==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN, PROTEIN TRANSPORT 18-JAN-08 3BZZ . COMPND 2 MOLECULE: ESCU; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR R.ZARIVACH,W.DENG,M.VUCKOVIC,H.B.FELISE,H.V.NGUYEN,S.I.MILLE . 100 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5905.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 71 71.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 15.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 9.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 36 36.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 244 A I 0 0 208 0, 0.0 47,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 123.1 -2.1 4.5 35.7 2 245 A Q - 0 0 81 1,-0.1 2,-0.1 2,-0.1 46,-0.0 -0.076 360.0-106.2 -59.6 153.5 -3.8 4.2 32.3 3 246 A S > - 0 0 55 1,-0.1 3,-1.5 2,-0.0 4,-0.4 -0.453 27.1-113.2 -75.6 154.1 -4.2 7.3 30.1 4 247 A G T 3 S+ 0 0 88 1,-0.2 4,-0.4 2,-0.1 3,-0.1 0.673 115.1 54.2 -58.4 -19.4 -7.6 8.8 29.7 5 248 A S T 3> S+ 0 0 54 1,-0.1 4,-2.3 2,-0.1 -1,-0.2 0.531 82.4 89.2 -93.6 -8.3 -7.7 7.8 26.0 6 249 A L H <> S+ 0 0 2 -3,-1.5 4,-2.3 1,-0.2 5,-0.2 0.933 88.0 45.2 -59.3 -52.3 -7.0 4.1 26.5 7 250 A A H > S+ 0 0 22 -4,-0.4 4,-2.6 1,-0.2 -1,-0.2 0.915 113.0 51.0 -61.6 -41.9 -10.6 2.9 26.8 8 251 A N H > S+ 0 0 110 -4,-0.4 4,-1.5 1,-0.2 -1,-0.2 0.890 110.0 50.4 -63.2 -39.6 -11.8 5.0 23.9 9 252 A N H X S+ 0 0 30 -4,-2.3 4,-0.8 2,-0.2 -1,-0.2 0.904 111.1 48.3 -65.4 -41.4 -9.0 3.6 21.7 10 253 A I H >< S+ 0 0 0 -4,-2.3 3,-1.2 1,-0.2 -2,-0.2 0.945 110.5 50.8 -60.8 -47.0 -9.9 0.0 22.6 11 254 A K H 3< S+ 0 0 116 -4,-2.6 -1,-0.2 1,-0.3 -2,-0.2 0.786 110.7 50.1 -63.7 -30.0 -13.6 0.6 21.9 12 255 A K H 3< S+ 0 0 98 -4,-1.5 -1,-0.3 -5,-0.2 -2,-0.2 0.609 89.3 113.1 -77.2 -18.0 -12.7 2.1 18.5 13 256 A S << - 0 0 10 -3,-1.2 16,-0.2 -4,-0.8 3,-0.1 -0.220 55.2-157.0 -69.5 146.6 -10.5 -0.9 17.6 14 257 A T S S- 0 0 27 14,-2.8 2,-0.3 1,-0.4 15,-0.2 0.850 79.6 -10.8 -83.9 -41.9 -11.4 -3.3 14.8 15 258 A V E -A 28 0A 0 13,-1.6 13,-2.8 46,-0.1 2,-0.4 -0.978 58.2-144.9-156.9 149.0 -9.2 -6.1 16.3 16 259 A I E -Ab 27 63A 0 46,-2.3 48,-2.8 -2,-0.3 2,-0.4 -0.972 14.2-159.1-116.2 131.7 -6.6 -6.5 18.9 17 260 A V E -Ab 26 64A 0 9,-2.5 9,-2.7 -2,-0.4 2,-0.3 -0.939 14.2-177.6-114.1 133.7 -3.7 -8.9 18.4 18 261 A K E Ab 25 65A 56 46,-2.4 48,-2.6 -2,-0.4 52,-0.3 -0.879 360.0 360.0-124.8 159.4 -1.7 -10.3 21.4 19 262 A N 0 0 41 5,-1.5 48,-0.1 -2,-0.3 46,-0.1 0.054 360.0 360.0 -91.3 360.0 1.3 -12.5 22.1 20 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 21 263 B P 0 0 74 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 163.1 8.4 -8.2 26.1 22 264 B T + 0 0 105 1,-0.2 2,-0.4 23,-0.0 23,-0.0 0.882 360.0 31.1 -61.4 -41.5 6.5 -10.9 28.0 23 265 B H + 0 0 65 -5,-0.0 23,-2.0 2,-0.0 2,-0.3 -0.979 67.8 174.2-122.0 139.5 3.1 -9.4 27.0 24 266 B I E - C 0 45A 1 -2,-0.4 -5,-1.5 21,-0.2 2,-0.4 -0.996 6.1-178.2-137.6 139.6 2.2 -7.4 23.9 25 267 B A E -AC 18 44A 0 19,-2.3 19,-1.9 -2,-0.3 2,-0.4 -0.987 5.2-169.3-138.7 130.7 -1.1 -6.0 22.7 26 268 B I E -AC 17 43A 0 -9,-2.7 -9,-2.5 -2,-0.4 2,-0.6 -0.984 10.4-151.1-120.1 126.6 -1.6 -4.2 19.4 27 269 B C E -AC 16 42A 0 15,-3.0 14,-2.3 -2,-0.4 15,-1.0 -0.872 14.9-164.2-101.8 117.8 -4.8 -2.3 18.6 28 270 B L E -AC 15 40A 0 -13,-2.8 -14,-2.8 -2,-0.6 -13,-1.6 -0.828 4.9-166.4-106.8 138.7 -5.6 -2.1 14.9 29 271 B Y E + C 0 39A 16 10,-2.8 10,-2.9 -2,-0.4 2,-0.4 -0.986 11.0 169.3-127.2 128.9 -8.2 0.2 13.3 30 272 B Y + 0 0 83 -2,-0.4 2,-0.4 8,-0.2 -2,-0.0 -0.990 3.6 171.4-140.5 129.1 -9.5 -0.1 9.8 31 273 B K >> - 0 0 112 -2,-0.4 3,-2.4 6,-0.1 4,-2.3 -0.949 38.4-117.2-139.9 113.9 -12.4 1.8 8.3 32 274 B L T 34 S+ 0 0 147 -2,-0.4 -2,-0.0 1,-0.3 5,-0.0 -0.278 100.5 15.4 -52.5 129.7 -13.1 1.6 4.6 33 275 B G T 34 S+ 0 0 85 2,-0.3 -1,-0.3 1,-0.1 0, 0.0 0.085 126.4 56.8 94.0 -22.2 -12.7 5.0 3.0 34 276 B E T <4 S+ 0 0 103 -3,-2.4 -2,-0.2 1,-0.3 3,-0.1 0.817 104.6 42.6-106.6 -52.0 -10.9 6.5 6.0 35 277 B T < - 0 0 5 -4,-2.3 -1,-0.3 1,-0.2 -2,-0.3 -0.843 60.6-165.9-101.7 108.4 -7.8 4.3 6.6 36 278 B P S S+ 0 0 102 0, 0.0 -1,-0.2 0, 0.0 -6,-0.0 0.858 84.6 14.2 -61.8 -30.1 -6.1 3.4 3.3 37 279 B L S S- 0 0 55 -3,-0.1 -6,-0.1 -8,-0.1 -8,-0.1 -0.932 107.3 -76.0-132.5 158.2 -4.2 0.7 5.3 38 280 B P - 0 0 13 0, 0.0 45,-2.4 0, 