==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 19-OCT-98 1BYP . COMPND 2 MOLECULE: PROTEIN (PLASTOCYANIN); . SOURCE 2 ORGANISM_SCIENTIFIC: SILENE LATIFOLIA SUBSP. ALBA; . AUTHOR H.SUGAWARA,T.INOUE,C.LI,M.GOTOWDA,T.HIBINO,T.TAKABE,Y.KAI . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5121.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 64 64.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 10 10.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 22 22.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 12.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 10.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 46 0, 0.0 27,-2.9 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 148.4 20.6 11.1 5.5 2 2 A E E -a 28 0A 99 25,-0.2 2,-0.4 69,-0.0 27,-0.2 -0.944 360.0-166.7-122.6 136.8 18.5 14.0 4.3 3 3 A V E -a 29 0A 0 25,-2.5 27,-2.5 -2,-0.4 2,-0.3 -0.999 18.2-132.3-122.4 129.1 14.8 14.4 5.1 4 4 A L E -aB 30 15A 51 11,-3.2 11,-2.1 -2,-0.4 2,-0.9 -0.656 9.1-138.6 -84.9 138.1 12.6 16.9 3.2 5 5 A L E S+aB 31 14A 0 25,-2.9 27,-2.5 -2,-0.3 28,-2.0 -0.852 76.5 2.5 -98.0 103.0 10.3 19.2 5.2 6 6 A G S S- 0 0 0 7,-2.2 2,-0.3 -2,-0.9 6,-0.2 0.227 83.2 -97.6 97.0 150.3 7.1 19.3 3.2 7 7 A S > - 0 0 33 4,-2.8 3,-2.2 25,-0.1 25,-0.0 -0.679 31.9-115.9 -95.0 157.1 6.0 17.5 -0.0 8 8 A S T 3 S+ 0 0 110 1,-0.3 26,-0.1 -2,-0.3 -1,-0.1 0.733 114.9 57.4 -67.7 -27.6 6.3 19.3 -3.4 9 9 A D T 3 S- 0 0 134 24,-0.1 -1,-0.3 2,-0.0 -3,-0.0 0.389 129.4 -95.0 -79.5 0.8 2.5 19.3 -3.9 10 10 A G S < S+ 0 0 42 -3,-2.2 -2,-0.2 1,-0.3 23,-0.0 0.256 71.6 156.2 101.3 -0.6 2.1 21.1 -0.6 11 11 A G - 0 0 29 1,-0.1 -4,-2.8 -5,-0.1 2,-1.9 -0.202 47.3-128.7 -59.2 129.5 1.5 18.1 1.6 12 12 A L + 0 0 63 -6,-0.2 2,-0.3 78,-0.2 -1,-0.1 -0.519 68.0 113.5 -80.0 76.8 2.4 18.8 5.2 13 13 A A S S- 0 0 36 -2,-1.9 -7,-2.2 79,-0.2 2,-0.3 -0.955 71.3-109.4-144.1 155.1 4.7 15.8 5.6 14 14 A F E -B 5 0A 3 79,-0.4 -9,-0.2 -2,-0.3 79,-0.1 -0.707 43.9-122.0 -76.7 138.3 8.2 14.6 6.2 15 15 A V E S+B 4 0A 58 -11,-2.1 -11,-3.2 -2,-0.3 2,-0.1 -0.957 104.3 20.3-127.8 