==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 02-AUG-99 1C9F . COMPND 2 MOLECULE: CASPASE-ACTIVATED DNASE; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR T.YAMAZAKI,K.UEGAKI . 87 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6284.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 48 55.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 6 6.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 13.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 9.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 9.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 10 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 236 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 179.4 90.9 -14.9 -6.9 2 2 A C - 0 0 121 1,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.111 360.0-135.9 66.0-172.5 90.0 -12.3 -4.2 3 3 A A - 0 0 94 2,-0.0 -1,-0.1 0, 0.0 0, 0.0 -0.044 18.0-172.1 179.9 63.6 87.5 -9.5 -5.0 4 4 A V - 0 0 86 1,-0.1 2,-0.9 2,-0.0 0, 0.0 -0.302 27.5-123.6 -64.1 150.2 88.4 -6.0 -3.8 5 5 A L - 0 0 78 1,-0.1 2,-1.0 23,-0.0 -1,-0.1 -0.778 26.6-178.4-100.2 98.3 85.7 -3.4 -4.3 6 6 A R S S+ 0 0 213 -2,-0.9 -1,-0.1 1,-0.1 -2,-0.0 -0.205 70.8 46.1 -87.5 48.3 87.1 -0.5 -6.4 7 7 A Q S S- 0 0 128 -2,-1.0 2,-0.2 2,-0.0 -1,-0.1 -0.504 77.8-131.8 172.7 113.6 83.8 1.4 -6.1 8 8 A P - 0 0 88 0, 0.0 2,-0.3 0, 0.0 19,-0.3 -0.482 25.7-131.2 -73.5 139.7 81.5 2.1 -3.2 9 9 A K E -A 26 0A 38 17,-1.9 17,-2.8 -2,-0.2 2,-0.4 -0.712 19.0-155.4 -93.3 142.7 77.8 1.5 -3.8 10 10 A C E -A 25 0A 24 -2,-0.3 60,-1.5 15,-0.3 59,-0.4 -0.892 9.6-173.6-118.0 148.6 75.2 4.1 -2.9 11 11 A V E -Ab 24 70A 3 13,-2.3 13,-1.9 58,-0.4 2,-0.9 -0.978 22.9-133.9-142.4 128.0 71.5 3.7 -2.0 12 12 A K E -Ab 23 71A 73 58,-1.4 60,-2.2 -2,-0.4 2,-1.5 -0.676 18.2-159.5 -82.7 107.5 68.8 6.4 -1.4 13 13 A L E + b 0 72A 9 9,-1.3 9,-0.3 -2,-0.9 60,-0.2 -0.621 19.8 175.9 -88.5 86.2 66.9 5.3 1.7 14 14 A R E - b 0 73A 56 58,-2.4 60,-2.0 -2,-1.5 2,-0.4 -0.524 14.2-153.7 -86.9 157.5 63.7 7.3 1.4 15 15 A A E > - b 0 74A 5 5,-1.7 3,-1.2 58,-0.3 5,-0.5 -0.981 17.7-158.0-136.4 128.9 60.8 6.9 3.9 16 16 A L T 3 S+ 0 0 59 58,-1.2 -1,-0.1 -2,-0.4 59,-0.1 0.812 99.0 58.1 -72.5 -26.9 57.1 7.5 3.3 17 17 A H T 3 S+ 0 0 153 57,-0.3 -1,-0.3 2,-0.0 2,-0.2 0.297 112.4 