==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 30-SEP-98 1BW6 . COMPND 2 MOLECULE: PROTEIN (CENTROMERE PROTEIN B); . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR J.IWAHARA,T.KIGAWA,K.KITAGAWA,H.MASUMOTO,T.OKAZAKI, . 56 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4723.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 30 53.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 8.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 42.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 208 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 117.2 34.2 -7.0 4.9 2 2 A G + 0 0 66 5,-0.0 5,-0.1 7,-0.0 6,-0.0 0.003 360.0 16.8-163.9 -77.7 34.9 -3.2 5.2 3 3 A P + 0 0 23 0, 0.0 5,-0.1 0, 0.0 4,-0.1 0.813 67.5 122.4 -78.6-103.3 36.9 -1.5 2.5 4 4 A K S S+ 0 0 126 1,-0.2 33,-0.1 2,-0.1 4,-0.1 0.848 83.6 45.8 46.7 36.6 37.1 -3.6 -0.8 5 5 A R S S- 0 0 213 2,-0.2 -1,-0.2 33,-0.1 3,-0.1 0.225 126.9 -23.2-166.4 -56.8 35.6 -0.6 -2.7 6 6 A R S S- 0 0 154 1,-0.4 35,-0.3 34,-0.1 2,-0.2 0.540 109.3 -2.1-140.3 -52.8 36.9 3.0 -2.0 7 7 A Q - 0 0 97 -5,-0.1 -1,-0.4 -4,-0.1 2,-0.2 -0.780 49.7-169.1-138.2-176.1 38.7 3.5 1.4 8 8 A L - 0 0 27 -2,-0.2 2,-0.3 -5,-0.1 28,-0.0 -0.836 40.0 -59.1-156.7-167.0 39.7 1.8 4.7 9 9 A T > - 0 0 82 -2,-0.2 4,-2.0 1,-0.1 5,-0.2 -0.638 41.3-121.5 -90.4 148.2 41.1 2.6 8.2 10 10 A F H > S+ 0 0 103 -2,-0.3 4,-1.5 1,-0.2 -1,-0.1 0.854 109.9 59.8 -54.7 -35.6 44.5 4.2 8.8 11 11 A R H >> S+ 0 0 210 1,-0.2 4,-0.9 2,-0.2 3,-0.6 0.980 112.0 35.2 -60.9 -56.3 45.7 1.2 10.8 12 12 A E H 3> S+ 0 0 60 1,-0.2 4,-1.5 2,-0.2 -1,-0.2 0.776 109.6 68.1 -70.6 -21.4 45.2 -1.4 8.0 13 13 A K H 3X S+ 0 0 41 -4,-2.0 4,-1.9 1,-0.2 -1,-0.2 0.887 93.3 58.0 -64.9 -35.2 46.3 1.3 5.5 14 14 A S H - 0 0 173 -2,-0.2 4,-1.5 1,-0.1 5,-0.1 -0.510 19.7-143.8 -79.6 148.8 52.0 -3.4 -9.9 28 28 A K H > S+ 0 0 80 2,-0.2 4,-1.9 -2,-0.2 -1,-0.1 0.947 102.1 38.1 -76.6 -48.8 50.7 -0.8 -7.5 29 29 A G H > S+ 0 0 16 2,-0.2 4,-2.3 1,-0.2 5,-0.3 0.936 116.9 51.9 -68.3 -44.8 47.0 -1.2 -8.4 30 30 A E H > S+ 0 0 91 1,-0.2 4,-1.4 2,-0.2 -1,-0.2 0.946 111.9 46.1 -58.2 -46.5 47.3 -5.0 -8.8 31 31 A I H X S+ 0 0 4 -4,-1.5 4,-1.1 2,-0.2 -1,-0.2 0.899 110.1 56.5 -63.9 -37.4 48.9 -5.3 -5.3 32 32 A A H >X S+ 0 0 0 -4,-1.9 4,-1.1 1,-0.2 3,-0.9 0.984 113.6 36.3 -59.3 -58.9 46.2 -3.0 -3.9 33 33 A R H 3< S+ 0 0 