0.0 2,-0.4 -0.301 50.3-143.3 -54.3 140.8 -4.8 -0.7 8.8 39 281 B L E -CD 29 82A 31 -10,-2.9 -10,-2.8 43,-0.2 2,-0.8 -0.908 8.0-135.5-113.8 130.8 -3.7 1.8 11.5 40 282 B V E +C 28 0A 0 41,-2.6 40,-2.8 -2,-0.4 -12,-0.2 -0.804 30.9 170.0 -83.8 113.7 -2.1 0.9 14.9 41 283 B I E + 0 0 21 -14,-2.3 2,-0.3 -2,-0.8 -1,-0.2 0.582 61.5 11.3-100.7 -14.1 -4.0 3.2 17.3 42 284 B E E +C 27 0A 0 -15,-1.0 -15,-3.0 -33,-0.1 -1,-0.3 -0.967 61.0 179.7-163.5 144.1 -2.8 1.8 20.6 43 285 B T E -C 26 0A 24 -2,-0.3 2,-0.3 -17,-0.2 -17,-0.2 -0.961 2.6-179.7-141.7 163.4 -0.1 -0.5 21.8 44 286 B G E -C 25 0A 3 -19,-1.9 -19,-2.3 -2,-0.3 2,-0.3 -0.974 12.5-155.3-159.6 151.9 1.1 -1.9 25.1 45 287 B K E >> -C 24 0A 107 -2,-0.3 3,-1.3 -21,-0.2 4,-1.0 -0.856 64.9 -21.8-118.5 161.8 3.7 -4.1 26.7 46 288 B D H 3> S+ 0 0 61 -23,-2.0 4,-2.2 -2,-0.3 3,-0.2 -0.064 134.1 10.0 42.4-120.5 3.6 -6.0 30.0 47 289 B A H 3> S+ 0 0 79 1,-0.3 4,-2.2 2,-0.2 -1,-0.3 0.897 134.9 48.0 -58.7 -41.5 1.1 -4.4 32.5 48 290 B K H <> S+ 0 0 79 -3,-1.3 4,-2.5 1,-0.2 -1,-0.3 0.889 109.8 53.2 -65.7 -37.6 -0.4 -2.1 29.9 49 291 B A H X S+ 0 0 0 -4,-1.0 4,-2.4 -3,-0.2 -1,-0.2 0.927 108.9 49.6 -59.0 -43.0 -0.8 -5.0 27.4 50 292 B L H X S+ 0 0 61 -4,-2.2 4,-2.2 1,-0.2 -2,-0.2 0.896 109.9 51.2 -67.0 -36.5 -2.6 -7.0 30.1 51 293 B Q H X S+ 0 0 77 -4,-2.2 4,-2.7 -5,-0.2 5,-0.3 0.922 109.2 50.4 -64.8 -43.1 -4.9 -4.0 30.7 52 294 B I H X S+ 0 0 0 -4,-2.5 4,-2.5 1,-0.2 -2,-0.2 0.931 111.2 49.0 -57.9 -45.5 -5.7 -3.7 27.0 53 295 B I H X S+ 0 0 30 -4,-2.4 4,-1.6 2,-0.2 -1,-0.2 0.901 113.9 45.3 -64.7 -41.0 -6.5 -7.4 26.7 54 296 B K H X S+ 0 0 127 -4,-2.2 4,-1.8 2,-0.2 -1,-0.2 0.923 114.4 47.1 -71.6 -42.1 -8.8 -7.3 29.8 55 297 B L H X S+ 0 0 17 -4,-2.7 4,-2.3 -5,-0.2 -2,-0.2 0.892 106.2 60.4 -66.2 -35.5 -10.6 -4.1 28.7 56 298 B A H <>S+ 0 0 0 -4,-2.5 5,-2.8 -5,-0.3 4,-0.3 0.924 106.5 46.0 -56.2 -45.9 -11.0 -5.5 25.2 57 299 B E H ><5S+ 0 0 153 -4,-1.6 3,-1.2 1,-0.2 -1,-0.2 0.915 110.2 54.0 -62.8 -41.7 -13.0 -8.4 26.5 58 300 B L H 3<5S+ 0 0 126 -4,-1.8 -2,-0.2 1,-0.3 -1,-0.2 0.873 114.6 41.2 -59.0 -36.5 -15.1 -6.0 28.7 59 301 B Y T 3<5S- 0 0 71 -4,-2.3 -1,-0.3 -5,-0.1 -2,-0.2 0.261 113.5-115.1-100.2 11.0 -15.9 -3.9 25.6 60 302 B D T < 5 + 0 0 148 -3,-1.2 -3,-0.2 -4,-0.3 -4,-0.1 0.832 61.1 152.8 61.6 35.4 -16.5 -6.9 23.3 61 303 B I < - 0 0 21 -5,-2.8 -1,-0.2 -6,-0.2 -46,-0.1 -0.846 51.9-106.9 -95.2 129.8 -13.6 -6.1 21.0 62 304 B P - 0 0 39 0, 0.0 -46,-2.3 0, 0.0 2,-0.5 -0.301 33.9-165.1 -60.5 133.2 -12.1 -9.2 19.2 63 305 B V E -b 16 0A 47 -48,-0.2 2,-0.4 35,-0.0 -46,-0.2 -0.992 2.9-167.6-120.5 124.5 -8.8 -10.3 20.6 64 306 B I E -b 17 0A 30 -48,-2.8 -46,-2.4 -2,-0.5 2,-0.7 -0.949 17.7-137.1-115.3 131.2 -6.6 -12.8 18.6 65 307 B E E +b 18 0A 132 -2,-0.4 2,-0.2 -48,-0.2 -46,-0.2 -0.780 40.7 149.5 -83.9 116.1 -3.6 -14.6 19.9 66 308 B D > - 0 0 58 -48,-2.6 4,-2.8 -2,-0.7 5,-0.3 -0.762 22.3-172.7-148.7 90.5 -0.9 -14.5 17.2 67 309 B I H > S+ 0 0 71 -2,-0.2 4,-2.4 1,-0.2 5,-0.2 0.944 82.0 44.1 -61.1 -50.5 2.5 -14.5 18.8 68 310 B P H > S+ 0 0 96 0, 0.0 4,-2.2 0, 0.0 -1,-0.2 0.915 117.1 45.2 -60.3 -43.6 4.6 -13.9 15.7 69 311 B L H > S+ 0 0 14 2,-0.2 4,-2.7 1,-0.2 5,-0.3 0.935 114.6 47.4 -69.1 -46.8 2.4 -11.2 14.3 70 312 B A H X S+ 0 0 0 -4,-2.8 4,-2.4 -52,-0.3 -1,-0.2 0.918 113.6 49.4 -57.4 -44.3 2.0 -9.3 17.6 71 313 B T H X S+ 0 0 62 -4,-2.4 4,-1.8 -5,-0.3 -2,-0.2 0.922 113.9 43.9 -62.1 -43.9 5.7 -9.5 18.2 72 314 B S H X S+ 0 0 44 -4,-2.2 4,-1.9 -5,-0.2 5,-0.3 0.903 113.4 50.8 -72.2 -40.6 6.7 -8.2 14.8 73 315 B L H X S+ 0 0 0 -4,-2.7 4,-3.0 -5,-0.2 -1,-0.2 0.939 109.5 51.8 -58.2 -45.0 4.0 -5.4 14.8 74 316 B Y H < S+ 0 0 68 -4,-2.4 -2,-0.2 -5,-0.3 -1,-0.2 0.913 113.0 44.4 -60.6 -41.2 5.3 -4.3 18.3 75 317 B K H < S+ 0 0 166 -4,-1.8 -1,-0.2 -5,-0.2 -2,-0.2 0.832 127.8 25.5 -71.0 -31.7 8.9 -4.1 17.1 76 318 B N H < S+ 0 0 79 -4,-1.9 2,-0.6 1,-0.2 -2,-0.2 0.755 110.4 56.7-111.8 -31.9 8.1 -2.3 13.8 77 319 B I < - 0 0 3 -4,-3.0 -1,-0.2 -5,-0.3 3,-0.1 -0.924 68.6-153.3-115.0 111.6 4.9 -0.3 13.8 78 320 B H > - 0 0 115 -2,-0.6 3,-2.3 1,-0.2 -38,-0.3 -0.364 37.1 -77.4 -80.9 158.5 4.5 2.4 16.5 79 321 B K T 3 S+ 0 0 94 1,-0.3 -38,-0.2 -5,-0.1 -1,-0.2 -0.328 121.7 25.0 -50.2 129.4 1.4 3.7 18.0 80 322 B G T 3 S+ 0 0 55 -40,-2.8 2,-0.3 1,-0.3 -1,-0.3 0.284 