==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-DEC-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN/DNA 23-FEB-99 1CA5 . COMPND 2 MOLECULE: 5'-D(*GP*TP*GP*AP*TP*CP*AP*C)-3'; . SOURCE 2 SYNTHETIC: YES; . AUTHOR S.SU,Y.-G.GAO,H.ROBINSON,J.W.SHRIVER,A.H.-J.WANG . 65 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4897.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 60.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 22 33.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 12.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A V 0 0 92 0, 0.0 15,-2.4 0, 0.0 16,-0.3 0.000 360.0 360.0 360.0 171.8 9.5 6.9 27.2 2 3 A K E -A 15 0A 114 13,-0.2 2,-0.4 14,-0.1 13,-0.2 -0.892 360.0-156.3-125.6 152.4 9.7 10.2 25.4 3 4 A V E -A 14 0A 4 11,-1.9 11,-1.9 -2,-0.3 2,-0.4 -0.983 14.9-153.4-121.6 128.4 11.1 11.7 22.2 4 5 A K E +A 13 0A 118 -2,-0.4 9,-0.3 9,-0.3 2,-0.3 -0.927 28.5 165.9-102.5 137.0 11.7 15.4 22.1 5 6 A F E -A 12 0A 9 7,-2.2 7,-1.0 -2,-0.4 2,-0.4 -0.902 36.3-107.3-149.2 173.5 11.7 17.0 18.7 6 7 A K B +B 43 0B 169 37,-0.8 37,-0.5 -2,-0.3 2,-0.3 -0.880 41.9 136.6-109.5 133.1 11.5 19.9 16.2 7 8 A Y S S- 0 0 118 -2,-0.4 2,-0.7 35,-0.1 3,-0.4 -0.760 87.9 -16.4-169.7 123.1 8.5 20.9 14.1 8 9 A K S S- 0 0 168 -2,-0.3 -2,-0.0 1,-0.2 0, 0.0 -0.565 106.0 -87.9 71.4-106.5 7.7 24.6 13.9 9 10 A G S S+ 0 0 51 -2,-0.7 -1,-0.2 2,-0.1 3,-0.1 0.413 98.3 104.9-177.3 -0.3 9.8 25.6 16.9 10 11 A E S S- 0 0 142 -3,-0.4 -2,-0.1 1,-0.1 -4,-0.1 0.408 85.2-121.4 -75.8 6.4 7.9 25.5 20.2 11 12 A E - 0 0 95 -4,-0.3 2,-0.3 1,-0.1 -5,-0.2 0.401 32.9-148.1 63.5 150.4 9.9 22.3 21.0 12 13 A K E -A 5 0A 86 -7,-1.0 -7,-2.2 -3,-0.1 2,-0.3 -0.996 22.1-172.5-153.9 157.0 8.2 19.0 21.7 13 14 A E E -A 4 0A 99 -2,-0.3 2,-0.3 -9,-0.3 -9,-0.3 -0.972 14.0-173.2-144.4 144.5 8.2 15.7 23.5 14 15 A V E -A 3 0A 10 -11,-1.9 -11,-1.9 -2,-0.3 2,-0.3 -0.998 29.7-114.8-147.2 140.3 5.9 12.8 23.1 15 16 A D E > -A 2 0A 57 -2,-0.3 3,-2.2 -13,-0.2 -13,-0.2 -0.570 28.0-131.6 -68.9 133.5 5.3 9.5 24.9 16 17 A T G > S+ 0 0 16 -15,-2.4 3,-1.3 1,-0.3 -1,-0.2 0.695 105.6 71.5 -62.3 -15.1 6.2 6.8 22.4 17 18 A S G 3 S+ 0 0 95 -16,-0.3 -1,-0.3 1,-0.3 -15,-0.1 0.690 94.9 54.9 -73.5 -15.8 2.8 5.2 23.4 18 19 A K G < S+ 0 0 91 -3,-2.2 16,-0.9 17,-0.0 2,-0.7 0.177 81.4 111.8-103.7 19.6 1.2 8.1 21.4 19 20 A I E < +C 33 