108.3 9.6 13.0 3.0 16 16 A P S S- 0 0 58 0, 0.0 -1,-0.3 0, 0.0 3,-0.1 0.638 82.1-172.2 -79.7 165.6 10.4 10.3 3.6 17 17 A S S S+ 0 0 64 1,-0.2 78,-2.2 -2,-0.1 2,-0.4 0.496 76.7 38.7-102.0 -4.2 8.3 9.9 6.8 18 18 A D E S+d 95 0B 95 76,-0.2 2,-0.3 2,-0.0 -1,-0.2 -0.982 76.7 155.2-142.5 115.4 9.8 6.6 7.9 19 19 A L E -d 96 0B 22 76,-1.4 78,-2.3 -2,-0.4 2,-0.4 -0.987 32.9-133.8-140.9 165.2 13.5 6.0 7.4 20 20 A S E +d 97 0B 83 -2,-0.3 2,-0.3 76,-0.2 78,-0.2 -0.962 24.6 175.8-120.3 137.1 16.5 3.9 8.7 21 21 A I E -d 98 0B 9 76,-2.6 78,-2.7 -2,-0.4 2,-0.2 -0.846 31.6-102.0-132.8 168.1 19.9 5.3 9.5 22 22 A A > - 0 0 52 -2,-0.3 3,-2.3 76,-0.2 52,-0.2 -0.612 48.9 -91.0 -86.1 146.3 23.2 3.9 10.9 23 23 A S T 3 S+ 0 0 54 76,-2.4 52,-0.3 1,-0.3 3,-0.1 -0.440 119.2 24.4 -52.9 127.2 24.2 4.7 14.5 24 24 A G T 3 S+ 0 0 47 50,-2.8 -1,-0.3 1,-0.3 2,-0.2 0.442 91.3 141.1 92.8 -0.7 26.2 7.9 14.3 25 25 A E E < - C 0 74A 61 -3,-2.3 49,-1.6 49,-0.5 2,-0.5 -0.550 49.9-128.3 -76.1 139.2 24.6 9.1 11.1 26 26 A K E - C 0 73A 107 47,-0.2 2,-0.6 -2,-0.2 47,-0.3 -0.756 16.6-154.7 -85.5 128.1 23.8 12.8 10.6 27 27 A I E - C 0 72A 1 45,-3.3 45,-2.1 -2,-0.5 2,-0.6 -0.929 4.1-161.8-100.8 127.3 20.3 13.6 9.6 28 28 A T E -aC 2 71A 23 -27,-2.9 -25,-2.5 -2,-0.6 2,-0.6 -0.923 4.4-157.0-107.3 117.6 19.8 16.9 7.7 29 29 A F E -aC 3 70A 0 41,-3.5 41,-2.0 -2,-0.6 2,-0.5 -0.827 16.9-165.8 -93.6 119.6 16.2 18.2 7.7 30 30 A K E -aC 4 69A 56 -27,-2.5 -25,-2.9 -2,-0.6 39,-0.2 -0.932 23.4-116.6-116.6 131.3 15.8 20.5 4.8 31 31 A N E +a 5 0A 6 37,-2.9 36,-0.9 -2,-0.5 -25,-0.1 -0.322 43.6 157.6 -63.9 127.1 13.0 23.0 4.0 32 32 A N - 0 0 69 -27,-2.5 2,-0.3 1,-0.4 -26,-0.2 0.687 58.1 -24.4-121.6 -48.4 11.2 21.9 0.8 33 33 A A S S+ 0 0 21 -28,-2.0 -1,-0.4 -22,-0.1 -24,-0.1 -0.986 110.2 33.6-162.2 158.6 7.7 23.4 0.8 34 34 A G S S- 0 0 39 -2,-0.3 -28,-0.1 1,-0.2 -1,-0.0 0.715 88.3-165.5 72.0 20.5 4.9 24.7 3.0 35 35 A F + 0 0 67 -30,-0.1 -1,-0.2 29,-0.1 29,-0.1 -0.279 61.1 90.7 -75.0 165.7 7.2 26.2 5.7 36 36 A P + 0 0 48 0, 0.0 2,-0.3 0, 0.0 28,-0.2 0.328 64.3 153.6 -79.1 161.6 7.7 27.3 8.3 37 37 