==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER COLLAGEN 29-MAR-94 1CAG . COMPND 2 MOLECULE: COLLAGEN-LIKE PEPTIDE; . AUTHOR J.BELLA,M.EATON,B.BRODSKY,H.M.BERMAN . 88 3 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5516.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 29 33.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A P 0 0 111 0, 0.0 63,-1.7 0, 0.0 62,-0.6 0.000 360.0 360.0 360.0 135.0 4.7 3.7 8.5 2 2 A X - 0 0 95 61,-0.3 33,-0.2 31,-0.2 34,-0.1 -0.223 360.0-111.2 -57.4 140.3 8.2 3.0 7.0 3 3 A G - 0 0 7 31,-1.9 64,-0.1 62,-0.6 -1,-0.1 -0.007 46.3 -61.8 -70.2 178.7 10.3 -0.0 8.1 4 4 A P - 0 0 53 0, 0.0 63,-2.1 0, 0.0 32,-0.4 0.042 64.7 -79.4 -55.7 160.1 13.6 -0.1 10.2 5 5 A X - 0 0 108 61,-0.2 34,-0.2 31,-0.1 33,-0.2 -0.298 54.7-103.7 -61.5 151.9 16.9 1.4 9.1 6 6 A G - 0 0 5 31,-2.0 63,-0.2 62,-0.3 -1,-0.1 -0.237 46.3 -83.1 -72.7 165.3 18.9 -0.8 6.7 7 7 A P - 0 0 63 0, 0.0 63,-2.4 0, 0.0 32,-0.3 -0.083 58.8 -73.5 -70.3 171.9 21.9 -2.8 7.8 8 8 A X - 0 0 103 31,-0.2 33,-0.2 61,-0.2 34,-0.2 -0.367 54.9-114.8 -59.4 146.2 25.5 -1.4 8.2 9 9 A G - 0 0 4 31,-2.4 63,-0.2 62,-0.4 -1,-0.1 -0.176 44.5 -77.5 -73.7 171.4 27.2 -0.8 4.9 10 10 A P - 0 0 62 0, 0.0 63,-2.6 0, 0.0 32,-0.4 -0.214 61.3 -67.4 -72.4 163.9 30.2 -2.8 3.9 11 11 A X - 0 0 102 61,-0.2 33,-0.2 31,-0.2 34,-0.1 0.024 57.6-111.0 -36.5 145.0 33.8 -2.5 5.1 12 12 A G - 0 0 7 31,-1.7 63,-0.2 60,-0.2 3,-0.1 -0.088 50.9 -58.5 -72.5-177.2 35.7 0.7 4.1 13 13 A P S S- 0 0 59 0, 0.0 32,-0.6 0, 0.0 63,-0.4 -0.239 72.5 -81.3 -61.4 144.7 38.5 0.9 1.7 14 14 A X - 0 0 137 1,-0.1 62,-0.1 -3,-0.1 3,-0.1 -0.265 49.4-111.5 -51.5 130.5 41.7 -1.1 2.5 15 15 A A - 0 0 8 31,-0.5 63,-0.1 -3,-0.1 -1,-0.1 -0.452 45.0-107.3 -60.6 130.9 43.8 0.8 5.1 16 16 A P - 0 0 48 0, 0.0 63,-2.2 0, 0.0 32,-0.1 -0.023 34.2 -92.5 -64.5 169.0 47.0 1.8 3.2 17 17 A X - 0 0 96 61,-0.2 33,-0.2 31,-0.2 34,-0.2 -0.409 55.1 -94.6 -71.2 158.0 50.4 0.2 3.6 18 18 A G - 0 0 8 31,-2.4 63,-0.2 62,-0.4 -1,-0.1 0.017 42.5 -79.9 -71.3 179.3 52.6 1.9 6.2 19 19 A P - 0 0 61 0, 0.0 63,-2.0 0, 0.0 32,-0.5 -0.340 64.7 -82.1 -70.5 157.9 55.3 4.5 5.9 20 20 A X - 0 0 96 61,-0.2 33,-0.2 31,-0.2 34,-0.2 -0.193 51.6-106.7 -56.2 157.4 58.8 3.3 