6 49 25 B D 0 0 213 -5,-0.1 -1,-0.3 0, 0.0 -5,-0.1 0.699 360.0 360.0 -56.9 360.0 23.6 1.6 -16.0