==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 13-DEC-05 2C9N . COMPND 2 MOLECULE: BZLF1 TRANS-ACTIVATOR PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN HERPESVIRUS 4; . AUTHOR C.PETOSA,P.MORAND,F.BAUDIN,M.MOULIN,J.B.ARTERO,C.W.MULLER . 118 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 9050.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 96 81.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 5.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 85 72.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 178 Y K > 0 0 220 0, 0.0 4,-2.1 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 -42.7 -13.1 27.2 20.0 2 179 Y R H > + 0 0 204 2,-0.2 4,-1.6 1,-0.2 5,-0.1 0.880 360.0 49.8 -64.9 -39.1 -12.5 23.5 19.5 3 180 Y Y H > S+ 0 0 144 1,-0.2 4,-1.6 2,-0.2 -1,-0.2 0.919 110.6 49.0 -65.7 -45.9 -15.7 22.6 21.3 4 181 Y K H > S+ 0 0 161 1,-0.2 4,-2.1 2,-0.2 -2,-0.2 0.853 110.4 50.6 -63.9 -35.4 -17.7 25.1 19.3 5 182 Y N H X S+ 0 0 105 -4,-2.1 4,-2.3 1,-0.2 -1,-0.2 0.852 105.8 56.5 -71.7 -30.6 -16.3 23.8 16.0 6 183 Y R H X S+ 0 0 115 -4,-1.6 4,-1.6 2,-0.2 -1,-0.2 0.876 108.5 47.7 -65.9 -35.6 -17.2 20.3 17.1 7 184 Y V H X S+ 0 0 61 -4,-1.6 4,-2.0 1,-0.2 -2,-0.2 0.914 111.6 50.2 -70.1 -42.0 -20.8 21.4 17.5 8 185 Y A H X S+ 0 0 49 -4,-2.1 4,-2.4 2,-0.2 -2,-0.2 0.828 107.7 52.4 -67.0 -34.2 -20.7 23.1 14.1 9 186 Y S H X S+ 0 0 41 -4,-2.3 4,-2.9 2,-0.2 5,-0.2 0.926 109.0 50.4 -66.4 -44.7 -19.4 20.0 12.3 10 187 Y R H X S+ 0 0 133 -4,-1.6 4,-2.1 1,-0.2 5,-0.2 0.923 113.6 46.1 -57.2 -44.5 -22.1 17.9 13.8 11 188 Y K H X S+ 0 0 161 -4,-2.0 4,-2.2 2,-0.2 5,-0.3 0.886 112.4 49.6 -65.9 -40.0 -24.7 20.5 12.6 12 189 Y C H X S+ 0 0 49 -4,-2.4 4,-1.1 2,-0.2 -2,-0.2 0.928 111.9 48.2 -65.9 -45.5 -23.1 20.7 9.1 13 190 Y R H X S+ 0 0 136 -4,-2.9 4,-2.4 2,-0.2 -2,-0.2 0.886 114.0 45.3 -63.1 -40.4 -23.1 17.0 8.7 14 191 Y A H X>S+ 0 0 49 -4,-2.1 4,-5.5 2,-0.3 5,-0.6 0.871 113.2 55.6 -70.7 -34.5 -26.7 16.6 9.9 15 192 Y K H X5S+ 0 0 109 -4,-2.2 