==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA-BINDING PROTEIN 16-AUG-05 2BZF . COMPND 2 MOLECULE: BARRIER-TO-AUTOINTEGRATION FACTOR; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.M.BRADLEY,D.R.RONNING,R.GHIRLANDO,R.CRAIGIE,F.DYDA . 88 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5112.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 70.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 11.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 46 52.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A T 0 0 190 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -43.8 -2.0 21.6 -138.0 2 3 A T - 0 0 45 77,-0.0 73,-0.0 3,-0.0 0, 0.0 -0.991 360.0-116.1-132.7 139.2 0.9 19.3 -137.3 3 4 A S > - 0 0 56 -2,-0.4 4,-1.8 1,-0.1 5,-0.1 -0.218 23.2-118.0 -70.2 162.2 3.1 17.5 -139.8 4 5 A Q H > S+ 0 0 111 1,-0.2 4,-2.3 2,-0.2 5,-0.2 0.928 118.3 59.4 -66.2 -40.6 3.2 13.8 -140.1 5 6 A K H > S+ 0 0 78 1,-0.2 4,-1.6 2,-0.2 -1,-0.2 0.926 103.5 53.5 -50.6 -46.8 6.9 14.0 -139.1 6 7 A H H >> S+ 0 0 12 1,-0.2 4,-2.4 2,-0.2 3,-1.3 0.972 107.3 47.5 -50.7 -66.9 5.6 15.6 -135.9 7 8 A R H 3X S+ 0 0 105 -4,-1.8 4,-1.6 1,-0.3 -1,-0.2 0.822 106.7 58.3 -45.7 -43.1 3.2 12.8 -134.9 8 9 A D H 3X S+ 0 0 85 -4,-2.3 4,-0.7 1,-0.2 -1,-0.3 0.893 112.3 40.7 -57.6 -39.8 5.7 10.1 -135.5 9 10 A F H << S+ 0 0 2 -4,-1.6 3,-0.4 -3,-1.3 -2,-0.2 0.871 116.8 47.6 -76.7 -37.6 8.0 11.7 -133.0 10 11 A V H < S+ 0 0 26 -4,-2.4 -2,-0.2 1,-0.2 -1,-0.2 0.637 101.2 71.2 -78.6 -10.8 5.2 12.5 -130.5 11 12 A A H < S+ 0 0 71 -4,-1.6 -1,-0.2 -5,-0.3 -2,-0.2 0.873 107.2 10.3 -74.3 -36.8 3.9 9.0 -130.9 12 13 A E S < S- 0 0 103 -4,-0.7 -1,-0.1 -3,-0.4 75,-0.1 -0.947 92.5 -71.4-143.7 162.0 6.7 7.1 -129.0 13 14 A P - 0 0 77 0, 0.0 3,-0.2 0, 0.0 4,-0.1 -0.259 39.2-135.3 -53.2 127.4 9.7 7.6 -126.8 14 15 A M > + 0 0 7 1,-0.2 3,-3.1 2,-0.1 2,-0.5 0.860 43.8 160.7 -56.3 -34.6 12.6 9.1 -128.8 15 16 A G T 3 S- 0 0 48 1,-0.3 27,-0.2 26,-0.1 -1,-0.2 -0.310 77.7 -14.9 52.4-105.1 15.0 6.6 -127.2 16 17 A E T 3 S+ 0 0 122 -2,-0.5 -1,-0.3 -3,-0.2 25,-0.1 0.254 92.9 143.4-112.5 10.6 17.9 6.8 -129.7 17 18 A K < - 0 0 39 -3,-3.1 24,-1.3 -4,-0.1 25,-0.5 -0.152 54.5-110.5 -50.7 144.0 16.2 8.5 -132.6 18 19 A P > - 0 