0B 20 -3,-1.3 14,-0.3 14,-0.2 3,-0.1 -0.841 38.2 179.3-103.0 108.9 3.1 7.4 18.1 20 21 A K E + 0 0 111 12,-1.1 2,-0.4 -2,-0.7 13,-0.2 0.997 66.7 18.1 -68.8 -74.0 1.0 6.2 15.2 21 22 A K E -C 32 0B 91 11,-0.5 11,-2.7 2,-0.0 2,-0.3 -0.915 59.9-178.0-115.1 141.9 3.4 5.8 12.3 22 23 A V E +C 31 0B 13 -2,-0.4 2,-0.3 9,-0.3 9,-0.2 -0.963 15.2 150.9-128.9 139.9 7.2 5.6 12.2 23 24 A W E -C 30 0B 99 7,-2.2 7,-2.9 -2,-0.3 2,-0.5 -0.970 40.5-100.9-162.6 167.8 9.5 5.4 9.1 24 25 A R E -C 29 0B 104 -2,-0.3 2,-0.7 5,-0.2 5,-0.2 -0.896 23.3-179.1-106.4 122.9 13.0 6.2 7.8 25 26 A V E > S-C 28 0B 63 3,-2.2 3,-1.3 -2,-0.5 2,-0.5 -0.925 71.1 -56.5-115.9 98.8 13.8 9.2 5.5 26 27 A G T 3 S- 0 0 63 -2,-0.7 -2,-0.0 1,-0.2 0, 0.0 -0.524 118.9 -22.0 69.5-118.7 17.5 9.1 4.8 27 28 A K T 3 S+ 0 0 189 -2,-0.5 19,-2.1 -3,-0.1 20,-0.4 -0.133 123.4 93.1-117.7 36.1 19.3 9.1 8.2 28 29 A M E < -CD 25 45B 75 -3,-1.3 -3,-2.2 17,-0.2 2,-0.5 -0.909 69.0-136.6-129.4 147.3 16.3 10.6 9.9 29 30 A V E -CD 24 44B 0 15,-2.7 15,-1.8 -2,-0.3 2,-0.4 -0.921 22.7-168.9-107.5 130.1 13.3 9.0 11.7 30 31 A S E +CD 23 43B 22 -7,-2.9 -7,-2.2 -2,-0.5 2,-0.3 -0.949 11.0 167.6-122.3 142.7 10.0 10.5 10.9 31 32 A F E -CD 22 42B 1 11,-3.0 11,-2.7 -2,-0.4 2,-0.3 -0.982 26.6-140.4-151.5 160.9 6.7 9.8 12.8 32 33 A T E +CD 21 41B 9 -11,-2.7 -12,-1.1 -2,-0.3 -11,-0.5 -0.917 32.9 150.3-121.6 151.4 3.2 10.9 13.3 33 34 A Y E +CD 19 40B 19 7,-2.4 7,-1.7 -2,-0.3 -14,-0.2 -0.654 14.5 99.2-151.1-153.3 1.4 11.0 16.7 34 35 A D - 0 0 36 -16,-0.9 -14,-0.1 5,-0.2 5,-0.1 -0.168 27.6-171.7 80.8-178.7 -1.4 12.7 18.8 35 36 A D S S+ 0 0 95 3,-0.1 4,-0.0 -2,-0.0 -16,-0.0 0.027 81.2 53.5-171.0 -57.1 -4.9 11.3 19.4 36 37 A N S S+ 0 0 144 2,-0.0 2,-0.1 0, 0.0 -2,-0.0 0.742 122.9 30.0 -66.1 -22.7 -7.0 13.9 21.2 37 38 A G S S- 0 0 34 1,-0.3 3,-0.1 3,-0.0 0, 0.0 -0.358 106.7 -51.9-119.8-160.7 -5.9 16.2 18.4 38 39 A K S S- 0 0 188 1,-0.2 2,-0.8 -2,-0.1 -1,-0.3 0.132 76.8 -74.4 -63.2-179.0 -4.8 16.3 14.8 39 40 A T - 0 0 58 -5,-0.1 -5,-0.2 -7,-0.1 2,-0.2 -0.823 53.6-150.6 -86.3 114.1 -2.0 14.0 13.5 40 41 A G E - D 0 33B 13 -7,-1.7 -7,-2.4 -2,-0.8 2,-0.3 -0.586 10.9-153.3 -78.0 156.7 1.0 15.6 15.0 41 42 A R E + D 0 32B 145 -9,-0.3 2,-0.3 -2,-0.2 -9,-0.2 -0.985 21.1 155.3-134.0 143.3 4.2 15.0 12.9 42 43 A G E - D 0 31B 1 -11,-2.7 -11,-3.0 -2,-0.3 2,-0.3 -0.971 19.2-162.6-159.4 