==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 21-OCT-98 1BYY . COMPND 2 MOLECULE: PROTEIN (SODIUM CHANNEL ALPHA-SUBUNIT); . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR C.A.ROHL,F.A.BOECKMAN,C.BAKER,T.SCHEUER,W.A.CATTERALL, . 21 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2602.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 11 52.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 9.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 33.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1486 A Q 0 0 242 0, 0.0 3,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 33.0 13.5 -5.0 7.0 2 1487 A D - 0 0 134 1,-0.2 2,-1.3 0, 0.0 0, 0.0 0.075 360.0 -46.5 -71.2-168.1 12.2 -6.2 3.6 3 1488 A I S S- 0 0 148 1,-0.0 -1,-0.2 3,-0.0 3,-0.0 -0.453 72.4-149.0 -65.7 94.8 11.0 -3.8 0.9 4 1489 A F - 0 0 167 -2,-1.3 -1,-0.0 -3,-0.2 0, 0.0 0.135 27.6 -80.6 -53.5-178.8 8.8 -1.6 3.2 5 1490 A M - 0 0 52 1,-0.1 2,-0.2 4,-0.1 -1,-0.0 0.124 48.0-150.8 -70.9-164.8 5.7 0.0 1.7 6 1491 A T > - 0 0 61 -3,-0.0 4,-1.5 1,-0.0 5,-0.2 -0.816 37.3 -75.9-152.7-167.5 5.9 3.3 -0.3 7 1492 A E H > S+ 0 0 162 -2,-0.2 4,-0.9 2,-0.2 -2,-0.0 0.814 131.1 39.3 -72.8 -27.9 3.8 6.4 -1.2 8 1493 A E H > S+ 0 0 134 2,-0.2 4,-1.1 3,-0.1 5,-0.2 0.924 115.1 48.4 -86.6 -51.3 1.6 4.3 -3.6 9 1494 A Q H > S+ 0 0 84 2,-0.2 4,-0.9 1,-0.2 -2,-0.2 0.882 109.1 57.6 -57.5 -37.6 1.3 1.0 -1.6 10 1495 A K H >< S+ 0 0 130 -4,-1.5 3,-1.2 1,-0.2 4,-0.3 0.991 116.9 30.1 -58.6 -62.7 0.4 3.1 1.5 11 1496 A K H 3< S+ 0 0 160 -4,-0.9 3,-0.2 1,-0.2 -1,-0.2 0.542 113.9 67.7 -75.7 -2.5 -2.7 4.9 -0.0 12 1497 A Y H >X S+ 0 0 112 -4,-1.1 4,-1.8 1,-0.2 3,-0.8 0.637 79.8 77.0 -90.2 -13.7 -3.2 1.8 -2.2 13 1498 A Y H >S+ 0 0 104 -4,-0.3 5,-1.2 -3,-0.2 4,-0.8 0.744 106.7 48.6 -75.7 -20.6 -7.6 1.4 0.7 15 1500 A A H <45S+ 0 0 54 -3,-0.8 -2,-0.2 -4,-0.2 -1,-0.2 0.846 112.2 46.5 -86.5 -35.7 -8.2 0.3 -2.9 16 1501 A M H <5S+ 0 0 90 -4,-1.8 -2,-0.2 1,-0.2 -3,-0.1 0.859 123.0 35.9 -74.1 -33.3 -7.2 -3.4 -2.3 17 1502 A K H <5S- 0 0 133 -4,-1.7 -2,-0.2 -5,-0.2 -1,-0.2 0.723 102.5-137.6 -90.4 -23.4 -9.4 -3.5 0.9 18 1503 A K T <5 - 0 0 160 -4,-0.8 -3,-0.2 -5,-0.2 -4,-0.1 0.983 66.1 -48.2 62.6 80.7 -12.1 -1.3 -0.6 19 1504 A L S