0 63 0, 0.0 3,-2.4 0, 0.0 4,-0.3 -0.351 25.5-106.4 -76.2 162.0 18.5 10.9 -134.4 19 20 A V G > S+ 0 0 0 1,-0.3 3,-2.4 2,-0.2 6,-0.2 0.827 117.9 69.1 -57.4 -32.3 18.1 14.6 -134.3 20 21 A G G 3 S+ 0 0 29 1,-0.3 -1,-0.3 10,-0.1 4,-0.1 0.654 86.6 68.7 -62.5 -11.6 16.8 14.5 -137.9 21 22 A S G < S+ 0 0 33 -3,-2.4 -1,-0.3 2,-0.1 2,-0.2 0.650 78.9 104.6 -80.5 -13.7 13.8 12.7 -136.5 22 23 A L S X S- 0 0 0 -3,-2.4 3,-2.1 -4,-0.3 54,-0.1 -0.472 85.8-106.5 -70.0 134.2 12.8 16.0 -134.8 23 24 A A T 3 S+ 0 0 0 1,-0.3 56,-0.2 52,-0.2 57,-0.1 -0.375 107.8 21.3 -60.2 133.4 10.0 17.9 -136.4 24 25 A G T 3 S+ 0 0 21 1,-0.2 2,-0.7 51,-0.2 -1,-0.3 0.174 101.1 105.5 93.4 -17.7 11.4 20.9 -138.2 25 26 A I < + 0 0 2 -3,-2.1 -1,-0.2 -6,-0.2 2,-0.1 -0.864 43.9 167.1-103.2 114.9 14.9 19.4 -138.4 26 27 A G > - 0 0 38 -2,-0.7 4,-2.2 -3,-0.1 5,-0.3 -0.221 54.7 -70.5-106.9-160.2 16.0 18.2 -141.8 27 28 A E H > S+ 0 0 182 3,-0.2 4,-1.7 2,-0.2 5,-0.1 0.862 128.6 45.9 -64.5 -37.8 19.3 17.1 -143.3 28 29 A V H > S+ 0 0 104 2,-0.2 4,-1.7 3,-0.1 -1,-0.2 0.962 121.4 34.3 -70.4 -55.4 20.8 20.6 -143.4 29 30 A L H > S+ 0 0 15 2,-0.2 4,-2.5 1,-0.2 5,-0.2 0.971 117.8 54.2 -63.2 -54.9 19.8 21.8 -139.9 30 31 A G H X S+ 0 0 4 -4,-2.2 4,-2.4 1,-0.2 5,-0.2 0.907 105.4 54.9 -44.9 -51.6 20.3 18.3 -138.5 31 32 A K H X S+ 0 0 119 -4,-1.7 4,-2.1 -5,-0.3 -1,-0.2 0.941 109.1 45.2 -49.0 -58.8 23.8 18.1 -139.9 32 33 A K H X S+ 0 0 94 -4,-1.7 4,-2.4 1,-0.2 -1,-0.2 0.885 109.4 57.1 -54.7 -42.4 24.9 21.4 -138.2 33 34 A L H <>S+ 0 0 0 -4,-2.5 5,-0.9 1,-0.2 4,-0.5 0.935 106.0 49.4 -54.9 -49.3 23.3 20.3 -134.9 34 35 A E H ><5S+ 0 0 69 -4,-2.4 3,-1.7 1,-0.2 -1,-0.2 0.934 110.9 50.2 -55.7 -47.9 25.3 17.1 -134.8 35 36 A E H 3<5S+ 0 0 133 -4,-2.1 -1,-0.2 1,-0.3 -2,-0.2 0.864 105.0 56.1 -59.9 -38.3 28.5 19.1 -135.5 36 37 A R T 3<5S- 0 0 163 -4,-2.4 -1,-0.3 2,-0.2 -2,-0.2 0.539 129.4 -98.5 -70.9 -7.1 27.6 21.6 -132.7 37 38 A G T < 5S+ 0 0 42 -3,-1.7 2,-1.9 -4,-0.5 -3,-0.2 -0.168 96.0 112.2 119.4 -40.9 27.5 18.5 -130.5 38 39 A F < + 0 0 35 -5,-0.9 -2,-0.2 1,-0.2 -1,-0.2 -0.497 32.8 155.3 -70.6 88.2 23.8 17.8 -130.3 39 40 A D + 0 0 85 -2,-1.9 2,-0.3 -5,-0.2 -1,-0.2 0.034 53.8 51.8-106.6 24.6 24.0 14.6 -132.2 40 41 A K S >> S- 0 0 48 -22,-0.2 