46.0 -85.1 13.5 56.6 8.0 7.1 18 18 A S S < S- 0 0 54 -3,-1.2 3,-0.0 2,-0.1 -4,-0.0 -0.556 89.0-108.2-133.7-160.4 59.1 10.8 6.9 19 19 A A S S+ 0 0 92 -2,-0.2 2,-0.3 2,-0.1 -3,-0.1 -0.070 88.9 2.2-129.5 35.9 59.8 13.9 4.8 20 20 A C - 0 0 72 -5,-0.5 -5,-1.7 -7,-0.0 2,-0.2 -0.976 69.8-107.8 174.7-163.0 63.0 12.9 3.0 21 21 A K - 0 0 126 -2,-0.3 -7,-0.3 -7,-0.3 2,-0.3 -0.705 19.8-118.3-139.3-168.1 65.5 10.1 2.4 22 22 A F - 0 0 66 -9,-0.3 2,-1.6 -2,-0.2 -9,-1.3 -0.708 13.6-153.4-144.0 90.8 69.1 9.2 3.3 23 23 A G E +A 12 0A 38 -2,-0.3 2,-0.4 -11,-0.2 -11,-0.2 -0.419 27.4 179.7 -64.6 91.7 71.6 8.7 0.5 24 24 A V E -A 11 0A 12 -13,-1.9 -13,-2.3 -2,-1.6 2,-0.3 -0.811 8.8-164.9 -99.4 134.5 74.0 6.3 2.3 25 25 A A E +A 10 0A 64 -2,-0.4 2,-0.3 -15,-0.2 -15,-0.3 -0.885 16.3 155.3-117.5 149.5 77.0 4.9 0.5 26 26 A A E -A 9 0A 15 -17,-2.8 -17,-1.9 -2,-0.3 6,-0.1 -0.942 45.4-124.3-168.5 145.1 79.3 2.0 1.5 27 27 A R S S+ 0 0 168 -2,-0.3 2,-1.2 -19,-0.3 -1,-0.2 0.987 105.4 53.8 -59.0 -58.6 81.6 -0.5 -0.2 28 28 A S S >> S- 0 0 67 1,-0.2 3,-4.4 -20,-0.1 4,-0.8 -0.624 78.4-152.9 -80.3 98.1 79.8 -3.6 1.1 29 29 A C H 3> S+ 0 0 31 -2,-1.2 4,-1.9 1,-0.3 -1,-0.2 0.813 94.3 71.0 -40.6 -29.2 76.2 -3.0 0.0 30 30 A Q H 3> S+ 0 0 145 1,-0.2 4,-1.9 2,-0.2 -1,-0.3 0.846 93.5 55.2 -60.1 -29.0 75.4 -5.2 3.0 31 31 A E H <> S+ 0 0 109 -3,-4.4 4,-1.8 2,-0.2 5,-0.4 0.941 103.7 52.2 -70.4 -45.0 76.5 -2.2 5.2 32 32 A L H X S+ 0 0 2 -4,-0.8 4,-1.2 2,-0.2 -2,-0.2 0.930 111.7 48.1 -57.8 -43.4 74.1 0.2 3.5 33 33 A L H >X S+ 0 0 16 -4,-1.9 4,-2.7 2,-0.2 3,-0.6 0.999 113.9 43.3 -61.9 -65.9 71.1 -2.2 4.1 34 34 A R H 3X S+ 0 0 187 -4,-1.9 4,-1.5 1,-0.3 3,-0.2 0.950 117.8 44.2 -43.6 -69.9 71.8 -2.9 7.8 35 35 A K H 3X S+ 0 0 107 -4,-1.8 4,-2.0 1,-0.2 5,-0.3 0.826 112.4 59.0 -47.2 -27.4 72.6 0.8 8.7 36 36 A G H S+ 0 0 34 -4,-2.7 5,-1.4 -3,-0.2 -1,-0.2 0.681 115.8 54.9 -62.6 -11.6 67.1 -0.7 8.7 38 38 A V H ><5S+ 0 0 75 -4,-1.5 3,-0.6 -5,-0.4 -2,-0.2 0.944 108.9 37.4 -85.3 -71.8 68.7 1.1 11.7 39 39 A R H 3<5S+ 0 0 184 -4,-2.0 -2,-0.2 1,-0.3 -3,-0.1 0.793 131.5 36.9 -52.3 -23.5 68.4 4.8 11.1 40 40 A F T 3<5S- 0 0 35 -4,-1.7 -1,-0.3 -5,-0.3 -2,-0.2 0.626 101.7-142.2-103.0 -16.6 65.0 4.0 9.6 41 41 A Q T < 5 + 0 0 136 -3,-0.6 -3,-0.2 -5,-0.3 -4,-0.1 0.962 28.4 175.0 54.0 