170.9 7.9 14.9 13.9 43 44 A A E -BD 6 30B 22 -37,-0.5 -37,-0.8 -2,-0.3 2,-0.3 -0.967 5.9-175.9-158.9 150.7 11.3 13.7 13.1 44 45 A V E - D 0 29B 23 -15,-1.8 -15,-2.7 -2,-0.3 5,-0.1 -0.915 43.1 -76.4-143.2 163.7 14.6 13.3 14.9 45 46 A S E - D 0 28B 50 -2,-0.3 -17,-0.2 -17,-0.2 -1,-0.0 -0.321 37.3-130.6 -60.0 149.3 18.2 12.2 14.0 46 47 A E S S+ 0 0 59 -19,-2.1 3,-0.5 2,-0.2 -1,-0.1 0.759 107.4 50.7 -75.9 -22.3 18.5 8.4 13.6 47 48 A K S S+ 0 0 161 -20,-0.4 2,-0.2 1,-0.2 -1,-0.1 0.983 111.7 43.6 -76.2 -55.7 21.5 8.4 15.8 48 49 A D S S+ 0 0 103 2,-0.0 -1,-0.2 3,-0.0 -2,-0.2 0.146 87.6 123.7 -76.5 22.6 20.0 10.4 18.7 49 50 A A S S- 0 0 12 -3,-0.5 2,-0.2 -2,-0.2 -46,-0.1 -0.608 70.4-107.0 -85.7 141.7 16.7 8.5 18.6 50 51 A P >> - 0 0 35 0, 0.0 4,-1.6 0, 0.0 3,-1.3 -0.530 29.0-117.4 -68.0 134.3 15.5 6.7 21.8 51 52 A K H 3> S+ 0 0 147 1,-0.3 4,-1.7 -2,-0.2 5,-0.1 0.745 112.8 60.2 -38.5 -39.1 15.9 2.9 21.5 52 53 A E H 3> S+ 0 0 62 2,-0.2 4,-1.6 1,-0.2 -1,-0.3 0.929 104.2 47.3 -59.1 -49.0 12.2 2.5 21.9 53 54 A L H <> S+ 0 0 0 -3,-1.3 4,-2.2 1,-0.3 3,-0.3 0.924 111.1 52.5 -59.4 -42.3 11.4 4.5 18.7 54 55 A L H X S+ 0 0 53 -4,-1.6 4,-2.8 1,-0.3 -1,-0.3 0.863 106.1 54.0 -60.9 -34.2 14.1 2.5 16.9 55 56 A D H X S+ 0 0 54 -4,-1.7 4,-1.0 -5,-0.3 -1,-0.3 0.836 110.3 47.2 -66.9 -36.3 12.2 -0.6 18.2 56 57 A M H X S+ 0 0 23 -4,-1.6 4,-2.0 -3,-0.3 -2,-0.2 0.790 110.4 51.1 -72.6 -35.0 9.1 0.8 16.6 57 58 A L H X S+ 0 0 7 -4,-2.2 4,-2.0 2,-0.2 -2,-0.2 0.949 110.0 50.2 -67.0 -47.8 11.0 1.6 13.3 58 59 A A H < S+ 0 0 42 -4,-2.8 4,-0.4 1,-0.3 -2,-0.2 0.822 109.3 52.2 -58.8 -33.6 12.3 -1.9 13.2 59 60 A R H >< S+ 0 0 134 -4,-1.0 3,-1.2 1,-0.2 4,-0.4 0.943 112.0 44.9 -66.9 -47.5 8.8 -3.1 13.8 60 61 A A H 3< S+ 0 0 15 -4,-2.0 3,-0.3 1,-0.2 -2,-0.2 0.683 104.1 64.7 -69.6 -21.0 7.6 -0.9 10.8 61 62 A E T 3< S+ 0 0 92 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.593 105.4 43.6 -80.0 -9.1 10.5 -2.1 8.6 62 63 A R S < S+ 0 0 155 -3,-1.2 -1,-0.2 -4,-0.4 -2,-0.2 0.430 80.2 120.5-111.3 -7.4 9.3 -5.7 8.6 63 64 A E S S- 0 0 119 -4,-0.4 2,-0.4 -3,-0.3 -3,-0.0 -0.331 77.6-103.7 -59.2 137.5 5.6 -5.1 8.0 64 65 A K 0 0 172 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 -0.634 360.0 360.0 -69.1 127.7 4.6 -6.8 4.8 65 66 A K 0 0 230 -2,-0.4 -2,-0.0 -3,-0.1 0, 0.0 0.058 360.0 360.0 66.7 360.0 4.2 -4.2 2.0