==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 03-DEC-99 1BY6 . COMPND 2 MOLECULE: APOLIPOPROTEIN C-II; . SOURCE 2 SYNTHETIC: YES; . AUTHOR R.STORJOHANN,A.ROZEK,J.T.SPARROW,R.J.CUSHLEY . 36 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4149.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 12 33.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 11.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 16.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 44 A A 0 0 150 0, 0.0 2,-0.5 0, 0.0 3,-0.2 0.000 360.0 360.0 360.0 119.4 -24.6 -6.6 8.6 2 45 A V + 0 0 114 1,-0.1 3,-0.0 2,-0.1 0, 0.0 -0.652 360.0 117.5-117.7 77.6 -24.1 -3.6 6.3 3 46 A D + 0 0 146 -2,-0.5 -1,-0.1 1,-0.1 0, 0.0 0.246 31.3 118.5-122.9 11.7 -21.6 -4.6 3.6 4 47 A E S S- 0 0 161 -3,-0.2 -1,-0.1 1,-0.1 -2,-0.1 0.942 102.5 -45.0 -42.4 -68.2 -23.7 -4.2 0.5 5 48 A K - 0 0 138 -3,-0.0 -1,-0.1 2,-0.0 -3,-0.0 0.545 60.1-179.1-135.6 -50.8 -21.5 -1.6 -1.1 6 49 A L S S- 0 0 110 2,-0.1 4,-0.1 4,-0.0 -4,-0.0 0.907 79.4 -53.7 43.1 48.0 -20.5 1.1 1.4 7 50 A R - 0 0 171 1,-0.1 4,-0.2 2,-0.1 -2,-0.0 0.791 52.8-151.0 56.9 117.1 -18.5 2.9 -1.4 8 51 A D S S+ 0 0 96 2,-0.1 3,-0.3 1,-0.1 -1,-0.1 0.745 87.3 72.6 -89.0 -24.2 -16.0 0.7 -3.2 9 52 A L S > S+ 0 0 127 1,-0.3 4,-0.5 3,-0.1 5,-0.4 0.979 102.6 38.9 -53.7 -61.1 -13.7 3.6 -4.0 10 53 A Y T 4 S+ 0 0 170 1,-0.2 2,-0.7 2,-0.1 -1,-0.3 0.666 114.7 63.8 -65.9 -11.4 -12.4 4.0 -0.4 11 54 A S T 4 S+ 0 0 73 -3,-0.3 -1,-0.2 -4,-0.2 -4,-0.0 -0.709 94.0 50.6-114.4 82.7 -12.5 0.2 -0.2 12 55 A K T 4 S+ 0 0 156 -2,-0.7 -2,-0.1 -3,-0.1 -1,-0.1 0.223 118.5 10.5-177.5 -37.9 -9.9 -1.1 -2.8 13 56 A S S >X S+ 0 0 68 -4,-0.5 3,-2.3 2,-0.1 4,-0.5 0.638 105.5 75.0-128.4 -39.2 -6.5 0.6 -2.5 14 57 A T T 34 S+ 0 0 79 -5,-0.4 -3,-0.1 1,-0.3 -4,-0.1 0.765 71.6 95.4 -51.2 -19.9 -6.3 2.7 0.7 15 58 A A T 34 S- 0 0 68 1,-0.1 -1,-0.3 -5,-0.1 -2,-0.1 0.796 93.9-132.5 -43.2 -26.2 -6.0 -0.7 2.4 16 59 A A T <4 + 0 0 45 -3,-2.3 3,-0.3 4,-0.1 