4,-1.0 1,-0.4 -2,-0.2 0.870 114.6 41.0 -62.7 -20.6 -27.6 19.5 7.6 16 193 Y F H X5S+ 0 0 44 -4,-1.1 4,-2.0 -5,-0.3 -1,-0.4 0.869 112.6 47.0 -97.1 -37.9 -26.4 17.9 5.7 17 194 Y K H X5S+ 0 0 130 -4,-2.4 4,-1.6 1,-0.2 -2,-0.2 0.895 118.1 45.8 -63.5 -40.2 -27.6 14.4 6.5 18 195 Y Q H X5S+ 0 0 104 -4,-5.5 4,-2.6 2,-0.2 -1,-0.2 0.852 108.9 56.2 -71.2 -33.1 -31.2 15.6 6.8 19 196 Y L H X< + 0 0 14 -4,-2.4 3,-2.7 -5,-0.2 -1,-0.3 -0.595 67.2 170.1-123.1 69.2 -57.2 12.6 -23.4 46 223 Y P T 3 S+ 0 0 94 0, 0.0 -1,-0.1 0, 0.0 -3,-0.1 0.717 78.7 57.6 -50.0 -24.6 -57.0 8.9 -24.5 47 224 Y S T 3 S+ 0 0 124 -3,-0.1 2,-0.5 2,-0.1 -5,-0.1 0.324 86.8 97.7 -93.2 8.1 -55.9 10.1 -28.0 48 225 Y L < - 0 0 30 -3,-2.7 2,-1.4 -6,-0.2 3,-0.2 -0.849 65.7-143.7-104.8 130.4 -52.9 12.0 -26.8 49 226 Y D >> + 0 0 84 -2,-0.5 4,-1.3 1,-0.2 3,-1.0 -0.657 25.3 174.7 -89.4 83.7 -49.3 10.6 -26.9 50 227 Y V H >> S+ 0 0 2 -2,-1.4 4,-2.1 1,-0.2 3,-0.6 0.914 73.1 58.1 -56.1 -49.7 -48.0 12.2 -23.7 51 228 Y D H 34 S+ 0 0 76 1,-0.3 5,-0.3 2,-0.2 -1,-0.2 0.743 107.8 49.6 -55.5 -24.5 -44.6 10.4 -23.7 52 229 Y S H <4 S+ 0 0 84 -3,-1.0 -1,-0.3 3,-0.1 -2,-0.2 0.813 115.2 41.9 -84.4 -33.1 -44.0 12.0 -27.1 53 230 Y I H << S+ 0 0 85 -4,-1.3 -2,-0.2 -3,-0.6 -3,-0.1 0.980 129.6 22.6 -75.8 -65.3 -44.9 15.5 -26.1 54 231 Y I S < S- 0 0 9 -4,-2.1 -1,-0.3 -5,-0.1 -2,-0.1 -0.781 91.4-145.1-106.1 87.2 -43.3 15.7 -22.6 55 232 Y P - 0 0 77 0, 0.0 -3,-0.1 0, 0.0 2,-0.1 -0.112 20.3-107.7 -51.6 146.0 -40.5 13.1 -22.8 56 233 Y R - 0 0 128 -5,-0.3 34,-0.0 1,-0.0 -5,-0.0 -0.390 27.3-138.8 -75.0 154.3 -39.8 11.2 -19.6 57 234 Y T - 0 0 49 1,-0.1 -1,-0.0 -2,-0.1 29,-0.0 -0.864 20.8-111.4-113.2 147.7 -36.6 11.8 -17.6 58 235 Y P 0 0 103 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.051 360.0 360.0 -67.1-179.3 -34.5 9.1 -16.0 59 236 Y D 0 0 112 31,-0.0 24,-0.1 28,-0.0 -31,-0.0 -0.870 360.0 360.0-139.6 360.0 -34.2 8.8 -12.2 60 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 61 178 Z K > 0 0 219 0, 0.0 4,-1.9 