==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 06-APR-99 1C6R . COMPND 2 MOLECULE: CYTOCHROME C6; . SOURCE 2 ORGANISM_SCIENTIFIC: SCENEDESMUS OBLIQUUS; . AUTHOR J.SCHNACKENBERG,M.E.THAN,K.MANN,G.WIEGAND,R.HUBER,W.REUTER . 88 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4945.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 68.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 10.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 39 44.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A A 0 0 113 0, 0.0 2,-1.5 0, 0.0 3,-0.2 0.000 360.0 360.0 360.0 147.4 6.7 5.9 24.2 2 3 A D > + 0 0 95 1,-0.2 4,-2.3 68,-0.2 76,-0.1 -0.683 360.0 171.9 -86.9 83.1 4.7 3.1 22.6 3 4 A L H > S+ 0 0 65 -2,-1.5 4,-2.7 2,-0.2 -1,-0.2 0.809 73.0 60.7 -65.6 -30.7 7.2 2.3 19.9 4 5 A A H > S+ 0 0 63 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.946 108.9 43.0 -62.3 -46.4 5.3 -0.8 18.8 5 6 A L H > S+ 0 0 58 1,-0.2 4,-2.8 2,-0.2 5,-0.3 0.946 112.3 55.0 -64.0 -46.3 2.2 1.4 18.0 6 7 A G H X S+ 0 0 0 -4,-2.3 4,-2.4 1,-0.2 -2,-0.2 0.900 106.6 50.1 -54.1 -45.3 4.5 4.0 16.4 7 8 A K H X S+ 0 0 74 -4,-2.7 4,-2.5 2,-0.2 -1,-0.2 0.937 113.6 43.4 -62.2 -47.8 6.0 1.4 14.0 8 9 A Q H X S+ 0 0 114 -4,-1.9 4,-2.3 2,-0.2 -1,-0.2 0.881 112.8 52.8 -67.4 -35.0 2.7 0.0 12.8 9 10 A T H X S+ 0 0 12 -4,-2.8 4,-2.2 -5,-0.2 5,-0.4 0.914 110.9 49.7 -63.5 -39.4 1.3 3.6 12.5 10 11 A F H X>S+ 0 0 7 -4,-2.4 4,-2.5 -5,-0.3 5,-1.4 0.949 111.4 45.3 -63.7 -52.7 4.3 4.4 10.4 11 12 A E H <5S+ 0 0 105 -4,-2.5 4,-0.2 1,-0.2 -1,-0.2 0.889 117.7 46.4 -58.7 -41.4 4.0 1.4 8.0 12 13 A A H <5S+ 0 0 79 -4,-2.3 -1,-0.2 -5,-0.2 -2,-0.2 0.846 130.3 15.9 -71.0 -36.3 0.3 2.0 7.6 13 14 A N H <5S+ 0 0 55 -4,-2.2 -3,-0.2 -5,-0.2 -2,-0.2 0.775 130.1 31.6-113.0 -29.8 0.4 5.7 7.1 14 15 A C T >X5S+ 0 0 23 -4,-2.5 4,-2.2 -5,-0.4 3,-1.0 0.593 87.7 89.8-110.0 -13.5 3.9 7.0 6.1 15 16 A A H 3>< S+ 0 0 28 -4,-2.2 3,-2.2 5,-0.2 -2,-0.2 -0.045 71.9 157.0-128.1 33.9 9.1 7.5 3.5 19 20 A A G >< S+ 0 0 60 -4,-1.0 3,-1.5 1,-0.3 4,-0.0 -0.341 78.8 13.5 -59.6 137.8 9.8 3.8 3.0 20 21 A G G 3 S- 0 0 43 1,-0.3 -1,-0.3 2,-0.1 3,-0.1 0.627 131.7 -73.0 70.8 11.4 13.3 3.0 4.3 21 22 A G G < S+ 0 0 0 -3,-2.2 10,-3.0 1,-0.2 -1,-0.3 