==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-OCT-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 24-SEP-13 4C7Q . COMPND 2 MOLECULE: RNA-BINDING GLYCINE-RICH PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: NICOTIANA TABACUM; . AUTHOR F.KAHN,R.BOELENS,S.M.SAQLAN,H.VAN INGEN . 86 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4807.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 63 73.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 25 29.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 11.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 20.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A G 0 0 75 0, 0.0 56,-0.1 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 39.7 19.1 1.6 3.1 2 1 A M + 0 0 146 57,-0.0 2,-0.3 0, 0.0 55,-0.1 0.032 360.0 16.0-176.3 -49.4 20.3 3.6 0.0 3 2 A A S S- 0 0 38 53,-0.1 2,-0.9 2,-0.1 55,-0.3 -0.861 71.9-155.8-145.8 99.7 18.0 6.5 -0.4 4 3 A E + 0 0 112 -2,-0.3 2,-0.3 53,-0.1 53,-0.2 -0.744 48.1 103.1 -88.4 106.2 15.9 7.3 2.6 5 4 A V S S- 0 0 76 51,-1.0 2,-0.3 -2,-0.9 -2,-0.1 -0.927 79.0 -50.7-165.4 174.6 12.8 9.1 1.5 6 5 A E - 0 0 46 -2,-0.3 2,-0.7 48,-0.1 50,-0.2 -0.469 44.6-167.4 -62.2 120.0 9.1 8.4 0.9 7 6 A Y E -A 55 0A 36 48,-2.4 48,-3.3 -2,-0.3 2,-0.5 -0.907 11.4-160.2-111.2 98.1 8.6 5.5 -1.2 8 7 A R E -A 54 0A 47 -2,-0.7 75,-0.8 46,-0.2 76,-0.5 -0.692 7.6-170.4 -85.8 123.3 5.1 5.6 -2.1 9 8 A C E -AB 53 82A 0 44,-3.3 44,-2.2 -2,-0.5 2,-0.6 -0.897 16.1-136.7-113.4 144.4 3.5 2.4 -3.3 10 9 A F E -AB 52 81A 72 71,-1.8 71,-2.5 -2,-0.4 2,-0.6 -0.906 18.6-174.7-104.8 120.0 0.1 2.2 -4.9 11 10 A V E +AB 51 80A 0 40,-2.4 40,-2.9 -2,-0.6 2,-0.3 -0.957 11.1 171.7-116.5 114.0 -2.1 -0.7 -3.8 12 11 A G E +AB 50 79A 10 67,-2.7 67,-2.5 -2,-0.6 38,-0.2 -0.866 50.4 49.6-120.4 152.8 -5.3 -1.0 -5.6 13 12 A G S S+ 0 0 18 36,-2.0 37,-0.2 -2,-0.3 -1,-0.2 0.898 70.4 154.7 87.0 43.1 -7.9 -3.6 -5.5 14 13 A L - 0 0 1 35,-2.7 2,-0.2 -3,-0.2 -1,-0.1 -0.377 48.2 -94.3 -90.7 175.0 -8.3 -3.9 -1.8 15 14 A A > - 0 0 10 58,-0.5 3,-1.8 61,-0.2 34,-0.2 -0.595 28.3-117.9 -90.4 156.6 -11.3 -5.1 -0.1 16 15 A W T 3 S+ 0 0 138 1,-0.3 31,-0.1 -2,-0.2 -1,-0.1 0.561 118.3 52.5 -71.2 -6.0 -13.9 -2.7 1.1 17 16 A A T 3 S+ 0 0 78 57,-0.3 2,-0.3 29,-0.1 -1,-0.3 0.362 81.5 122.9-104.1 -0.3 -13.2 -3.9 4.6 18 17 A T < - 0 0 4 -3,-1.8 2,-0.3 55,-0.1 31,-0.1 -0.481 44.4-166.0 -68.5 122.5 -9.5 -3.2 4.2 19 18 A T > - 0 0 62 -2,-0.3 4,-2.7 1,-0.1 5,-0.1 -0.676 32.7-120.0-103.8 160.7 -8.3 -0.9 6.9 20 19 A D H > S+ 0 0 39 -2,-0.3 4,-2.8 2,-0.2 5,-0.2 0.764 116.3 62.4 -71.0 -20.6 -5.0 0.9 6.9 21 20 A Q H > S+ 0 0 152 2,-0.2 4,-1.4 1,-0.2 -1,-0.2 0.938 111.3 35.3 -63.2 -49.5 -4.4 -1.0 10.1 22 21 A T H > S+ 0 0 46 2,-0.2 4,-1.2 1,-0.2 -2,-0.2 0.874 118.8 53.1 -74.3 -35.9 -4.6 -4.3 8.3 23 22 A L H X S+ 0 0 0 -4,-2.7 4,-1.4 2,-0.2 -2,-0.2 0.954 109.1 47.8 -60.9 -54.2 -2.9 -2.8 5.2 24 23 A G H >X S+ 0 0 3 -4,-2.8 4,-2.0 1,-0.2 3,-1.1 0.951 111.5 46.1 -56.5 -57.8 0.1 -1.4 7.1 25 24 A E H 3X S+ 0 0 137 -4,-1.4 4,-0.9 1,-0.3 -1,-0.2 0.758 106.7 60.4 -61.2 -28.3 1.1 -4.4 9.1 26 25 A A H 3< S+ 0 0 26 -4,-1.2 -1,-0.3 1,-0.2 3,-0.2 0.895 113.4 36.8 -64.8 -37.8 0.8 -6.6 6.1 27 26 A F H XX S+ 0 0 0 -4,-1.4 4,-3.0 -3,-1.1 3,-1.6 0.710 103.5 71.3 -88.0 -21.7 3.5 -4.6 4.4 28 27 A S H 3< S+ 0 0 46 -4,-2.0 -1,-0.2 1,-0.3 -2,-0.2 0.761 91.0 62.8 -62.3 -24.1 5.4 -4.1 7.7 29 28 A Q T 3< S+ 0 0 165 -4,-0.9 -1,-0.3 -3,-0.2 -2,-0.2 0.673 113.6 33.3 -74.3 -18.3 6.3 -7.8 7.3 30 29 A F T <4 S- 0 0 72 -3,-1.6 2,-0.3 1,-0.3 -2,-0.2 0.800 125.1 -7.2-104.8 -44.1 8.1 -6.9 4.0 31 30 A G S < S- 0 0 11 -4,-3.0 2,-0.4 32,-0.1 -1,-0.3 -0.931 78.6 -66.1-153.9 173.2 9.5 -3.5 4.6 32 31 A E - 0 0 95 -2,-0.3 24,-2.1 -3,-0.1 25,-0.5 -0.487 49.5-156.9 -64.6 117.0 10.0 -0.4 6.5 33 32 A I E +C 55 0A 37 -2,-0.4 22,-0.3 22,-0.2 3,-0.1 -0.715 27.5 168.7-101.8 143.8 6.8 1.6 6.7 34 33 A L E S- 0 0 94 20,-3.1 2,-0.3 1,-0.5 21,-0.2 0.589 75.7 -2.4-114.4 -35.4 6.4 5.3 7.3 35 34 A D E -C 54 0A 52 19,-1.2 19,-3.7 -11,-0.1 -1,-0.5 -0.977 53.6-177.7-159.1 146.9 2.8 5.7 6.4 36 35 A S E +C 53 0A 23 -2,-0.3 2,-0.4 17,-0.3 17,-0.2 -0.801 16.6 169.7-155.4 110.7 -0.1 3.5 5.2 37 36 A K E -C 52 0A 99 15,-2.2 15,-2.7 -2,-0.3 2,-0.4 -0.984 27.5-137.6-134.4 139.8 -3.5 5.0 4.6 38 37 A I E -C 51 0A 8 -2,-0.4 2,-0.8 13,-0.2 13,-0.2 -0.757 21.5-133.2 -89.6 133.8 -6.7 3.8 3.0 39 38 A I E -C 50 0A 62 11,-1.7 9,-2.6 -2,-0.4 11,-0.6 -0.815 31.5-157.0 -87.9 114.8 -8.4 6.2 0.8 40 39 A N E -C 47 0A 87 -2,-0.8 2,-0.8 7,-0.3 7,-0.3 -0.530 19.2-113.0 -97.6 164.1 -12.0 6.0 1.8 41 40 A D E >> -C 46 0A 10 5,-3.1 4,-1.5 -2,-0.2 5,-0.7 -0.855 26.4-176.7 -98.6 108.6 -15.2 6.9 0.0 42 41 A R T 45S+ 0 0 199 -2,-0.8 -1,-0.2 1,-0.2 5,-0.0 0.897 78.8 62.1 -71.4 -42.7 -16.7 9.9 1.7 43 42 A E T 45S+ 0 0 109 1,-0.2 -1,-0.2 -3,-0.1 -2,-0.0 0.825 123.4 14.2 -54.9 -46.0 -19.7 9.8 -0.5 44 43 A T T 45S- 0 0 90 2,-0.1 -1,-0.2 3,-0.0 -2,-0.2 0.539 102.3-113.9-110.4 -11.1 -21.0 6.4 0.5 45 44 A G T <5S+ 0 0 68 -4,-1.5 -3,-0.2 1,-0.2 2,-0.1 0.739 80.7 111.7 82.7 23.1 -19.0 5.8 3.7 46 45 A R E S- 0 0 18 -25,-0.5 4,-1.1 -53,-0.2 -1,-0.1 -0.946 71.1-135.1-133.4 148.1 13.4 2.3 