100.0 113.3 93.8 -7.1 -0.2 6.1 15.4 81 323 B Q < - 0 0 90 -3,-2.3 -41,-2.6 -41,-0.2 -1,-0.3 -0.718 66.5-119.1-100.4 147.0 1.4 4.5 12.3 82 324 B Y B -D 39 0A 98 -2,-0.3 -43,-0.2 -43,-0.2 -4,-0.1 -0.494 41.0-101.0 -68.7 146.6 -0.0 2.7 9.4 83 325 B I - 0 0 3 -45,-2.4 2,-0.2 -2,-0.2 -1,-0.1 -0.328 39.8-125.7 -61.7 156.0 1.1 -0.9 8.9 84 326 B T > - 0 0 62 -3,-0.1 3,-2.7 -47,-0.0 4,-0.4 -0.571 31.3 -85.8-105.1 171.5 3.8 -1.4 6.3 85 327 B E G > S+ 0 0 159 1,-0.3 3,-1.4 2,-0.2 4,-0.5 0.756 121.0 61.5 -51.4 -40.5 3.9 -3.7 3.2 86 328 B D G 3 S+ 0 0 96 1,-0.3 -1,-0.3 2,-0.1 3,-0.0 0.715 109.8 44.5 -57.1 -24.2 5.3 -6.8 5.0 87 329 B F G <> S+ 0 0 7 -3,-2.7 4,-2.5 2,-0.1 5,-0.4 0.488 85.2 94.7-100.8 -5.6 2.1 -6.7 7.2 88 330 B F H <> S+ 0 0 81 -3,-1.4 4,-2.4 -4,-0.4 5,-0.2 0.944 90.4 37.6 -58.5 -54.3 -0.6 -6.1 4.6 89 331 B E H > S+ 0 0 126 -4,-0.5 4,-2.2 2,-0.2 5,-0.2 0.949 118.0 47.1 -66.4 -50.8 -1.5 -9.8 4.0 90 332 B P H > S+ 0 0 54 0, 0.0 4,-2.0 0, 0.0 -1,-0.2 0.892 116.3 45.1 -60.8 -38.4 -1.3 -11.1 7.6 91 333 B V H X S+ 0 0 0 -4,-2.5 4,-2.6 2,-0.2 -2,-0.2 0.893 109.4 54.5 -72.9 -37.3 -3.2 -8.2 9.0 92 334 B A H X S+ 0 0 29 -4,-2.4 4,-2.1 -5,-0.4 -1,-0.2 0.913 111.1 47.5 -54.8 -43.3 -5.9 -8.3 6.3 93 335 B Q H X S+ 0 0 93 -4,-2.2 4,-2.4 2,-0.2 -2,-0.2 0.895 109.8 52.5 -63.9 -45.2 -6.4 -12.0 7.2 94 336 B L H X S+ 0 0 4 -4,-2.0 4,-2.3 1,-0.2 -2,-0.2 0.922 109.4 49.6 -56.5 -48.1 -6.5 -11.1 10.9 95 337 B I H X S+ 0 0 18 -4,-2.6 4,-3.3 2,-0.2 5,-0.2 0.905 109.5 50.6 -61.8 -41.7 -9.2 -8.5 10.2 96 338 B R H X S+ 0 0 107 -4,-2.1 4,-2.2 2,-0.2 -2,-0.2 0.908 109.5 50.6 -67.8 -36.9 -11.3 -11.0 8.2 97 339 B I H X S+ 0 0 75 -4,-2.4 4,-0.6 2,-0.2 -1,-0.2 0.934 115.4 44.0 -57.6 -46.7 -11.1 -13.6 11.0 98 340 B A H >< S+ 0 0 6 -4,-2.3 3,-0.9 1,-0.2 -2,-0.2 0.923 116.4 45.5 -64.5 -45.7 -12.2 -10.8 13.4 99 341 B I H 3< S+ 0 0 119 -4,-3.3 -1,-0.2 1,-0.2 -2,-0.2 0.749 103.9 63.8 -72.6 -25.6 -15.0 -9.5 11.1 100 342 B D H 3< 0 0 139 -4,-2.2 -1,-0.2 -5,-0.2 -2,-0.2 0.699 360.0 360.0 -68.2 -21.3 -16.2 -13.1 10.3 101 343 B L << 0 0 166 -3,-0.9 -1,-0.2 -4,-0.6 -2,-0.2 0.882 360.0 360.0 -69.8 360.0 -17.1 -13.4 14.0