==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS,UNKNOWN FUNCTION 07-APR-05 2BO3 . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN HP0242; . SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; . AUTHOR Y.-J.SUN,J.-Y.TSAI,B.-T.CHEN . 90 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8447.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 69 76.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 60 66.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 206 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-172.9 2.7 25.9 73.3 2 2 A R - 0 0 192 2,-0.0 2,-0.6 0, 0.0 0, 0.0 -0.951 360.0 -79.2-173.6 165.6 2.8 25.1 77.0 3 3 A D - 0 0 154 -2,-0.3 2,-1.2 1,-0.1 0, 0.0 -0.715 33.3-151.9 -86.2 122.4 1.0 22.7 79.4 4 4 A Y 0 0 179 -2,-0.6 -1,-0.1 1,-0.1 -2,-0.0 -0.608 360.0 360.0 -94.8 77.6 -2.4 24.0 80.5 5 5 A S 0 0 154 -2,-1.2 -1,-0.1 2,-0.0 -2,-0.1 -0.437 360.0 360.0-142.8 360.0 -2.8 22.5 84.0 6 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 7 8 A E 0 0 132 0, 0.0 -3,-0.0 0, 0.0 -2,-0.0 0.000 360.0 360.0 360.0 29.5 -6.3 28.8 86.1 8 9 A I + 0 0 141 3,-0.1 2,-0.2 0, 0.0 3,-0.1 0.914 360.0 63.7 -61.9 -44.8 -8.4 31.3 84.1 9 10 A F S S+ 0 0 168 1,-0.2 0, 0.0 2,-0.0 0, 0.0 -0.506 103.0 25.0 -79.8 149.2 -11.6 30.0 85.6 10 11 A E S S+ 0 0 192 -2,-0.2 2,-0.3 1,-0.2 -1,-0.2 0.989 82.0 169.8 59.4 77.8 -12.2 30.4 89.3 11 12 A G - 0 0 58 -3,-0.1 -1,-0.2 4,-0.0 -3,-0.1 -0.900 26.1-153.2-120.8 151.6 -10.0 33.3 90.1 12 13 A N >> - 0 0 77 -2,-0.3 4,-1.2 1,-0.1 3,-0.8 -0.902 2.6-163.1-131.8 107.2 -9.6 35.4 93.3 13 14 A P H 3> S+ 0 0 65 0, 0.0 4,-1.6 0, 0.0 -1,-0.1 0.801 91.0 52.7 -50.0 -42.5 -8.4 39.0 93.1 14 15 A L H 3> S+ 0 0 70 1,-0.2 4,-2.0 2,-0.2 5,-0.1 0.785 102.9 56.6 -71.6 -29.7 -7.6 39.3 96.8 15 16 A D H <> S+ 0 0 90 -3,-0.8 4,-2.0 2,-0.2 -1,-0.2 0.853 109.1 47.4 -71.0 -32.0 -5.4 36.2 96.8 16 17 A K H X S+ 0 0 110 -4,-1.2 4,-2.5 2,-0.2 5,-0.2 0.836 108.5 54.3 -75.1 -36.6 -3.2 37.7 94.1 17 18 A W H X S+ 0 0 69 -4,-1.6 4,-2.7 1,-0.2 -2,-0.2 0.938 110.2 47.9 -61.9 -43.9 -3.0 41.0 95.9 18 19 A N H X S+ 0 0 77 -4,-2.0 4,-2.7 2,-0.2 -2,-0.2 0.932 110.8 49.7 -61.3 -47.1 -1.8 39.0 99.0 19 20 A D H X S+ 0 0 66 -4,-2.0 4,-1.4 1,-0.2 5,-0.2 0.927 114.1 46.4 -57.1 -47.3 0.8 