4.7 21 21 A G - 0 0 10 31,-1.8 63,-0.2 62,-0.5 -1,-0.1 -0.087 44.8 -81.6 -71.8-174.8 61.0 1.8 7.4 22 22 A P - 0 0 57 0, 0.0 63,-1.9 0, 0.0 32,-0.5 -0.315 55.8 -77.0 -85.5 170.1 64.1 3.5 8.8 23 23 A X - 0 0 90 61,-0.2 34,-0.3 31,-0.2 33,-0.2 -0.213 56.6-108.4 -59.0 155.6 67.5 3.7 7.3 24 24 A G - 0 0 8 31,-1.4 63,-0.2 62,-0.5 2,-0.1 -0.083 40.6 -78.3 -77.3-176.1 69.6 0.6 7.7 25 25 A P - 0 0 64 0, 0.0 63,-3.0 0, 0.0 32,-0.4 -0.514 62.0 -78.0 -82.1 153.9 72.6 0.0 10.0 26 26 A X - 0 0 96 61,-0.2 33,-0.2 31,-0.2 34,-0.1 -0.030 51.7-110.2 -48.0 154.4 76.1 1.3 9.0 27 27 A G - 0 0 11 31,-2.3 63,-0.1 62,-0.7 -1,-0.1 -0.251 51.6 -57.9 -83.3 173.6 78.2 -0.6 6.5 28 28 A P 0 0 67 0, 0.0 -1,-0.2 0, 0.0 32,-0.1 -0.143 360.0 360.0 -48.4 146.0 81.3 -2.7 7.1 29 29 A X 0 0 182 61,-0.2 61,-0.1 -3,-0.1 31,-0.1 -0.357 360.0 360.0 -58.5 360.0 84.2 -0.6 8.6 30 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 31 31 B P 0 0 155 0, 0.0 2,-0.2 0, 0.0 33,-0.1 0.000 360.0 360.0 360.0 133.6 1.7 -3.3 3.3 32 32 B X - 0 0 87 31,-0.2 32,-0.4 -31,-0.1 3,-0.0 -0.501 360.0-121.8 -39.4 -80.0 4.2 -3.5 5.1 33 33 B G - 0 0 33 -2,-0.2 2,-0.2 30,-0.2 -31,-0.2 -0.835 48.7 -28.6-175.0-151.3 4.7 0.2 4.2 34 34 B P S S- 0 0 62 0, 0.0 -31,-1.9 0, 0.0 30,-0.3 -0.555 76.9 -95.5 -79.9 153.1 7.4 2.3 2.5 35 35 B X - 0 0 97 -33,-0.2 31,-0.2 -2,-0.2 32,-0.1 -0.348 43.5-111.2 -63.9 146.8 11.0 0.9 2.9 36 36 B G - 0 0 7 29,-2.3 -31,-0.1 -32,-0.4 -1,-0.1 -0.098 43.1 -73.6 -69.2 176.2 13.1 2.4 5.7 37 37 B P - 0 0 72 0, 0.0 -31,-2.0 0, 0.0 30,-0.4 -0.213 60.6 -85.5 -66.8 159.6 16.2 4.7 5.4 38 38 B X - 0 0 98 -33,-0.2 31,-0.2 29,-0.1 32,-0.2 -0.184 54.4 -97.2 -60.5 162.4 19.5 3.3 4.2 39 39 B G - 0 0 7 29,-1.8 -31,-0.2 -32,-0.3 -1,-0.1 -0.141 45.0 -80.8 -73.3 175.6 21.7 1.7 6.8 40 40 B P - 0 0 59 0, 0.0 -31,-2.4 0, 0.0 30,-0.3 -0.253 59.2 -77.9 -74.0 163.1 24.7 3.4 8.7 41 41 B X - 0 0 97 -33,-0.2 31,-0.2 29,-0.1 32,-0.2 -0.344 56.4-110.4 -60.8 141.1 28.2 3.7 7.2 42 42 B G - 0 0 8 29,-2.5 -31,-0.2 -32,-0.4 -1,-0.1 0.114 37.1 -90.0 -60.1-177.7 30.1 0.4 7.4 43 43 B P - 0 0 62 0, 0.0 -31,-1.7 0, 0.0 30,-0.3 -0.294 50.1 -85.2 -83.7 177.1 33.1 -0.1 9.7 44 44 B X - 0 0 88 -33,-0.2 31,-0.1 29,-0.1 -30,-0.1 -0.429 46.9-103.8 -74.9 161.2 36.9 0.6 8.7 45 45 B A - 0 0 9 -32,-0.6 3,-0.1 29,-0.3 -1,-0.1 -0.514 56.3 -82.4 -81.1 157.7 38.9 -2.2 6.8 46 46 B P - 0 0 103 0, 0.0 -31,-0.5 0, 0.0 -1,-0.2 0.175 68.2 -54.7 -60.0 179.3 41.3 -4.0 9.2 47 47 B X - 0 0 148 1,-0.1 32,-0.1 -3,-0.1 31,-0.1 -0.388 68.2-114.0 -55.7 126.7 44.9 -2.8 10.2 48 48 B G - 0 0 14 29,-0.5 -31,-0.2 -3,-0.1 -1,-0.1 -0.057 28.6 -93.8 -62.0 158.6 47.0 -2.0 7.1 49 49 B P - 0 0 62 0, 0.0 -31,-2.4 0, 0.0 30,-0.3 -0.263 49.2 -94.7 -69.3 154.1 50.2 -3.9 5.9 50 50 B X - 0 0 101 -33,-0.2 31,-0.2 29,-0.2 32,-0.2 -0.301 44.7-104.0 -69.8 160.8 53.5 -2.5 6.9 51 51 B G - 0 0 9 29,-2.2 -31,-0.2 -32,-0.5 -1,-0.1 -0.009 43.4 -82.3 -68.8-175.2 55.3 -0.2 4.6 52 52 B P - 0 0 66 0, 0.0 -31,-1.8 0, 0.0 30,-0.4 -0.220 64.0 -66.2 -79.7 172.9 58.3 -1.1 2.3 53 53 B X - 0 0 99 -33,-0.2 31,-0.2 29,-0.2 32,-0.2 -0.262 51.6-113.8 -62.2 153.1 61.9 -1.2 3.5 54 54 B G - 0 0 6 29,-2.7 -31,-0.2 -32,-0.5 -1,-0.1 -0.149 44.4 -83.5 -73.9 176.6 63.7 2.0 4.6 55 55 B P - 0 0 67 0, 0.0 -31,-1.4 0, 0.0 30,-0.6 -0.154 62.9 -68.0 -75.7 177.5 66.6 3.3 2.6 56 56 B X - 0 0 94 -33,-0.2 31,-0.2 29,-0.1 32,-0.2 -0.199 54.4-105.3 -62.6 159.8 70.3 2.0 3.1 57 57 B G - 0 0 5 29,-2.3 -31,-0.2 -32,-0.4 -1,-0.1 -0.179 45.5 -75.3 -74.6 172.3 72.3 2.6 6.2 58 58 B P - 0 0 57 0, 0.0 -31,-2.3 0, 0.0 30,-0.3 -0.223 58.5 -77.0 -69.8 158.0 75.2 5.0 6.7 59 59 B X 0 0 121 -33,-0.2 31,-0.2 29,-0.2 29,-0.1 -0.021 360.0 360.0 -55.4 151.7 78.8 4.7 5.4 60 60 B G 0 0 46 29,-1.6 -1,-0.1 -34,-0.1 30,-0.1 -0.497 360.0 360.0-132.6 360.0 81.7 2.5 6.8 61 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 62 61 C P 0 0 96 0, 0.0 2,-0.2 0, 0.0 -29,-0.1 0.000 360.0 360.0 360.0 155.1 3.6 -2.3 8.5 63 62 C X - 0 0 93 -62,-0.6 -61,-0.3 -29,-0.1 -31,-0.2 0.630 360.0-118.2 -61.2 165.3 6.2 -1.4 9.4 64 63 C G - 0 0 3 -63,-1.7 -29,-0.2 -32,-0.4 -1,-0.1 -0.059 46.1 -73.4 -61.6 177.7 7.4 -1.2 5.8 65 64 C P - 0 0 47 0, 0.0 -29,-2.3 0, 0.0 -62,-0.6 -0.411 61.6 -86.3 -75.2 159.7 10.4 -3.4 4.9 66 65 C X - 0 0 88 -31,-0.2 -61,-0.2 1,-0.1 -60,-0.1 -0.293 49.3-107.5 -60.5 149.4 13.9 -2.5 6.2 67 66 C G - 0 0 6 -63,-2.1 -29,-0.1 -30,-0.4 -1,-0.1 -0.085 42.2 -86.8 -68.4 172.3 15.9 -0.1 4.1 68 67 C P - 0 0 66 