168 -4,-2.3 -1,-0.2 1,-0.2 -2,-0.2 0.713 103.3 77.8 -69.1 -15.5 43.2 -5.2 -5.0 34 34 A R H 3< S- 0 0 185 -4,-1.4 -1,-0.2 -5,-0.3 -2,-0.2 0.899 123.4 -0.1 -60.7 -37.8 45.3 -8.3 -4.3 35 35 A F H << S+ 0 0 75 -4,-1.1 -1,-0.2 -3,-0.9 -2,-0.2 0.190 144.7 0.6-136.7 17.1 44.6 -7.8 -0.5 36 36 A N S < S- 0 0 14 -4,-1.1 -3,-0.2 -5,-0.1 -4,-0.1 -0.181 101.1 -35.4-163.2-100.1 42.4 -4.7 -0.3 37 37 A I - 0 0 2 -5,-0.3 -3,-0.2 1,-0.2 -2,-0.2 -0.832 65.1 -67.7-138.8 178.5 41.0 -2.3 -3.1 38 38 A P >> - 0 0 48 0, 0.0 2,-2.0 0, 0.0 4,-0.8 0.040 65.3 -82.5 -59.7 174.2 41.8 -0.8 -6.5 39 39 A P T 34 S+ 0 0 65 0, 0.0 -10,-0.1 0, 0.0 -9,-0.1 -0.218 103.2 98.7 -76.8 50.4 44.6 1.9 -6.9 40 40 A S T 3> S+ 0 0 77 -2,-2.0 4,-0.7 -11,-0.1 -33,-0.1 0.855 99.2 9.7-100.5 -60.5 42.2 4.7 -5.7 41 41 A T H <> S+ 0 0 29 -3,-0.5 4,-1.9 -35,-0.3 5,-0.2 0.785 128.6 58.8 -90.0 -29.4 43.1 5.3 -2.1 42 42 A L H X S+ 0 0 0 -4,-0.8 4,-0.6 1,-0.2 -1,-0.1 0.770 101.3 57.1 -71.3 -23.0 46.2 3.0 -2.1 43 43 A S H > S+ 0 0 32 2,-0.2 4,-0.7 -5,-0.2 3,-0.2 0.923 109.6 42.6 -74.2 -42.7 47.8 5.2 -4.9 44 44 A T H >X S+ 0 0 96 -4,-0.7 4,-1.5 1,-0.2 3,-0.7 0.910 114.8 49.8 -70.3 -41.2 47.6 8.5 -2.8 45 45 A I H 3< S+ 0 0 5 -4,-1.9 -1,-0.2 1,-0.2 -2,-0.2 0.662 100.9 66.7 -73.4 -12.6 48.8 6.8 0.4 46 46 A L H 3< S+ 0 0 31 -4,-0.6 -1,-0.2 -3,-0.2 -2,-0.2 0.796 105.5 40.8 -78.4 -26.6 51.8 5.2 -1.5 47 47 A K H << S+ 0 0 176 -3,-0.7 3,-0.4 -4,-0.7 -2,-0.2 0.911 125.0 33.5 -87.1 -46.7 53.4 8.6 -2.1 48 48 A N S >X S+ 0 0 66 -4,-1.5 4,-1.9 1,-0.2 3,-0.5 0.080 80.0 125.9 -95.3 25.9 52.8 10.3 1.3 49 49 A K H 3> S+ 0 0 56 1,-0.3 4,-1.7 2,-0.2 -1,-0.2 0.889 76.9 47.4 -51.7 -39.5 53.1 6.9 3.2 50 50 A R H 34 S+ 0 0 197 -3,-0.4 -1,-0.3 1,-0.2 -2,-0.1 0.837 107.1 57.5 -72.9 -29.4 55.8 8.5 5.4 51 51 A A H X4 S+ 0 0 67 -3,-0.5 3,-0.5 2,-0.2 4,-0.3 0.861 108.9 45.0 -69.7 -32.8 53.6 11.6 6.0 52 52 A I H 3< S+ 0 0 37 -4,-1.9 3,-0.3 1,-0.2 4,-0.3 0.880 121.1 38.6 -78.5 -35.7 50.7 9.4 7.4 53 53 A L T 3< S+ 0 0 47 -4,-1.7 -1,-0.2 -5,-0.3 -2,-0.2 0.138 88.4 102.6 -98.1 21.6 53.2 7.4 9.6 54 54 A A S < S+ 0 0 72 -3,-0.5 -1,-0.2 1,-0.1 -2,-0.1 0.920 79.1 50.8 -69.9 -42.2 55.2 10.5 10.5 55 55 A S 0 0 113 -3,-0.3 -1,-0.1 -4,-0.3 -2,-0.1 0.980 360.0 360.0 -60.2 -56.8 53.7 10.8 14.0 56 56 A E 0 0 210 -4,-0.3 -1,-0.2 0, 0.0 -2,-0.1 -0.313 360.0 360.0 50.2 360.0 54.3 7.1 15.0