37.0 97.0 20 21 A I H X S+ 0 0 63 -4,-2.5 4,-1.8 2,-0.2 3,-0.2 0.910 111.9 50.1 -63.2 -44.6 2.1 40.2 95.4 21 22 A I H < S+ 0 0 8 -4,-2.7 -2,-0.2 -5,-0.2 -1,-0.2 0.913 118.3 39.0 -62.3 -41.0 2.2 42.0 98.8 22 23 A F H < S+ 0 0 118 -4,-2.7 -1,-0.2 1,-0.2 -2,-0.2 0.575 120.5 43.3 -87.3 -9.6 4.2 39.2 100.4 23 24 A H H < S+ 0 0 153 -4,-1.4 -2,-0.2 -3,-0.2 -3,-0.2 0.612 94.8 89.0-109.8 -15.8 6.5 38.3 97.5 24 25 A A S < S- 0 0 24 -4,-1.8 5,-0.0 -5,-0.2 64,-0.0 -0.233 100.2 -61.6 -75.4 171.6 7.5 41.7 96.3 25 26 A S >> - 0 0 63 1,-0.2 4,-2.5 63,-0.1 3,-0.5 -0.295 46.1-130.8 -52.1 130.4 10.5 43.6 97.6 26 27 A K H 3> S+ 0 0 139 1,-0.2 4,-1.0 2,-0.2 -1,-0.2 0.682 108.5 58.3 -60.0 -19.2 9.9 44.2 101.4 27 28 A K H 3> S+ 0 0 165 2,-0.2 4,-1.7 3,-0.1 -1,-0.2 0.888 109.9 40.4 -76.6 -42.6 10.8 47.8 100.7 28 29 A L H <> S+ 0 0 41 -3,-0.5 4,-2.1 2,-0.2 -2,-0.2 0.863 114.6 49.9 -74.9 -40.8 8.0 48.3 98.1 29 30 A S H X S+ 0 0 11 -4,-2.5 4,-2.1 2,-0.2 5,-0.2 0.875 111.6 51.4 -68.0 -35.2 5.3 46.3 100.0 30 31 A K H X S+ 0 0 119 -4,-1.0 4,-2.0 -5,-0.3 -2,-0.2 0.935 110.3 47.5 -66.4 -45.6 6.1 48.3 103.1 31 32 A K H X S+ 0 0 146 -4,-1.7 4,-1.8 1,-0.2 -2,-0.2 0.891 113.7 48.3 -61.3 -40.8 5.8 51.7 101.3 32 33 A E H X S+ 0 0 7 -4,-2.1 4,-2.0 1,-0.2 -1,-0.2 0.869 111.0 50.2 -68.9 -38.3 2.5 50.6 99.7 33 34 A L H X S+ 0 0 76 -4,-2.1 4,-2.1 2,-0.2 -1,-0.2 0.862 110.1 49.6 -69.3 -35.8 1.1 49.4 103.0 34 35 A E H X S+ 0 0 95 -4,-2.0 4,-2.3 2,-0.2 -2,-0.2 0.878 108.1 55.0 -70.9 -34.4 2.0 52.7 104.7 35 36 A R H X S+ 0 0 86 -4,-1.8 4,-2.1 2,-0.2 -2,-0.2 0.938 110.6 44.8 -60.4 -50.6 0.3 54.6 101.8 36 37 A L H X S+ 0 0 39 -4,-2.0 4,-2.5 1,-0.2 -2,-0.2 0.885 112.8 51.3 -61.9 -42.0 -2.9 52.6 102.4 37 38 A L H X S+ 0 0 119 -4,-2.1 4,-2.4 1,-0.2 -1,-0.2 0.879 111.9 46.7 -62.9 -40.7 -2.7 53.1 106.2 38 39 A E H X S+ 0 0 135 -4,-2.3 4,-2.0 2,-0.2 -2,-0.2 0.855 111.8 50.8 -72.2 -34.9 -2.2 56.9 105.8 39 40 A L H X S+ 0 0 76 -4,-2.1 4,-3.0 2,-0.2 5,-0.2 0.937 110.7 49.1 -67.4 -46.3 -5.1 57.2 103.3 40 41 A L H X S+ 0 0 95 -4,-2.5 4,-2.6 1,-0.2 5,-0.2 0.940 110.6 49.8 -57.1 -50.2 -7.3 55.3 105.7 41 42 A A H X S+ 0 0 46 -4,-2.4 4,-2.5 1,-0.2 -1,-0.2 0.893 112.5 50.3 -56.2 -38.7 -6.3 57.6 108.6 42 43 A L H X S+ 0 0 106 -4,-2.0 4,-2.6 1,-0.2 -2,-0.2 0.956 111.4 45.7 -64.1 -51.3 -7.1 60.5 106.3 43 44 A L H X S+ 0 0 97 -4,-3.0 4,-2.0 2,-0.2 -2,-0.2 0.861 114.5 48.6 -60.5 -38.8 -10.5 59.3 105.3 44 45 A E H X S+ 0 0 115 -4,-2.6 4,-1.6 -5,-0.2 -2,-0.2 0.966 112.9 46.8 -67.3 -50.0 -11.4 58.5 108.9 45 46 A T H X S+ 0 0 84 -4,-2.5 4,-2.6 -5,-0.2 5,-0.2 0.853 111.2 52.8 -58.5 -39.9 -10.3 61.9 110.1 46 47 A F H X S+ 0 0 110 -4,-2.6 4,-2.0 1,-0.2 -1,-0.2 0.926 106.4 52.2 -62.7 -46.3 -12.2 63.6 107.3 47 48 A I H <>S+ 0 0 38 -4,-2.0 5,-3.6 1,-0.2 6,-0.6 0.846 112.7 47.1 -59.3 -33.4 -15.4 61.8 108.1 48 49 A E H ><5S+ 0 0 107 -4,-1.6 3,-1.6 3,-0.2 -2,-0.2 0.927 110.4 48.0 -75.4 -46.6 -15.0 63.0 111.7 49 50 A K H 3<5S+ 0 0 132 -4,-2.6 -2,-0.2 1,-0.3 -1,-0.2 0.816 114.6 48.6 -64.8 -25.9 -14.2 66.7 111.0 50 51 A E T 3<5S- 0 0 84 -4,-2.0 -1,-0.3 -5,-0.2 -2,-0.2 0.427 110.9-131.7 -88.4 -2.1 -17.2 66.6 108.7 51 52 A D T < 5 + 0 0 126 -3,-1.6 -3,-0.2 -5,-0.2 3,-0.2 0.879 67.4 131.8 49.7 46.0 -19.1 65.0 111.5 52 53 A L >< + 0 0 66 -5,-3.6 4,-3.0 -6,-0.2 5,-0.3 0.211 27.8 114.6-106.8 12.7 -20.4 62.4 109.2 53 54 A E H > S+ 0 0 71 -6,-0.6 4,-1.9 1,-0.2 -1,-0.2 0.874 81.5 41.4 -50.2 -45.5 -19.5 59.6 111.6 54 55 A E H > S+ 0 0 157 -3,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.899 112.8 55.6 -68.7 -41.4 -23.1 58.7 112.2 55 56 A K H > S+ 0 0 154 1,-0.2 4,-2.5 2,-0.2 -2,-0.2 0.891 110.8 45.0 -55.4 -45.6 -23.8 59.1 108.5 56 57 A F H X S+ 0 0 101 -4,-3.0 4,-3.3 2,-0.2 5,-0.2 0.858 109.4 53.6 -70.4 -38.6 -21.0 56.6 107.7 57 58 A E H X S+ 0 0 133 -4,-1.9 4,-0.6 -5,-0.3 -1,-0.2 0.853 112.6 46.1 -64.6 -34.0 -22.1 54.1 110.4 58 59 A S H >X S+ 0 0 77 -4,-2.0 4,-0.9 2,-0.2 3,-0.8 0.963 114.3 47.2 -68.6 -56.3 -25.6 54.1 108.8 59 60 A F H >< S+ 0 0 96 -4,-2.5 3,-0.8 1,-0.3 -2,-0.2 0.901 112.8 48.4 -51.0 -48.1 -24.2 53.8 105.3 60 61 A A H 3< S+ 0 0 42 -4,-3.3 3,-0.3 1,-0.3 -1,-0.3 0.723 115.9 46.0 -67.0 -21.7 -21.9 50.9 106.4 61 62 A K H << S+ 0 0 116 -3,-0.8 4,-0.3 -4,-0.6 -1,-0.3 0.486 103.1 62.7 -97.7 -6.8 -25.0 49.5 108.1 62 63 A A S S+ 0 0 152 3,-0.1 4,-2.3 2,-0.0 5,-0.3 0.530 76.5 53.8-136.4 -49.8 -27.1 45.1 96.7 68 69 A E H > S+ 0 0 139 1,-0.2 4,-0.6 2,-0.2 -2,-0.1 0.709 111.9 53.1 -65.0 -18.8 -25.8 47.4 94.0 69 70 A L H > S+ 0 0 23 2,-0.2 4,-2.5 