85.8 64.2 1.2 12.1 42 42 A L < - 0 0 6 -5,-1.4 -1,-0.2 5,-0.1 18,-0.1 -0.846 13.2-161.2-129.1 99.9 62.3 -1.4 10.0 43 43 A P - 0 0 72 0, 0.0 17,-0.1 0, 0.0 0, 0.0 -0.359 24.7-123.8 -73.5 154.1 61.4 -4.7 11.7 44 44 A M S > S+ 0 0 130 -2,-0.1 3,-0.6 2,-0.1 2,-0.1 0.968 95.5 58.3 -63.9 -51.3 60.6 -7.8 9.5 45 45 A P T 3 S+ 0 0 99 0, 0.0 3,-0.1 0, 0.0 32,-0.0 -0.369 115.4 13.2 -76.6 157.0 57.2 -8.3 11.0 46 46 A G T 3 S+ 0 0 64 1,-0.2 2,-0.3 -2,-0.1 32,-0.2 0.903 122.7 72.5 44.1 44.7 54.6 -5.6 10.9 47 47 A S < + 0 0 8 -3,-0.6 29,-0.3 29,-0.2 2,-0.2 -0.974 52.7 177.4-168.0 178.0 56.7 -3.8 8.4 48 48 A R E -C 75 0A 159 27,-2.5 27,-1.0 -2,-0.3 2,-0.2 -0.837 16.1-139.9 172.7 148.8 58.0 -3.9 4.7 49 49 A L E -CD 74 58A 12 9,-1.3 9,-2.0 -2,-0.2 2,-0.3 -0.740 13.9-162.9-118.2 168.8 60.1 -2.0 2.2 50 50 A C E -C 73 0A 3 23,-1.5 23,-1.2 7,-0.3 7,-0.3 -0.977 27.0-108.4-155.0 139.7 59.6 -1.3 -1.5 51 51 A L E >>> -C 72 0A 28 -2,-0.3 5,-1.3 21,-0.2 4,-1.1 -0.483 19.7-153.3 -68.1 127.0 61.8 -0.1 -4.4 52 52 A Y T 345S+ 0 0 70 19,-1.4 -1,-0.2 -2,-0.3 20,-0.1 0.480 77.3 93.7 -80.8 1.3 60.9 3.5 -5.4 53 53 A E T 345S- 0 0 109 18,-0.5 -1,-0.2 1,-0.2 19,-0.1 0.948 120.4 -23.4 -59.4 -46.4 62.1 2.8 -9.0 54 54 A D T <45S- 0 0 81 -3,-0.6 -2,-0.2 29,-0.1 -1,-0.2 0.209 107.7 -73.4-151.0 15.5 58.6 1.9 -10.1 55 55 A G T <5S+ 0 0 12 -4,-1.1 -3,-0.2 28,-0.3 26,-0.1 0.769 76.0 162.5 94.0 29.0 56.7 0.8 -6.9 56 56 A T < - 0 0 55 -5,-1.3 2,-0.5 -6,-0.1 -1,-0.1 -0.323 32.4-129.6 -76.1 164.6 58.4 -2.6 -6.5 57 57 A E + 0 0 152 -7,-0.3 -7,-0.3 -5,-0.0 2,-0.3 -0.959 39.4 142.1-121.5 130.7 58.2 -4.3 -3.1 58 58 A V B -D 49 0A 28 -9,-2.0 -9,-1.3 -2,-0.5 2,-0.3 -0.942 35.5-123.8-153.1 173.9 61.2 -5.7 -1.2 59 59 A T > - 0 0 37 -2,-0.3 3,-1.1 -11,-0.2 4,-0.2 -0.821 30.3-110.0-123.3 164.9 62.7 -6.1 2.4 60 60 A D T 3 S+ 0 0 38 -2,-0.3 3,-0.2 1,-0.3 -23,-0.1 0.671 122.3 47.5 -67.6 -12.2 65.9 -5.1 4.1 61 61 A D T 3 S+ 0 0 83 1,-0.1 -1,-0.3 -28,-0.1 -27,-0.0 0.494 104.8 58.5-105.4 -5.4 66.8 -8.8 4.2 62 62 A C S < S+ 0 0 78 -3,-1.1 -2,-0.2 1,-0.1 -1,-0.1 0.187 76.9 106.4-107.4 17.2 65.9 -9.6 0.5 63 63 A F + 0 0 17 -3,-0.2 3,-0.1 1,-0.2 -30,-0.1 -0.783 38.3 165.8-101.0 96.5 68.3 -7.0 -1.0 64 64 A P S S- 0 0 106 0, 0.0 2,-0.5 0, 0.0 -1,-0.2 0.944 74.2 -11.0 -72.1 -91.0 71.2 -9.0 -2.5 65 65 A G S S- 0 0 53 -36,-0.0 -2,-0.0 -35,-0.0 -35,-0.0 -0.547 79.5-159.5-112.5 68.6 73.3 -6.7 -4.8 66 66 A L - 0 0 11 -2,-0.5 3,-0.1 -3,-0.1 4,-0.1 -0.015 26.2-102.4 -42.8 152.8 71.1 -3.6 -5.1 67 67 A P > - 0 0 80 0, 0.0 3,-1.4 0, 0.0 -1,-0.1 -0.282 55.1 -66.7 -75.4 164.5 71.9 -1.4 -8.1 68 68 A N T 3 S+ 0 0 108 1,-0.3 3,-0.2 -59,-0.1 -57,-0.1 -0.113 126.0 7.6 -49.1 148.9 73.9 1.8 -7.8 69 69 A D T 3 S- 0 0 78 -59,-0.4 -57,-0.4 1,-0.2 -58,-0.4 0.870 95.5-155.0 43.1 37.3 72.0 4.5 -5.8 70 70 A A E < -b 11 0A 1 -60,-1.5 -58,-1.4 -3,-1.4 2,-0.9 -0.125 8.4-131.4 -42.9 127.6 69.5 1.7 -5.1 71 71 A E E +b 12 0A 48 -60,-0.2 -19,-1.4 -3,-0.2 -18,-0.5 -0.749 35.4 171.3 -90.5 108.7 66.1 3.4 -4.4 72 72 A L E -bC 13 51A 8 -60,-2.2 -58,-2.4 -2,-0.9 2,-0.4 -0.906 14.5-162.0-117.9 145.4 64.6 1.9 -1.2 73 73 A L E -bC 14 50A 2 -23,-1.2 -23,-1.5 -2,-0.4 -58,-0.3 -0.979 19.4-124.5-128.6 137.3 61.5 3.2 0.7 74 74 A L E +bC 15 49A 17 -60,-2.0 -58,-1.2 -2,-0.4 2,-0.3 -0.552 42.3 157.1 -77.4 138.9 60.5 2.5 4.3 75 75 A L E - C 0 48A 17 -27,-1.0 -27,-2.5 -2,-0.2 2,-0.3 -0.989 17.1-176.2-156.0 162.3 56.9 1.0 4.6 76 76 A T > - 0 0 34 -29,-0.3 3,-3.2 -2,-0.3 -29,-0.2 -0.956 52.5 -80.0-154.0 171.9 54.8 -1.0 7.0 77 77 A A T 3 S+ 0 0 97 1,-0.3 -30,-0.1 -2,-0.3 -31,-0.0 0.812 132.3 54.3 -49.6 -25.5 51.4 -2.6 7.4 78 78 A G T 3 S+ 0 0 71 -32,-0.2 -1,-0.3 2,-0.0 2,-0.3 0.123 113.9 46.0 -95.4 23.4 50.3 0.9 8.3 79 79 A E < - 0 0 32 -3,-3.2 2,-0.3 2,-0.0 -4,-0.1 -0.990 59.7-174.2-156.4 162.7 51.8 2.4 5.1 80 80 A T - 0 0 119 -2,-0.3 2,-0.5 -5,-0.1 -30,-0.0 -0.990 14.5-144.6-160.2 151.3 51.9 1.7 1.3 81 81 A W - 0 0 62 -2,-0.3 -2,-0.0 1,-0.2 -8,-0.0 -0.971 3.3-160.1-124.2 126.3 53.7 3.0 -1.8 82 82 A H - 0 0 158 -2,-0.5 2,-0.3 1,-0.2 -1,-0.2 0.998 46.5-102.3 -66.8 -71.3 52.0 3.2 -5.2 83 83 A G - 0 0 15 2,-0.1 -28,-0.3 -31,-0.0 -1,-0.2 -0.941 17.4 -94.6 163.6 175.8 55.0 3.4 -7.6 84 84 A Y S S+ 0 0 152 -2,-0.3 2,-0.2 2,-0.0 -29,-0.1 -0.351 80.0 106.9-114.2 53.2 57.0 5.8 -9.7 85 85 A V S S- 0 0 79 -31,-0.1 2,-0.3 -2,-0.1 -2,-0.1 -0.659 73.0-115.8-120.6 179.1 55.4 5.3 -13.2 86 86 A S 0 0 125 -2,-0.2 -2,-0.0 1,-0.2 0, 0.0 -0.431 360.0 360.0-114.2 59.7 53.0 7.3 -15.4 87 87 A D 0 0 169 -2,-0.3 -1,-0.2 0, 0.0 0, 0.0 0.175 360.0 360.0-144.8 360.0 49.9 5.2 -15.4