A H B -G 63 0C 0 26,-1.6 26,-3.1 -2,-0.1 2,-0.3 -0.915 19.4-177.4-141.9 163.3 8.6 23.9 9.9 38 38 A N - 0 0 0 -2,-0.3 2,-0.4 24,-0.2 49,-0.1 -0.878 23.2-119.4-145.1-177.0 10.7 22.7 12.8 39 39 A D + 0 0 0 -2,-0.3 18,-2.6 45,-0.1 2,-0.4 -0.952 26.1 174.3-132.9 133.5 11.5 19.3 14.3 40 40 A L E -E 83 0B 9 43,-2.9 43,-2.5 -2,-0.4 2,-0.3 -0.989 22.8-136.8-133.9 132.9 10.8 18.1 17.7 41 41 A F E -E 82 0B 2 -2,-0.4 2,-0.7 11,-0.3 41,-0.2 -0.674 25.6-116.5 -90.7 143.4 11.4 14.6 19.1 42 42 A D > - 0 0 39 39,-2.3 3,-2.5 -2,-0.3 39,-0.3 -0.676 15.5-147.0 -78.9 113.9 8.8 13.0 21.3 43 43 A K T 3 S+ 0 0 145 -2,-0.7 3,-0.4 1,-0.3 -1,-0.1 0.724 97.3 49.4 -54.9 -21.9 10.1 12.5 24.8 44 44 A K T 3 S+ 0 0 138 1,-0.2 -1,-0.3 37,-0.0 -2,-0.0 0.422 109.3 51.3 -93.7 -11.2 8.0 9.3 25.3 45 45 A E S < S+ 0 0 103 -3,-2.5 36,-1.9 36,-0.2 -3,-0.2 -0.297 87.9 90.0-125.7 45.8 9.0 7.6 22.0 46 46 A V S S- 0 0 25 -3,-0.4 34,-0.2 34,-0.2 3,-0.1 -0.942 84.0 -86.1-127.3 159.6 12.9 7.8 22.0 47 47 A P > - 0 0 23 0, 0.0 3,-1.6 0, 0.0 31,-0.1 -0.174 57.4 -82.8 -58.3 160.2 15.3 5.2 23.3 48 48 A A T 3 S+ 0 0 95 1,-0.2 3,-0.1 3,-0.0 0, 0.0 -0.180 113.4 25.8 -65.1 143.9 16.4 5.2 27.0 49 49 A G T 3 S+ 0 0 84 1,-0.3 2,-0.5 -3,-0.1 -1,-0.2 0.401 87.5 125.7 88.4 -14.2 19.2 7.7 27.9 50 50 A V < - 0 0 30 -3,-1.6 2,-0.8 -7,-0.1 -1,-0.3 -0.746 54.6-143.1 -80.3 130.3 18.5 10.1 25.0 51 51 A D >> - 0 0 100 -2,-0.5 3,-1.1 1,-0.2 4,-0.8 -0.855 7.1-161.3 -95.0 106.3 17.9 13.7 26.1 52 52 A V H 3> S+ 0 0 25 -2,-0.8 4,-2.0 1,-0.2 3,-0.3 0.805 86.7 64.3 -59.5 -25.8 15.2 15.1 23.7 53 53 A T H 34 S+ 0 0 109 1,-0.2 -1,-0.2 2,-0.2 -2,-0.0 0.800 101.8 50.4 -73.8 -19.3 16.2 18.7 24.6 54 54 A K H <4 S+ 0 0 172 -3,-1.1 -1,-0.2 1,-0.1 -2,-0.2 0.769 117.9 36.1 -86.3 -24.1 19.6 18.1 23.0 55 55 A I H < S+ 0 0 16 -4,-0.8 2,-0.3 -3,-0.3 -2,-0.2 0.638 105.3 77.3-105.0 -13.5 18.3 16.7 19.7 56 56 A S S < S- 0 0 15 -4,-2.0 -16,-0.2 -5,-0.1 3,-0.1 -0.670 80.0-117.6 -91.4 150.6 15.1 18.7 19.2 57 57 A M - 0 0 13 -18,-2.6 -16,-0.1 -2,-0.3 -2,-0.1 -0.585 50.2 -89.6 -67.2 149.2 14.8 22.3 18.0 58 58 A P > - 0 0 67 0, 