3,-0.1 5,-0.2 0.824 105.4 50.6 -87.4 -32.1 -23.7 48.9 96.7 70 71 A Q H > S+ 0 0 73 2,-0.2 4,-2.1 1,-0.2 5,-0.2 0.981 112.0 47.3 -65.9 -53.5 -22.1 45.6 97.8 71 72 A Q H X S+ 0 0 127 -4,-2.3 4,-1.4 1,-0.2 -1,-0.2 0.822 112.1 56.2 -52.4 -32.9 -21.2 44.8 94.2 72 73 A K H X S+ 0 0 112 -4,-0.6 4,-1.8 -5,-0.3 3,-0.3 0.946 106.5 42.6 -68.4 -52.6 -19.9 48.4 94.2 73 74 A I H X S+ 0 0 58 -4,-2.5 4,-2.2 1,-0.2 -1,-0.2 0.820 111.6 59.9 -66.7 -23.6 -17.4 48.3 97.1 74 75 A E H X S+ 0 0 93 -4,-2.1 4,-1.3 -5,-0.2 -1,-0.2 0.885 106.8 44.7 -68.2 -37.9 -16.4 44.9 95.7 75 76 A S H X S+ 0 0 49 -4,-1.4 4,-1.9 -3,-0.3 -1,-0.2 0.797 110.8 54.9 -73.0 -31.2 -15.4 46.7 92.5 76 77 A R H X S+ 0 0 169 -4,-1.8 4,-2.5 2,-0.2 -2,-0.2 0.866 103.2 54.7 -70.1 -36.8 -13.7 49.3 94.5 77 78 A K H X S+ 0 0 75 -4,-2.2 4,-2.5 1,-0.2 -2,-0.2 0.917 108.3 50.0 -62.9 -39.4 -11.6 46.7 96.3 78 79 A T H X S+ 0 0 53 -4,-1.3 4,-2.6 2,-0.2 -2,-0.2 0.902 109.4 50.2 -62.7 -45.1 -10.5 45.5 92.8 79 80 A D H X S+ 0 0 87 -4,-1.9 4,-2.5 1,-0.2 5,-0.2 0.936 111.6 49.0 -60.9 -45.5 -9.5 49.0 91.7 80 81 A I H X S+ 0 0 79 -4,-2.5 4,-2.5 1,-0.2 -2,-0.2 0.907 110.2 50.2 -60.6 -44.8 -7.5 49.4 94.9 81 82 A V H X S+ 0 0 11 -4,-2.5 4,-2.7 1,-0.2 -1,-0.2 0.909 111.1 49.8 -59.6 -42.6 -5.8 46.1 94.5 82 83 A I H X S+ 0 0 105 -4,-2.6 4,-2.1 2,-0.2 -2,-0.2 0.896 112.1 46.7 -63.6 -41.6 -4.9 47.1 90.8 83 84 A Q H X S+ 0 0 99 -4,-2.5 4,-2.1 2,-0.2 -1,-0.2 0.895 112.1 52.7 -65.1 -40.4 -3.5 50.5 92.0 84 85 A S H X S+ 0 0 0 -4,-2.5 4,-1.8 1,-0.2 3,-0.3 0.955 112.2 43.1 -57.1 -57.0 -1.6 48.7 94.7 85 86 A M H X S+ 0 0 50 -4,-2.7 4,-1.8 1,-0.2 -1,-0.2 0.821 112.0 54.7 -60.6 -37.0 -0.0 46.3 92.2 86 87 A A H X S+ 0 0 47 -4,-2.1 4,-2.5 -5,-0.2 -1,-0.2 0.852 107.1 50.7 -68.4 -34.4 0.7 49.1 89.8 87 88 A N H X S+ 0 0 53 -4,-2.1 4,-2.4 -3,-0.3 -2,-0.2 0.887 110.9 47.4 -68.6 -41.6 2.6 51.1 92.5 88 89 A I H < S+ 0 0 19 -4,-1.8 -2,-0.2 1,-0.2 -1,-0.2 0.864 116.2 45.0 -67.6 -35.2 4.7 48.1 93.4 89 90 A L H < S+ 0 0 145 -4,-1.8 -2,-0.2 -5,-0.2 -1,-0.2 0.873 113.6 53.1 -72.1 -40.9 5.4 47.5 89.7 90 91 A S H < 0 0 97 -4,-2.5 -2,-0.2 -5,-0.2 -3,-0.2 0.995 360.0 360.0 -57.8 -72.8 6.0 51.3 89.3 91 92 A G < 0 0 64 -4,-2.4 -3,-0.2 -63,-0.1 -2,-0.2 0.976 360.0 360.0 -58.4 360.0 8.6 51.8 92.0