1.5 58 57 A E H > S+ 0 0 51 -2,-0.3 4,-3.0 -55,-0.3 -1,-0.1 0.906 108.2 43.4 -66.9 -42.3 13.2 1.6 -2.2 59 58 A K H > S+ 0 0 92 2,-0.2 4,-2.6 1,-0.2 5,-0.3 0.891 109.5 56.4 -74.4 -39.6 14.1 -2.1 -1.9 60 59 A A H > S+ 0 0 17 1,-0.2 4,-0.8 2,-0.2 -1,-0.2 0.809 113.6 42.7 -59.0 -31.5 11.8 -2.6 1.0 61 60 A M H X S+ 0 0 1 -4,-1.1 4,-1.4 2,-0.2 -2,-0.2 0.933 110.9 54.9 -77.9 -50.1 9.1 -1.2 -1.2 62 61 A R H >X S+ 0 0 62 -4,-3.0 4,-1.8 1,-0.2 3,-1.0 0.924 110.0 44.7 -48.4 -58.3 10.2 -3.3 -4.3 63 62 A D H 3X S+ 0 0 97 -4,-2.6 4,-2.9 1,-0.3 5,-0.2 0.895 111.5 55.1 -56.6 -38.5 10.1 -6.7 -2.6 64 63 A A H 3X S+ 0 0 0 -4,-0.8 4,-1.0 -5,-0.3 -1,-0.3 0.765 106.4 52.3 -68.4 -26.4 6.7 -5.7 -1.0 65 64 A I H < S+ 0 0 12 -4,-1.0 3,-1.4 -3,-0.4 2,-0.4 0.724 88.9 103.0-100.7 -25.5 2.1 -8.7 -2.4 69 68 A N T 3< S+ 0 0 83 -4,-2.3 10,-0.2 1,-0.3 3,-0.1 -0.439 92.9 13.0 -66.4 115.9 0.8 -8.3 -5.9 70 69 A G T 3 S+ 0 0 41 8,-3.1 -1,-0.3 -2,-0.4 9,-0.1 0.012 104.1 101.3 111.0 -26.4 -1.6 -11.1 -6.6 71 70 A Q S < S- 0 0 83 -3,-1.4 7,-3.0 6,-0.1 -1,-0.4 -0.199 76.2 -88.3 -88.1-178.6 -2.2 -12.4 -3.1 72 71 A D B +D 77 0B 86 5,-0.3 2,-0.3 -3,-0.1 5,-0.3 -0.657 34.9 176.4 -95.1 142.3 -5.1 -11.8 -0.7 73 72 A L S S- 0 0 11 3,-2.4 -58,-0.5 -2,-0.3 3,-0.4 -0.875 77.8 -18.3-145.1 109.0 -5.4 -9.1 1.7 74 73 A D S S- 0 0 66 -2,-0.3 -57,-0.3 1,-0.2 3,-0.1 0.693 131.8 -44.0 67.3 27.9 -8.7 -8.8 3.7 75 74 A G S S+ 0 0 61 1,-0.2 2,-0.4 -60,-0.1 -1,-0.2 0.637 121.1 88.6 97.6 11.1 -10.6 -11.1 1.3 76 75 A R S S- 0 0 102 -3,-0.4 -3,-2.4 -61,-0.1 2,-0.5 -0.992 78.6-116.1-139.6 139.1 -9.5 -9.7 -2.0 77 76 A N B -D 72 0B 102 -2,-0.4 -5,-0.3 -5,-0.3 2,-0.2 -0.617 44.9-140.4 -65.4 119.1 -6.6 -10.4 -4.3 78 77 A I - 0 0 0 -7,-3.0 -8,-3.1 -2,-0.5 2,-0.6 -0.588 9.0-142.5 -92.7 147.1 -4.7 -7.2 -4.2 79 78 A T E -B 12 0A 73 -67,-2.5 -67,-2.7 -2,-0.2 2,-0.4 -0.938 22.5-175.3-109.3 115.2 -3.0 -5.5 -7.0 80 79 A V E +B 11 0A 3 -2,-0.6 2,-0.3 -15,-0.2 -69,-0.2 -0.925 10.9 158.5-116.3 133.8 0.2 -3.8 -5.9 81 80 A N E -B 10 0A 75 -71,-2.5 -71,-1.8 -2,-0.4 2,-0.2 -0.920 43.1 -76.1-149.1 173.0 2.4 -1.7 -8.2 82 81 A E E +B 9 0A 72 -2,-0.3 -73,-0.2 -73,-0.2 -20,-0.0 -0.496 37.8 163.9 -76.0 135.4 5.0 1.0 -8.3 83 82 A A - 0 0 20 -75,-0.8 -74,-0.2 -2,-0.2 -1,-0.2 0.537 36.3-145.8-122.4 -18.7 3.9 4.5 -7.6 84 83 A Q - 0 0 109 -76,-0.5 2,-0.1 -26,-0.1 -76,-0.1 0.247 45.6 -38.0 62.1 162.9 7.4 6.0 -7.0 85 84 A S 0 0 38 1,-0.2 -78,-0.1 -78,-0.1 -31,-0.0 -0.329 360.0 360.0 -54.3 125.4 8.2 8.8 -4.5 86 85 A R 0 0 184 -2,-0.1 -1,-0.2 -80,-0.0 -79,-0.1 0.560 360.0 360.0-131.4 360.0 5.3 11.4 -4.4