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 16.1 -3.2 2.7 6.0 62 179 Z R H > + 0 0 214 1,-0.2 4,-1.8 2,-0.2 5,-0.1 0.880 360.0 51.9 -67.5 -36.5 -3.4 6.5 6.2 63 180 Z Y H > S+ 0 0 147 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.929 109.0 49.2 -64.8 -46.8 -3.2 6.9 2.4 64 181 Z K H > S+ 0 0 148 1,-0.2 4,-2.5 2,-0.2 -2,-0.2 0.915 113.2 45.9 -60.4 -45.4 -6.0 4.4 1.7 65 182 Z N H X S+ 0 0 103 -4,-1.9 4,-2.7 2,-0.2 -1,-0.2 0.845 106.8 58.3 -69.5 -32.0 -8.4 6.0 4.2 66 183 Z R H X S+ 0 0 116 -4,-1.8 4,-1.9 2,-0.2 -1,-0.2 0.940 110.9 44.4 -60.6 -43.6 -7.6 9.5 2.8 67 184 Z V H X S+ 0 0 60 -4,-1.9 4,-2.4 1,-0.2 -2,-0.2 0.935 112.6 49.8 -64.6 -49.2 -8.8 8.2 -0.6 68 185 Z A H X S+ 0 0 49 -4,-2.5 4,-3.2 1,-0.2 -1,-0.2 0.858 108.1 55.0 -60.4 -36.0 -11.8 6.4 0.8 69 186 Z S H X S+ 0 0 35 -4,-2.7 4,-2.5 2,-0.2 5,-0.2 0.960 109.2 46.0 -60.8 -52.7 -12.8 9.6 2.7 70 187 Z R H X S+ 0 0 167 -4,-1.9 4,-1.8 1,-0.2 -2,-0.2 0.897 114.6 49.6 -56.0 -41.6 -12.7 11.7 -0.5 71 188 Z K H X S+ 0 0 158 -4,-2.4 4,-2.7 2,-0.2 -2,-0.2 0.943 109.6 49.4 -64.3 -48.6 -14.7 8.9 -2.2 72 189 Z C H X S+ 0 0 79 -4,-3.2 4,-3.4 1,-0.2 -2,-0.2 0.900 113.3 47.6 -58.8 -41.0 -17.4 8.7 0.5 73 190 Z R H X S+ 0 0 176 -4,-2.5 4,-3.2 -5,-0.2 5,-0.3 0.812 111.1 50.7 -70.7 -30.1 -17.8 12.5 0.5 74 191 Z A H X S+ 0 0 36 -4,-1.8 4,-3.8 -5,-0.2 5,-0.2 0.927 112.9 44.7 -72.8 -44.0 -18.0 12.6 -3.3 75 192 Z K H X S+ 0 0 131 -4,-2.7 4,-5.3 2,-0.2 -2,-0.2 0.941 118.0 46.3 -53.2 -51.8 -20.7 9.9 -3.4 76 193 Z F H X S+ 0 0 33 -4,-3.4 4,-2.6 1,-0.2 -2,-0.2 0.940 120.2 37.7 -61.4 -49.1 -22.5 11.7 -0.5 77 194 Z K H X S+ 0 0 105 -4,-3.2 4,-2.3 1,-0.2 -1,-0.2 0.897 120.7 49.0 -59.1 -40.7 -22.2 15.1 -2.1 78 195 Z Q H X S+ 0 0 120 -4,-3.8 4,-3.3 -5,-0.3 -2,-0.2 0.935 109.4 51.0 -65.0 -47.0 -22.8 13.5 -5.5 79 196 Z L H X S+ 0 0 42 -4,-5.3 4,-2.7 1,-0.2 5,-0.3 0.938 112.1 47.9 -54.7 -48.8 -25.9 11.6 -4.2 80 197 Z L H X S+ 0 0 14 -4,-2.6 4,-2.0 1,-0.2 -1,-0.2 0.901 113.1 46.4 -59.6 -45.9 -27.3 14.8 -2.8 81 