0, 0.0 -29,-1.8 0, 0.0 -62,-0.3 -0.109 60.9 -63.9 -74.9 174.9 18.9 -1.1 2.0 69 68 C X - 0 0 100 -31,-0.2 -61,-0.2 -63,-0.2 -60,-0.2 -0.311 55.0-119.1 -63.1 144.0 22.5 -1.4 3.1 70 69 C G - 0 0 7 -63,-2.4 -29,-0.1 -30,-0.3 3,-0.1 -0.062 44.4 -70.2 -70.1-179.9 24.2 1.8 4.2 71 70 C P - 0 0 60 0, 0.0 -29,-2.5 0, 0.0 -62,-0.4 -0.206 60.3 -77.5 -74.4 163.6 27.2 3.2 2.4 72 71 C X - 0 0 102 -31,-0.2 -60,-0.2 -63,-0.2 -61,-0.2 -0.236 58.7 -97.0 -56.8 146.3 30.9 1.8 2.5 73 72 C G - 0 0 7 -63,-2.6 -29,-0.1 -30,-0.3 -1,-0.1 -0.018 44.5 -84.9 -61.7 168.9 32.9 2.5 5.6 74 73 C P - 0 0 58 0, 0.0 -29,-0.3 0, 0.0 -62,-0.2 -0.244 53.7 -83.0 -73.3 165.4 35.4 5.3 6.1 75 74 C X - 0 0 118 -63,-0.2 -60,-0.1 -31,-0.1 -61,-0.1 -0.316 46.7-134.5 -61.0 149.1 39.1 5.2 5.1 76 75 C A - 0 0 17 -63,-0.4 -1,-0.1 1,-0.1 2,-0.1 -0.510 24.8 -90.9-103.5 169.0 41.3 3.5 7.6 77 76 C P - 0 0 95 0, 0.0 -29,-0.5 0, 0.0 -1,-0.1 -0.363 52.0 -85.6 -78.7 158.7 44.8 4.7 8.9 78 77 C X - 0 0 101 -63,-0.1 -61,-0.2 1,-0.1 -60,-0.2 -0.372 47.6-105.4 -61.1 152.6 48.1 3.7 7.2 79 78 C G - 0 0 10 -63,-2.2 -29,-0.2 -30,-0.3 -1,-0.1 0.118 51.2 -73.8 -57.1-179.3 49.7 0.4 8.2 80 79 C P - 0 0 60 0, 0.0 -29,-2.2 0, 0.0 -62,-0.4 -0.303 62.9 -73.9 -81.8 164.2 52.8 0.4 10.4 81 80 C X - 0 0 100 -31,-0.2 -60,-0.2 -63,-0.2 -61,-0.2 -0.224 51.3-115.6 -56.9 151.9 56.4 1.4 9.3 82 81 C G - 0 0 7 -63,-2.0 -29,-0.2 -30,-0.4 -1,-0.1 -0.177 42.5 -72.7 -78.1 174.8 58.3 -1.0 7.1 83 82 C P - 0 0 66 0, 0.0 -29,-2.7 0, 0.0 -62,-0.5 -0.285 56.9 -91.3 -66.8 154.4 61.6 -2.8 8.0 84 83 C X - 0 0 90 -31,-0.2 -61,-0.2 -63,-0.2 -60,-0.2 -0.341 50.9-113.8 -59.7 154.4 64.9 -0.9 8.3 85 84 C G - 0 0 9 -63,-1.9 -29,-0.1 -30,-0.6 -1,-0.1 -0.032 45.6 -60.3 -80.9-172.6 66.7 -1.0 4.9 86 85 C P - 0 0 66 0, 0.0 -29,-2.3 0, 0.0 -62,-0.5 -0.141 67.4 -78.6 -68.2 166.5 70.0 -2.7 4.0 87 86 C X - 0 0 95 -31,-0.2 -61,-0.2 -63,-0.2 -60,-0.2 -0.334 56.4-107.7 -62.9 143.4 73.4 -2.0 5.8 88 87 C G - 0 0 7 -63,-3.0 2,-0.2 -30,-0.3 -29,-0.2 0.103 50.4 -63.5 -62.3-175.6 75.0 1.1 4.5 89 88 C P 0 0 60 0, 0.0 -29,-1.6 0, 0.0 -62,-0.7 -0.509 360.0 360.0 -77.8 139.3 78.0 1.2 2.3 90 89 C X 0 0 125 -31,-0.2 -61,-0.2 -2,-0.2 -31,-0.1 -0.479 360.0 360.0 -75.1 360.0 81.4 -0.2 3.7