3,-2.1 1,-0.1 4,-1.4 -0.923 79.3-123.1-161.7 133.7 20.9 12.9 -130.8 41 42 A A H >> S+ 0 0 0 -24,-1.3 4,-2.2 -2,-0.3 3,-0.6 0.889 113.8 56.7 -43.5 -48.0 17.3 14.0 -130.4 42 43 A Y H 3> S+ 0 0 109 -25,-0.5 4,-1.8 1,-0.3 -1,-0.3 0.822 100.6 58.3 -58.0 -28.2 17.5 13.4 -126.7 43 44 A V H <> S+ 0 0 39 -3,-2.1 4,-1.7 2,-0.2 -1,-0.3 0.923 106.3 47.6 -67.3 -39.5 20.4 15.8 -126.5 44 45 A V H S+ 0 0 2 -4,-2.4 5,-2.5 2,-0.2 6,-0.3 0.964 112.8 44.6 -62.0 -51.8 14.9 22.1 -124.1 49 50 A L H ><5S+ 0 0 61 -4,-3.0 3,-1.6 1,-0.2 -2,-0.2 0.885 110.2 54.9 -59.7 -42.7 14.6 20.9 -120.5 50 51 A V H 3<5S+ 0 0 103 -4,-2.6 -1,-0.2 1,-0.3 -2,-0.2 0.926 104.4 53.5 -58.4 -44.9 17.6 23.0 -119.5 51 52 A L T ><5S- 0 0 36 -4,-2.3 3,-2.9 -5,-0.1 -1,-0.3 0.102 119.6-117.5 -78.9 27.3 15.9 26.1 -120.9 52 53 A K T < 5 - 0 0 180 -3,-1.6 -3,-0.2 1,-0.3 -2,-0.1 0.731 60.0 -67.0 42.9 33.8 13.0 25.0 -118.7 53 54 A K T 3 - 0 0 69 -3,-2.9 4,-2.5 -6,-0.3 5,-0.3 -0.441 31.5-149.5 -65.7 123.5 10.7 28.3 -122.6 55 56 A E H > S+ 0 0 70 -2,-0.3 4,-3.0 2,-0.2 5,-0.3 0.961 91.0 40.9 -57.6 -60.9 9.6 28.8 -126.1 56 57 A D H > S+ 0 0 119 1,-0.2 4,-2.8 2,-0.2 5,-0.3 0.949 116.7 49.2 -55.4 -52.5 11.5 31.9 -127.0 57 58 A L H > S+ 0 0 90 1,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.919 116.5 42.2 -52.7 -50.1 14.7 30.9 -125.3 58 59 A F H X S+ 0 0 0 -4,-2.5 4,-2.7 2,-0.2 3,-0.2 0.953 115.9 46.7 -62.4 -54.1 14.6 27.5 -127.0 59 60 A R H X S+ 0 0 47 -4,-3.0 4,-2.4 -5,-0.3 -1,-0.2 0.841 113.6 50.4 -58.6 -34.2 13.6 28.6 -130.4 60 61 A E H X S+ 0 0 102 -4,-2.8 4,-1.5 -5,-0.3 -1,-0.3 0.833 109.1 51.5 -74.4 -31.6 16.2 31.4 -130.2 61 62 A W H X S+ 0 0 40 -4,-1.7 4,-1.6 -5,-0.3 -2,-0.2 0.918 110.5 49.1 -68.9 -44.3 18.8 28.8 -129.2 62 63 A L H >X>S+ 0 0 0 -4,-2.7 4,-2.6 1,-0.2 5,-1.3 0.982 110.1 49.6 -56.8 -59.9 17.9 26.7 -132.2 63 64 A K H 3<5S+ 0 0 133 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.806 114.5 47.0 -48.8 -35.8 18.1 29.6 -134.6 64 65 A D H 3<5S+ 0 0 95 -4,-1.5 -1,-0.3 -5,-0.1 -2,-0.2 0.731 117.1 42.6 -81.8 -21.9 21.4 30.5 -133.2 65 66 A T H <<5S+ 0 0 15 -4,-1.6 -2,-0.2 -3,-1.2 -3,-0.2 0.903 135.6 2.9 -92.9 -47.8 22.8 26.9 -133.3 66 67 A C T <5S- 0 0 3 -4,-2.6 -3,-0.2 -5,-0.2 -34,-0.2 0.517 98.5-110.0-117.1 -12.2 21.8 25.4 -136.6 67 68 A G < + 0 0 45 -5,-1.3 -4,-0.2 1,-0.1 -3,-0.1 0.725 51.0 172.3 90.3 24.4 20.0 28.3 -138.3 68 69 A A - 0 0 4 -6,-0.4 2,-0.2 1,-0.1 -1,-0.1 -0.122 21.3-134.9 -59.5 163.9 16.4 27.1 -138.2 69 70 A N > - 0 0 77 -7,-0.0 4,-3.3 1,-0.0 5,-0.5 -0.492 34.2 -75.3-112.3-172.9 13.7 29.6 -139.2 70 71 A A H > S+ 0 0 62 1,-0.2 4,-1.7 2,-0.2 5,-0.1 0.893 131.8 37.2 -48.3 -52.3 10.3 30.7 -137.9 71 72 A K H > S+ 0 0 123 2,-0.2 4,-2.6 3,-0.2 -1,-0.2 0.907 117.3 53.0 -70.5 -40.6 8.5 27.5 -139.0 72 73 A Q H > S+ 0 0 59 2,-0.2 4,-2.6 1,-0.2 5,-0.2 0.951 113.8 39.0 -59.6 -54.9 11.4 25.3 -138.2 73 74 A S H X S+ 0 0 8 -4,-3.3 4,-2.8 1,-0.2 5,-0.2 0.896 114.2 56.0 -65.4 -39.1 11.9 26.3 -134.6 74 75 A R H X S+ 0 0 110 -4,-1.7 4,-2.7 -5,-0.5 5,-0.2 0.950 112.8 41.2 -57.2 -49.2 8.2 26.6 -134.1 75 76 A D H X S+ 0 0 42 -4,-2.6 4,-1.9 2,-0.2 -52,-0.2 0.898 114.3 50.4 -67.0 -42.8 7.7 22.9 -135.2 76 77 A C H X S+ 0 0 0 -4,-2.6 4,-2.3 -5,-0.2 -53,-0.2 0.934 114.9 45.8 -60.4 -45.6 10.8 21.6 -133.4 77 78 A F H X S+ 0 0 10 -4,-2.8 4,-3.3 2,-0.2 5,-0.3 0.979 113.3 45.8 -59.8 -62.3 9.6 23.3 -130.2 78 79 A G H X S+ 0 0 10 -4,-2.7 4,-1.9 -5,-0.2 -1,-0.2 0.817 111.1 58.4 -52.5 -31.2 6.0 22.3 -130.4 79 80 A C H X S+ 0 0 0 -4,-1.9 4,-2.0 -5,-0.2 -1,-0.2 0.977 111.9 36.3 -62.4 -58.5 7.3 18.8 -131.2 80 81 A L H X S+ 0 0 0 -4,-2.3 4,-2.7 1,-0.2 5,-0.3 0.923 112.2 60.3 -62.4 -45.5 9.4 18.5 -128.0 81 82 A R H X S+ 0 0 111 -4,-3.3 4,-1.7 1,-0.2 -1,-0.2 0.901 110.6 42.4 -49.7 -43.3 6.8 20.3 -125.9 82 83 A E H X S+ 0 0 72 -4,-1.9 4,-1.1 -5,-0.3 -1,-0.2 0.870 108.8 56.2 -73.5 -37.3 4.3 17.6 -126.8 83 84 A W H X S+ 0 0 26 -4,-2.0 4,-1.9 1,-0.2 5,-0.4 0.921 109.4 48.7 -59.7 -42.8 6.6 14.7 -126.4 84 85 A C H X S+ 0 0 3 -4,-2.7 4,-1.3 1,-0.3 -1,-0.2 0.903 107.9 51.9 -63.9 -44.1 7.2 15.9 -122.8 85 86 A D H < S+ 0 0 123 -4,-1.7 -1,-0.3 -5,-0.3 -2,-0.2 0.737 115.9 45.9 -65.0 -17.9 3.6 16.3 -122.1 86 87 A A H < S+ 0 0 53 -4,-1.1 -2,-0.2 -3,-0.4 -1,-0.2 0.749 134.4 2.8 -96.2 -26.9 3.3 12.7 -123.3 87 88 A F H < 0 0 82 -4,-1.9 -3,-0.2 -5,-0.1 -2,-0.2 0.646 360.0 360.0-133.6 -26.6 6.2 11.0 -121.6 88 89 A L < 0 0 135 -4,-1.3 -3,-0.2 -5,-0.4 -4,-0.1 0.982 360.0 360.0 -70.8 360.0 8.1 13.2 -119.2