198 Z Q H X S+ 0 0 118 -4,-2.3 4,-2.3 -5,-0.2 -1,-0.2 0.921 112.0 53.9 -63.8 -42.7 -26.7 16.7 -6.1 82 199 Z H H X S+ 0 0 72 -4,-3.3 4,-2.8 2,-0.2 -2,-0.2 0.945 109.9 43.9 -56.6 -54.2 -28.2 13.8 -8.0 83 200 Z Y H X S+ 0 0 30 -4,-2.7 4,-3.2 1,-0.2 5,-0.2 0.903 112.1 55.1 -60.0 -39.2 -31.5 13.7 -6.1 84 201 Z R H X S+ 0 0 132 -4,-2.0 4,-2.2 -5,-0.3 -1,-0.2 0.912 110.1 45.6 -60.0 -43.5 -31.7 17.4 -6.3 85 202 Z E H X S+ 0 0 108 -4,-2.3 4,-2.9 2,-0.2 -2,-0.2 0.921 113.1 49.1 -67.1 -44.6 -31.3 17.3 -10.0 86 203 Z V H X S+ 0 0 12 -4,-2.8 4,-3.0 1,-0.2 5,-0.2 0.946 112.1 49.4 -59.6 -46.6 -33.9 14.5 -10.3 87 204 Z A H X S+ 0 0 7 -4,-3.2 4,-2.1 1,-0.2 -1,-0.2 0.891 114.0 44.9 -59.5 -42.5 -36.3 16.4 -8.1 88 205 Z A H X S+ 0 0 60 -4,-2.2 4,-2.0 -5,-0.2 -1,-0.2 0.893 112.8 51.3 -69.2 -41.6 -35.9 19.6 -10.2 89 206 Z A H X S+ 0 0 28 -4,-2.9 4,-1.8 1,-0.2 -2,-0.2 0.952 112.8 45.1 -60.7 -50.1 -36.2 17.7 -13.4 90 207 Z K H X S+ 0 0 3 -4,-3.0 4,-2.9 1,-0.2 -2,-0.2 0.898 109.9 55.4 -61.2 -42.7 -39.4 16.0 -12.4 91 208 Z S H X S+ 0 0 21 -4,-2.1 4,-1.8 -5,-0.2 -1,-0.2 0.904 108.6 46.3 -57.6 -46.1 -40.9 19.2 -11.0 92 209 Z S H X S+ 0 0 55 -4,-2.0 4,-1.5 2,-0.2 -1,-0.2 0.882 113.3 50.4 -65.3 -37.6 -40.5 21.1 -14.3 93 210 Z E H X S+ 0 0 0 -4,-1.8 4,-1.9 1,-0.2 -2,-0.2 0.918 109.4 51.2 -65.4 -43.3 -41.9 18.1 -16.1 94 211 Z N H X S+ 0 0 0 -4,-2.9 4,-2.4 1,-0.2 -1,-0.2 0.830 106.7 53.5 -63.9 -33.8 -44.9 18.0 -13.8 95 212 Z D H X S+ 0 0 82 -4,-1.8 4,-1.5 2,-0.2 -1,-0.2 0.868 108.8 49.7 -69.9 -34.5 -45.6 21.7 -14.3 96 213 Z R H X S+ 0 0 112 -4,-1.5 4,-2.2 2,-0.2 -2,-0.2 0.852 111.3 49.5 -70.7 -34.5 -45.7 21.2 -18.0 97 214 Z L H X S+ 0 0 1 -4,-1.9 4,-2.3 2,-0.2 -2,-0.2 0.908 109.5 51.2 -69.8 -42.5 -48.1 18.2 -17.6 98 215 Z R H X S+ 0 0 15 -4,-2.4 4,-1.3 1,-0.2 -2,-0.2 0.829 112.3 46.9 -63.2 -33.9 -50.4 20.3 -15.3 99 216 Z L H X S+ 0 0 110 -4,-1.5 4,-2.6 2,-0.2 -1,-0.2 0.908 110.1 52.2 -74.6 -42.5 -50.5 23.1 -17.9 100 217 Z L H X S+ 0 0 23 -4,-2.2 4,-0.6 1,-0.2 -2,-0.2 0.895 