0.658 109.4 114.3 75.1 18.0 13.3 6.4 6.1 22 23 A N < - 0 0 83 -3,-1.5 2,-0.3 8,-0.2 -1,-0.2 0.065 66.4-113.3 -98.6-153.8 13.8 8.1 2.7 23 24 A N - 0 0 25 4,-0.2 -5,-0.2 7,-0.1 6,-0.1 -0.802 17.6-173.3-154.6 111.9 11.5 10.5 0.7 24 25 A S S S+ 0 0 84 -7,-2.1 -6,-0.1 -2,-0.3 -7,-0.1 0.670 88.3 45.7 -78.8 -17.3 9.9 9.7 -2.6 25 26 A V S S+ 0 0 79 -8,-0.4 -1,-0.1 1,-0.3 -7,-0.1 0.903 131.0 14.5 -91.2 -51.1 8.5 13.2 -3.2 26 27 A I S > S- 0 0 74 3,-0.1 3,-2.1 1,-0.1 -1,-0.3 -0.835 79.9-157.3-127.9 87.1 11.5 15.4 -2.3 27 28 A P T 3 S+ 0 0 99 0, 0.0 -4,-0.2 0, 0.0 3,-0.1 0.607 84.3 51.2 -38.5 -35.7 14.5 13.0 -2.2 28 29 A D T 3 S+ 0 0 91 1,-0.2 2,-1.5 -6,-0.1 11,-0.1 0.672 89.3 80.3 -85.7 -13.1 16.8 14.9 0.0 29 30 A H < + 0 0 66 -3,-2.1 -1,-0.2 -6,-0.1 -3,-0.1 -0.413 69.4 157.0 -89.4 59.7 14.3 15.5 2.8 30 31 A T - 0 0 22 -2,-1.5 -8,-0.2 -3,-0.1 9,-0.1 -0.138 56.9-109.6 -76.4 178.5 14.8 12.1 4.3 31 32 A L S S+ 0 0 21 -10,-3.0 2,-0.2 4,-0.1 -9,-0.1 0.082 76.9 122.4 -98.2 22.0 14.1 10.9 7.9 32 33 A R S > S- 0 0 64 -11,-0.2 4,-2.3 1,-0.1 3,-0.3 -0.599 74.2-114.5 -82.2 150.1 17.8 10.6 8.7 33 34 A K H > S+ 0 0 83 50,-0.5 4,-1.9 1,-0.2 -1,-0.1 0.907 113.5 47.1 -49.9 -53.0 19.1 12.6 11.6 34 35 A A H > S+ 0 0 61 1,-0.2 4,-1.1 2,-0.2 -1,-0.2 0.861 111.1 52.0 -61.4 -37.0 21.4 14.8 9.5 35 36 A A H >> S+ 0 0 9 -3,-0.3 4,-3.1 1,-0.2 3,-0.6 0.927 109.1 49.2 -67.2 -43.4 18.8 15.6 7.0 36 37 A M H 3X S+ 0 0 12 -4,-2.3 4,-2.2 1,-0.2 7,-0.3 0.854 103.9 60.6 -64.6 -33.3 16.2 16.6 9.6 37 38 A E H 3< S+ 0 0 108 -4,-1.9 -1,-0.2 -5,-0.2 -2,-0.2 0.848 116.3 33.5 -61.5 -31.7 18.8 18.9 11.2 38 39 A Q H << S+ 0 0 141 -4,-1.1 -2,-0.2 -3,-0.6 -1,-0.2 0.868 131.8 26.6 -88.1 -48.4 19.0 20.8 7.9 39 40 A F H < S+ 0 0 72 -4,-3.1 2,-0.6 -5,-0.1 -3,-0.2 0.605 94.3 90.9 -98.5 -14.3 15.4 20.6 6.6 40 41 A L S >< S- 0 0 17 -4,-2.2 3,-2.5 -5,-0.3 2,-0.2 -0.763 78.7-120.3 -90.0 124.6 13.1 20.2 9.5 41 42 A Q T 3 S+ 0 0 116 -2,-0.6 11,-0.1 1,-0.3 -2,-0.1 -0.412 101.9 20.5 -60.1 120.7 11.8 23.5 10.9 42 43 A G T 3 S- 0 0 62 -2,-0.2 -1,-0.3 -5,-0.1 6,-0.2 0.263 115.8-104.2 101.9 -9.0 12.9 23.6 14.6 43 44 A G < - 0 0 20 -3,-2.5 2,-1.2 -7,-0.3 -6,-0.1 -0.306 63.2 -29.3 87.2-172.3 15.7 21.0 14.2 44 45 A F S S+ 