5,-0.2 0.937 49.6 154.6 72.5 46.0 -2.3 0.0 2.2 17 60 A M >< + 0 0 138 -4,-0.5 3,-3.6 1,-0.2 -1,-0.1 -0.159 47.9 47.0 -91.6-168.1 -1.2 -3.4 0.8 18 61 A S T 3 S- 0 0 103 1,-0.3 -1,-0.2 2,-0.1 3,-0.1 0.804 125.2 -83.9 44.9 25.7 1.8 -4.2 -1.3 19 62 A T T 3 S+ 0 0 82 -3,-0.3 2,-0.9 1,-0.2 5,-0.4 0.824 96.2 139.0 50.2 27.4 3.7 -2.2 1.4 20 63 A Y < + 0 0 131 -3,-3.6 -3,-0.2 1,-0.2 -1,-0.2 -0.527 7.8 130.6-102.2 70.0 2.6 0.8 -0.7 21 64 A T S S- 0 0 109 -2,-0.9 -1,-0.2 -5,-0.2 -5,-0.1 0.949 90.4 -8.5 -83.4 -54.9 1.6 3.4 1.9 22 65 A G S S- 0 0 51 -3,-0.3 -2,-0.1 2,-0.1 -6,-0.0 0.763 113.9 -69.2-105.1 -78.7 3.5 6.4 0.6 23 66 A I S S+ 0 0 135 -4,-0.1 2,-0.4 1,-0.0 -3,-0.1 -0.045 79.1 125.2-178.9 61.3 5.9 5.4 -2.2 24 67 A F + 0 0 85 -5,-0.4 2,-0.3 3,-0.0 -3,-0.2 -0.921 23.1 130.6-134.9 114.3 8.9 3.2 -1.3 25 68 A T - 0 0 71 -2,-0.4 3,-0.4 1,-0.3 5,-0.1 -0.990 58.6 -4.2-157.5 148.1 9.6 -0.2 -2.9 26 69 A D S > S+ 0 0 108 -2,-0.3 3,-1.3 1,-0.2 2,-0.7 0.138 118.7 35.1 52.8 176.9 12.7 -1.9 -4.5 27 70 A Q G > S+ 0 0 121 1,-0.3 3,-3.8 2,-0.2 -1,-0.2 -0.157 118.9 50.0 45.3 -92.6 15.9 0.1 -4.8 28 71 A V G 3 S+ 0 0 116 -2,-0.7 3,-0.4 -3,-0.4 -1,-0.3 0.800 113.3 51.2 -43.1 -26.5 15.4 2.1 -1.5 29 72 A L G < S+ 0 0 121 -3,-1.3 -1,-0.3 1,-0.2 -2,-0.2 0.106 108.7 51.7-100.2 24.7 14.8 -1.4 -0.1 30 73 A S S < S+ 0 0 74 -3,-3.8 -1,-0.2 -4,-0.2 -2,-0.2 -0.058 83.3 81.6-149.4 40.1 18.0 -2.9 -1.5 31 74 A V > + 0 0 106 -3,-0.4 3,-0.6 2,-0.1 4,-0.2 0.224 65.0 88.2-129.0 11.4 20.9 -0.6 -0.5 32 75 A L G > S+ 0 0 112 1,-0.2 3,-0.6 2,-0.1 4,-0.5 0.853 90.8 46.8 -79.9 -34.6 21.5 -1.9 3.0 33 76 A K G 3 S+ 0 0 196 3,-0.2 -1,-0.2 1,-0.2 -2,-0.1 0.170 85.2 95.6 -92.8 21.6 24.0 -4.6 1.9 34 77 A G G < S- 0 0 60 -3,-0.6 -1,-0.2 1,-0.1 -2,-0.1 0.771 119.0 -25.6 -80.9 -23.9 25.8 -2.1 -0.3 35 78 A E < 0 0 176 -3,-0.6 -2,-0.2 -4,-0.2 -1,-0.1 0.146 360.0 360.0-178.8 36.9 28.4 -1.4 2.4 36 79 A E 0 0 182 -4,-0.5 -3,-0.2 0, 0.0 -4,-0.1 0.545 360.0 360.0-140.0 360.0 26.8 -2.1 5.8