110.6 48.3 -59.9 -41.1 -51.1 20.6 -20.8 101 218 Z L H X S+ 0 0 0 -4,-2.3 4,-2.9 2,-0.2 3,-0.3 0.858 110.5 51.9 -68.7 -34.8 -54.1 19.2 -18.9 102 219 Z K H < S+ 0 0 111 -4,-1.3 -2,-0.2 1,-0.2 -1,-0.2 0.952 113.5 42.8 -65.9 -48.4 -55.4 22.6 -18.1 103 220 Z Q H < S+ 0 0 119 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.520 120.9 43.2 -76.6 -4.9 -55.3 23.6 -21.8 104 221 Z M H < S+ 0 0 87 -4,-0.6 -2,-0.2 -3,-0.3 -1,-0.2 0.706 131.1 21.7-106.4 -33.6 -56.7 20.3 -22.8 105 222 Z C S >< S+ 0 0 22 -4,-2.9 3,-0.7 -5,-0.2 -2,-0.2 -0.595 72.6 173.5-135.5 70.0 -59.4 20.0 -20.1 106 223 Z P T 3 S+ 0 0 85 0, 0.0 2,-0.8 0, 0.0 -1,-0.1 0.795 73.6 58.2 -46.2 -42.9 -60.0 23.6 -19.0 107 224 Z S T 3 S+ 0 0 124 2,-0.1 2,-0.4 0, 0.0 -5,-0.1 -0.264 86.0 101.5 -90.6 49.2 -63.0 22.8 -16.8 108 225 Z L < - 0 0 33 -2,-0.8 2,-1.5 -3,-0.7 3,-0.2 -0.983 63.1-145.5-136.3 124.6 -61.1 20.3 -14.5 109 226 Z D > + 0 0 93 -2,-0.4 3,-0.9 1,-0.2 4,-0.3 -0.660 26.6 169.8 -89.1 85.0 -59.7 21.0 -11.1 110 227 Z V G >> S+ 0 0 9 -2,-1.5 4,-3.8 1,-0.2 3,-1.7 0.839 72.0 63.9 -63.5 -36.3 -56.6 18.8 -11.2 111 228 Z D G 34 S+ 0 0 81 1,-0.3 -1,-0.2 2,-0.2 -2,-0.1 0.764 100.0 53.6 -60.9 -25.7 -55.2 20.3 -8.0 112 229 Z S G <4 S+ 0 0 96 -3,-0.9 -1,-0.3 2,-0.2 -2,-0.2 0.550 116.9 38.2 -85.1 -8.8 -58.2 18.8 -6.2 113 230 Z I T <4 S+ 0 0 74 -3,-1.7 -2,-0.2 -4,-0.3 -3,-0.1 0.751 138.5 10.2-105.5 -42.5 -57.3 15.4 -7.7 114 231 Z I S < S- 0 0 8 -4,-3.8 -2,-0.2 -5,-0.1 -1,-0.2 -0.726 82.0-153.4-141.7 85.8 -53.5 15.6 -7.5 115 232 Z P - 0 0 85 0, 0.0 2,-0.1 0, 0.0 -3,-0.1 -0.165 34.7 -86.0 -59.1 154.2 -52.4 18.5 -5.4 116 233 Z R - 0 0 144 1,-0.1 -86,-0.0 -5,-0.0 -21,-0.0 -0.393 44.1-113.9 -64.2 133.9 -48.9 20.1 -6.1 117 234 Z T - 0 0 28 -2,-0.1 2,-2.4 1,-0.1 -1,-0.1 -0.567 30.1-113.5 -73.1 124.5 -46.1 18.3 -4.3 118 235 Z P 0 0 118 0, 0.0 -1,-0.1 0, 0.0 -88,-0.0 -0.402 360.0 360.0 -62.9 72.9 -44.5 20.8 -1.7 119 236 Z D 0 0 129 -2,-2.4 -93,-0.1 -90,-0.0 -92,-0.1 0.221 360.0 360.0 -0.0 360.0 -41.2 21.0 -3.5