0 0 24 -2,-0.1 2,-0.3 4,-0.1 -7,-0.1 -0.679 94.0 106.3 -86.9 92.4 16.0 17.4 15.2 45 46 A N S > S- 0 0 49 -2,-1.2 4,-2.0 1,-0.1 3,-0.2 -0.976 78.1-102.7-160.8 161.1 13.8 17.0 18.2 46 47 A L H > S+ 0 0 74 -2,-0.3 4,-2.8 1,-0.2 5,-0.2 0.857 116.7 55.0 -58.4 -40.2 10.4 15.5 19.3 47 48 A E H > S+ 0 0 139 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.918 109.4 46.7 -62.4 -43.8 8.6 18.9 19.3 48 49 A A H > S+ 0 0 8 2,-0.2 4,-1.9 -3,-0.2 -1,-0.2 0.912 114.2 47.8 -64.3 -44.4 9.6 19.7 15.7 49 50 A I H X S+ 0 0 9 -4,-2.0 4,-2.2 2,-0.2 5,-0.2 0.966 112.0 48.6 -61.4 -51.0 8.6 16.3 14.5 50 51 A T H X S+ 0 0 41 -4,-2.8 4,-2.7 1,-0.2 5,-0.3 0.925 108.1 56.0 -57.6 -44.5 5.2 16.3 16.3 51 52 A Y H X S+ 0 0 128 -4,-2.3 4,-2.9 1,-0.2 5,-0.3 0.915 109.9 44.0 -54.3 -50.5 4.5 19.8 14.9 52 53 A Q H X S+ 0 0 46 -4,-1.9 4,-2.2 2,-0.2 -1,-0.2 0.847 112.5 51.5 -66.2 -35.4 5.0 18.7 11.3 53 54 A V H < S+ 0 0 20 -4,-2.2 10,-2.7 2,-0.2 11,-0.3 0.940 117.6 39.7 -67.8 -41.7 3.0 15.4 11.7 54 55 A E H < S+ 0 0 45 -4,-2.7 10,-1.7 9,-0.2 11,-0.2 0.969 130.4 25.9 -66.5 -56.4 0.1 17.4 13.2 55 56 A N H < S- 0 0 88 -4,-2.9 7,-0.2 -5,-0.3 -3,-0.2 0.702 96.4-139.9 -89.4 -20.3 0.1 20.4 11.0 56 57 A G < - 0 0 16 -4,-2.2 2,-0.2 -5,-0.3 6,-0.2 -0.057 3.4-131.0 82.6 169.3 1.7 19.3 7.7 57 58 A K B > -A 60 0A 100 3,-2.9 3,-2.5 1,-0.2 2,-0.2 -0.684 52.1 -58.9-166.5 105.5 4.2 21.1 5.4 58 59 A G T 3 S+ 0 0 82 1,-0.3 -1,-0.2 -2,-0.2 0, 0.0 -0.371 129.3 1.8 60.3-119.9 4.0 21.5 1.6 59 60 A A T 3 S+ 0 0 63 -2,-0.2 -1,-0.3 -3,-0.1 -3,-0.0 0.488 116.4 94.6 -76.7 -4.7 3.8 18.1 0.0 60 61 A M B < S-A 57 0A 37 -3,-2.5 -3,-2.9 -35,-0.0 0, 0.0 -0.836 79.1-135.2 -88.2 113.1 3.8 16.6 3.5 61 62 A P - 0 0 73 0, 0.0 2,-0.4 0, 0.0 -5,-0.3 -0.188 14.4-111.0 -66.8 162.6 0.1 16.1 4.5 62 63 A A - 0 0 48 -7,-0.2 3,-0.2 -6,-0.2 -8,-0.2 -0.838 24.7-169.0 -96.5 134.3 -1.3 17.1 7.9 63 64 A W >> + 0 0 43 -10,-2.7 4,-2.9 -2,-0.4 3,-2.0 0.424 60.3 98.6-106.3 0.6 -2.3 14.2 10.1 64 65 A S T 34 S+ 0 0 67 -10,-1.7 -1,-0.2 1,-0.3 -10,-0.1 0.794 89.2 48.1 -59.1 -27.3 -4.3 15.9 12.9 65 66 A G T 34 S+ 0 0 74 -3,-0.2 -1,-0.3 -11,-0.2 3,-0.1 0.126 120.8 34.8-101.7 26.5 -7.5 15.0 11.1 66 67 A T T <4 S+ 0 0 92 -3,-2.0 2,-0.3 1,-0.5 -2,-0.2 