0.0 3,-1.5 0, 0.0 -19,-0.1 -0.323 42.3-114.0 -56.0 138.6 13.3 24.5 20.7 59 59 A E T 3 S+ 0 0 102 1,-0.3 -2,-0.1 -3,-0.1 26,-0.1 0.735 113.7 45.7 -52.1 -32.4 9.5 24.4 20.1 60 60 A E T 3 S+ 0 0 147 25,-0.1 2,-0.4 2,-0.1 -1,-0.3 0.447 88.4 98.1 -96.6 -5.0 9.3 28.0 19.1 61 61 A D < - 0 0 82 -3,-1.5 2,-0.3 2,-0.0 -4,-0.1 -0.745 57.9-167.1 -79.9 140.5 12.3 28.1 16.8 62 62 A L - 0 0 64 -2,-0.4 2,-0.7 -24,-0.1 -24,-0.2 -0.906 29.1-133.1-129.0 147.5 11.2 27.8 13.1 63 63 A L B +G 37 0C 11 -26,-3.1 -26,-1.6 -2,-0.3 4,-0.1 -0.913 37.9 168.8 -92.2 112.1 12.9 27.2 9.7 64 64 A N + 0 0 97 -2,-0.7 -1,-0.1 -28,-0.2 -29,-0.1 0.729 42.4 62.8-102.1 -28.7 11.2 30.0 7.7 65 65 A A S > S- 0 0 39 1,-0.1 3,-1.8 -29,-0.0 -34,-0.2 -0.644 88.8 -87.9-110.6 155.8 13.0 30.3 4.4 66 66 A P T 3 S+ 0 0 105 0, 0.0 -1,-0.1 0, 0.0 -34,-0.1 -0.286 111.9 16.5 -57.1 136.9 13.6 28.1 1.4 67 67 A G T 3 S+ 0 0 35 -36,-0.9 -35,-0.1 1,-0.2 2,-0.1 0.368 85.0 145.6 86.3 -9.2 16.6 25.9 1.8 68 68 A E < - 0 0 69 -3,-1.8 -37,-2.9 -38,-0.1 2,-0.3 -0.426 30.6-160.6 -64.5 152.8 17.0 26.3 5.5 69 69 A E E -C 30 0A 105 -39,-0.2 2,-0.4 -2,-0.1 -39,-0.2 -0.900 22.1-164.9-136.0 153.8 18.4 23.2 7.3 70 70 A Y E -C 29 0A 49 -41,-2.0 -41,-3.5 -2,-0.3 2,-0.4 -0.988 18.5-166.7-138.2 125.1 18.6 21.6 10.8 71 71 A S E +C 28 0A 47 -2,-0.4 2,-0.3 -43,-0.3 -43,-0.2 -0.917 10.7 171.4-117.7 146.0 21.0 18.7 11.4 72 72 A V E -C 27 0A 13 -45,-2.1 -45,-3.3 -2,-0.4 2,-0.5 -0.991 23.1-139.1-151.7 141.3 21.3 16.3 14.2 73 73 A T E -C 26 0A 70 -2,-0.3 2,-0.5 -47,-0.3 -47,-0.2 -0.965 15.5-157.7-103.4 132.2 23.4 13.2 14.8 74 74 A L E +C 25 0A 3 -49,-1.6 -50,-2.8 -2,-0.5 -49,-0.5 -0.901 20.5 164.5-107.1 134.6 21.7 10.2 16.5 75 75 A T + 0 0 78 -2,-0.5 2,-0.2 -52,-0.3 -1,-0.1 0.798 48.8 86.6-112.9 -42.0 23.9 7.5 18.2 76 76 A E S S- 0 0 101 1,-0.1 22,-0.1 -53,-0.1 2,-0.1 -0.449 77.9-122.2 -71.0 130.0 21.6 5.4 20.5 77 77 A K + 0 0 121 -2,-0.2 2,-0.3 20,-0.1 22,-0.2 -0.416 66.1 59.8 -72.8 150.5 20.0 2.5 18.6 78 78 A G E S- F 0 98B 29 20,-2.1 20,-2.8 -2,-0.1 2,-0.4 -0.857 87.0 -38.9 130.0-166.7 16.2 2.1 18.5 79 79 A T E - F 0 97B 60 -2,-0.3 2,-0.4 18,-0.2 18,-0.2 -0.765 43.7-169.7-105.4 134.5 13.1 4.0 17.2 80 80 A Y E - F 0 96B 2 16,-2.5 16,-2.3 -2,-0.4 2,-0.4 -0.997 6.9-156.2-121.2 133.5 12.6 7.8 17.5 81 81 A K E + F 0 95B 70 -36,-1.9 -39,-2.3 -2,-0.4 2,-0.3 -0.881 18.8 174.5-110.6 141.1 9.4 9.6 16.7 82 82 A F E -EF 41 94B 1 12,-2.5 12,-2.7 -2,-0.4 2,-0.3 -0.903 8.4-173.1-140.4 163.5 9.4 13.3 15.8 83 83 A Y E -EF 40 93B 60 -43,-2.5 -43,-2.9 -2,-0.3 2,-0.6 -0.982 31.3-108.5-150.9 164.2 7.0 15.9 14.6 84 84 A C > - 0 0 0 8,-2.2 3,-0.5 -2,-0.3 4,-0.4 -0.915 29.9-142.9 -97.5 121.3 6.8 19.5 13.3 85 85 A A G > S+ 0 0 28 -2,-0.6 3,-1.4 1,-0.2 4,-0.3 0.927 95.9 42.8 -54.9 -49.7 5.3 21.7 16.0 86 86 A P G 3 S+ 0 0 70 0, 0.0 -1,-0.2 0, 0.0 3,-0.1 0.801 125.2 36.4 -71.0 -25.0 3.2 24.1 13.9 87 87 A H G < >S+ 0 0 34 -3,-0.5 5,-2.0 5,-0.1 3,-0.4 0.203 82.0 110.6-111.4 21.4 1.9 21.2 11.8 88 88 A A T X 5S+ 0 0 37 -3,-1.4 3,-1.3 -4,-0.4 -1,-0.1 0.929 82.4 44.8 -69.7 -37.8 1.6 18.4 14.4 89 89 A G T 3 5S+ 0 0 91 -4,-0.3 -1,-0.3 1,-0.3 -2,-0.1 0.732 106.8 64.1 -78.7 -13.9 -2.2 18.3 14.4 90 90 A A T 3 5S- 0 0 64 -3,-0.4 -1,-0.3 2,-0.1 -2,-0.2 0.450 124.6 -96.1 -89.8 -0.4 -2.1 18.4 10.6 91 91 A G T < 5S+ 0 0 53 -3,-1.3 2,-1.9 -4,-0.3 -3,-0.2 0.429 74.6 143.9 105.3 4.7 -0.3 15.0 10.3 92 92 A M < + 0 0 0 -5,-2.0 -8,-2.2 -8,-0.2 2,-0.3 -0.508 32.3 127.4 -83.4 81.5 3.3 16.2 10.0 93 93 A V E + F 0 83B 52 -2,-1.9 -79,-0.4 -10,-0.2 2,-0.3 -0.921 31.6 178.7-138.2 146.7 4.9 13.3 12.0 94 94 A G E - F 0 82B 4 -12,-2.7 -12,-2.5 -2,-0.3 2,-0.3 -0.957 16.7-140.2-147.7 177.1 7.7 10.9 11.3 95 95 A K E -dF 18 81B 84 -78,-2.2 -76,-1.4 -2,-0.3 2,-0.4 -0.997 8.0-168.6-144.4 139.8 9.8 8.1 12.5 96 96 A V E -dF 19 80B 0 -16,-2.3 -16,-2.5 -2,-0.3 2,-0.5 -0.997 8.7-155.3-130.9 135.0 13.5 7.1 12.3 97 97 A T E -dF 20 79B 28 -78,-2.3 -76,-2.6 -2,-0.4 2,-0.5 -0.958 9.0-153.6-107.6 125.4 15.0 3.8 13.2 98 98 A V E dF 21 78B 1 -20,-2.8 -20,-2.1 -2,-0.5 -76,-0.2 -0.926 360.0 360.0-101.6 121.2 18.8 3.9 14.1 99 99 A N 0 0 119 -78,-2.7 -76,-2.4 -2,-0.5 -2,-0.0 -0.785 360.0 360.0-110.9 360.0 20.5 0.5 13.5