0.517 115.3 44.3-141.1 -43.2 -6.6 11.3 10.5 67 68 A L S < S- 0 0 14 -4,-2.9 -1,-0.5 -13,-0.1 2,-0.1 -0.851 78.1-128.3-111.3 146.5 -4.5 10.1 13.5 68 69 A D > - 0 0 70 -2,-0.3 4,-2.5 -3,-0.1 5,-0.2 -0.318 34.4 -92.3 -86.7 174.8 -5.4 10.9 17.2 69 70 A D H > S+ 0 0 123 1,-0.2 4,-2.3 2,-0.2 5,-0.2 0.871 125.0 47.9 -55.5 -46.9 -3.1 12.4 19.8 70 71 A D H > S+ 0 0 98 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.871 113.7 48.7 -65.3 -31.9 -1.8 9.0 21.2 71 72 A E H > S+ 0 0 60 2,-0.2 4,-2.3 1,-0.2 -2,-0.2 0.878 112.1 48.2 -72.6 -40.3 -1.2 7.8 17.6 72 73 A I H X S+ 0 0 2 -4,-2.5 4,-2.5 2,-0.2 5,-0.2 0.916 111.3 50.2 -66.5 -44.9 0.7 11.0 16.6 73 74 A A H X S+ 0 0 56 -4,-2.3 4,-2.4 -5,-0.2 5,-0.2 0.951 111.3 50.3 -57.3 -47.9 2.8 10.9 19.8 74 75 A A H X S+ 0 0 3 -4,-1.9 4,-2.0 1,-0.2 -2,-0.2 0.920 112.7 44.3 -57.2 -49.2 3.7 7.2 19.0 75 76 A V H X S+ 0 0 4 -4,-2.3 4,-2.4 2,-0.2 -1,-0.2 0.869 111.1 53.6 -67.3 -36.6 4.7 7.8 15.4 76 77 A A H X S+ 0 0 1 -4,-2.5 4,-2.4 1,-0.2 -1,-0.2 0.926 110.2 48.4 -63.5 -43.3 6.8 10.9 16.3 77 78 A A H X S+ 0 0 16 -4,-2.4 4,-2.9 -5,-0.2 -2,-0.2 0.893 109.7 52.3 -63.2 -41.5 8.7 8.9 18.9 78 79 A Y H X S+ 0 0 22 -4,-2.0 4,-3.0 2,-0.2 5,-0.2 0.956 109.9 48.3 -60.0 -49.2 9.3 6.1 16.4 79 80 A V H X S+ 0 0 11 -4,-2.4 4,-2.3 1,-0.2 5,-0.2 0.943 113.5 47.5 -58.2 -46.4 10.8 8.5 13.8 80 81 A Y H X S+ 0 0 78 -4,-2.4 4,-2.9 1,-0.2 5,-0.3 0.943 113.0 48.0 -60.0 -49.0 13.0 10.1 16.5 81 82 A D H X S+ 0 0 47 -4,-2.9 4,-1.9 1,-0.2 -2,-0.2 0.921 112.1 49.6 -57.5 -46.0 14.2 6.7 17.8 82 83 A Q H <>S+ 0 0 21 -4,-3.0 5,-2.8 -5,-0.2 6,-0.4 0.877 114.9 44.8 -60.2 -44.1 14.9 5.4 14.2 83 84 A A H ><5S+ 0 0 2 -4,-2.3 3,-0.7 -5,-0.2 -50,-0.5 0.931 113.6 46.4 -69.1 -47.7 16.9 8.6 13.3 84 85 A S H 3<5S+ 0 0 59 -4,-2.9 -2,-0.2 1,-0.3 -1,-0.2 0.776 123.1 35.2 -69.5 -28.0 19.0 8.9 16.5 85 86 A G T 3<5S- 0 0 44 -4,-1.9 -1,-0.3 -5,-0.3 -2,-0.2 0.362 107.1-128.5-103.1 4.9 19.9 5.2 16.5 86 87 A D T < 5 + 0 0 91 -3,-0.7 -3,-0.2 -4,-0.2 -4,-0.1 0.960 50.1 157.7 42.6 69.0 20.1 5.1 12.7 87 88 A K < 0 0 105 -5,-2.8 -4,-0.1 1,-0.2 -1,-0.1 0.179 360.0 360.0-104.2 12.0 17.8 2.1 12.4 88 89 A W 0 0 79 -6,-0.4 -1,-0.2 -5,-0.1 -5,-0.1 0.539 360.0 360.0 -86.7 360.0 16.6 2.7 8.8