==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 17-NOV-98 3CAO . COMPND 2 MOLECULE: CYTOCHROME C3; . SOURCE 2 ORGANISM_SCIENTIFIC: DESULFOVIBRIO AFRICANUS; . AUTHOR S.NORAGER,P.LEGRAND,L.PIEULLE,C.HATCHIKIAN,M.ROTH . 103 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8270.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 56.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 6.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 8.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 13 12.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 23 22.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 3.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A X > 0 0 119 0, 0.0 3,-2.1 0, 0.0 24,-0.5 0.000 360.0 360.0 360.0 21.1 1.2 81.3 43.1 2 2 A E T 3 + 0 0 145 1,-0.3 24,-0.1 22,-0.1 23,-0.1 0.799 360.0 50.0 -68.1 -21.0 -0.2 81.1 46.5 3 3 A D T 3 S+ 0 0 139 22,-0.0 -1,-0.3 21,-0.0 2,-0.2 0.529 82.6 120.1 -94.3 6.5 -3.5 82.6 45.3 4 4 A M < + 0 0 53 -3,-2.1 21,-0.2 1,-0.2 20,-0.2 -0.375 23.9 160.6 -75.6 133.9 -3.9 80.1 42.4 5 5 A T + 0 0 74 1,-0.4 17,-2.4 18,-0.2 2,-0.3 0.543 66.8 22.9-126.9 -19.4 -7.0 77.9 42.6 6 6 A H B S-A 21 0A 80 15,-0.3 -1,-0.4 17,-0.0 15,-0.2 -0.976 90.7 -91.7-138.3 163.2 -7.4 76.8 38.9 7 7 A V - 0 0 20 13,-2.2 13,-0.2 -2,-0.3 15,-0.0 -0.454 56.2 -94.6 -71.0 141.0 -4.9 76.4 36.0 8 8 A P + 0 0 79 0, 0.0 -1,-0.1 0, 0.0 12,-0.1 -0.271 43.9 177.5 -51.5 140.6 -4.8 79.6 33.9 9 9 A T > + 0 0 41 -3,-0.1 3,-2.1 2,-0.1 4,-0.5 0.462 48.9 100.8-132.5 -2.4 -7.1 79.3 30.9 10 10 A D G > S+ 0 0 160 1,-0.3 3,-1.7 2,-0.2 -1,-0.0 0.866 78.8 61.4 -57.8 -39.1 -6.9 82.7 29.0 11 11 A A G 3 S+ 0 0 46 1,-0.3 -1,-0.3 2,-0.0 54,-0.1 0.687 97.9 59.0 -61.7 -22.1 -4.5 81.2 26.4 12 12 A F G < S- 0 0 60 -3,-2.1 -1,-0.3 1,-0.3 -2,-0.2 0.617 87.5-158.1 -78.2 -20.1 -7.2 78.7 25.3 13 13 A G < + 0 0 52 -3,-1.7 -1,-0.3 -4,-0.5 2,-0.2 -0.455 68.0 24.9 68.5-139.2 -9.9 81.3 24.3 14 14 A K S S- 0 0 205 -2,-0.1 2,-0.3 1,-0.1 -4,-0.0 -0.297 87.2-139.2 -62.9 123.7 -13.3 79.8 24.3 15 15 A L - 0 0 74 -2,-0.2 -1,-0.1 1,-0.1 4,-0.1 -0.602 22.8-167.7 -85.3 141.6 -13.4 76.8 26.7 16 16 A E S S+ 0 0 173 -2,-0.3 -1,-0.1 2,-0.1 -2,-0.1 0.712 79.5 35.7 -76.7 -42.0 -15.1 73.4 26.2 17 17 A R S S- 0 0 113 1,-0.1 3,-0.1 85,-0.0 84,-0.1 -0.856 94.5 -88.2-118.5 157.3 -14.6 72.4 29.8 18 18 A P - 0 0 36 0, 0.0 84,-0.1 0, 0.0 -1,-0.1 -0.249 62.0 -84.3 -49.8 148.8 -14.5 73.9 33.2 19 19 A A - 0 0 31 82,-0.1 82,-0.4 1,-0.1 2,-0.3 -0.358 54.0-102.8 -58.0 141.4 -11.2 75.3 34.4 20 20 A A - 0 0 22 -13,-0.2 -13,-2.2 80,-0.2 80,-0.2 -0.499 34.6-115.0 -68.5 129.3 -9.0 72.5 35.9 21 21 A V B +A 6 0A 77 78,-2.4 -15,-0.3 -2,-0.3 2,-0.1 -0.377 50.5 152.6 -62.8 132.7 -8.9 72.6 39.7 22 22 A F - 0 0 42 -17,-2.4 2,-1.5 -2,-0.1 3,-0.1 -0.529 28.4-173.1-167.9 82.4 -5.4 73.3 40.9 23 23 A N > - 0 0 64 1,-0.2 4,-3.4 -2,-0.1 5,-0.3 -0.795 27.6-156.1 -79.9 91.4 -4.7 75.0 44.2 24 24 A H H > S+ 0 0 26 -2,-1.5 4,-2.4 1,-0.2 5,-0.2 0.823 80.8 36.7 -40.1 -59.6 -1.0 75.2 43.3 25 25 A D H > S+ 0 0 59 -24,-0.5 4,-1.7 -21,-0.2 -1,-0.2 0.912 120.6 45.7 -72.8 -35.2 0.7 75.4 46.7 26 26 A E H > S+ 0 0 95 1,-0.2 4,-2.6 -3,-0.2 5,-0.2 0.947 113.6 51.2 -70.5 -37.4 -1.7 73.0 48.5 27 27 A H H X S+ 0 0 55 -4,-3.4 4,-3.0 1,-0.2 5,-0.2 0.913 110.2 47.7 -57.2 -53.6 -1.5 70.6 45.6 28 28 A N H X>S+ 0 0 35 -4,-2.4 5,-2.4 -5,-0.3 4,-0.6 0.834 112.6 49.6 -66.4 -38.3 2.3 70.5 45.5 29 29 A E H ><5S+ 0 0 137 -4,-1.7 3,-0.7 -5,-0.2 -1,-0.2 0.950 114.0 44.0 -59.7 -48.0 2.5 70.0 49.3 30 30 A K H 3<5S+ 0 0 182 -4,-2.6 -2,-0.2 1,-0.3 -3,-0.2 0.928 114.8 49.4 -69.2 -37.1 -0.1 67.2 49.3 31 31 A A H 3<5S- 0 0 44 -4,-3.0 -1,-0.3 -5,-0.2 -2,-0.2 0.601 109.2-125.9 -75.4 -13.3 1.6 65.5 46.3 32 32 A G T <<5 + 0 0 52 -3,-0.7 2,-0.8 -4,-0.6 -3,-0.2 0.875 49.9 161.4 73.9 32.3 5.0 65.8 47.9 33 33 A I < + 0 0 48 -5,-2.4 -1,-0.2 -6,-0.2 -2,-0.1 -0.821 9.8 165.5 -91.3 115.8 6.5 67.6 45.0 34 34 A E + 0 0 179 -2,-0.8 2,-0.6 1,-0.1 -1,-0.2 0.702 54.2 76.0-100.4 -29.4 9.7 69.4 46.1 35 35 A S > - 0 0 71 1,-0.1 3,-1.8 2,-0.0 4,-0.3 -0.830 63.0-156.5 -91.4 121.3 11.3 70.2 42.7 36 36 A C G >> S+ 0 0 72 -2,-0.6 4,-2.7 1,-0.3 3,-1.7 0.830 91.7 64.9 -63.6 -35.1 9.8 73.1 40.9 37 37 A N G 34 S+ 0 0 37 1,-0.3 -1,-0.3 2,-0.2 5,-0.1 0.560 72.7 89.5 -77.2 8.4 11.1 71.8 37.6 38 38 A A G <4 S+ 0 0 55 -3,-1.8 -1,-0.3 1,-0.1 -2,-0.2 0.859 119.6 3.1 -52.8 -38.3 8.9 68.7 37.9 39 39 A C T <4 S+ 0 0 45 -3,-1.7 2,-2.0 -4,-0.3 -2,-0.2 0.666 128.7 62.5-114.4 -46.9 6.5 71.1 36.0 40 40 A H S < S+ 0 0 50 -4,-2.7 14,-1.8 -5,-0.1 15,-0.4 -0.539 81.3 171.2 -84.8 75.5 8.4 74.3 35.3 41 41 A H - 0 0 53 -2,-2.0 2,-0.5 12,-0.2 12,-0.1 -0.340 34.7-140.4 -92.0 165.8 10.9 72.6 33.1 42 42 A V - 0 0 25 7,-0.4 7,-3.1 10,-0.3 2,-0.5 -0.970 21.6-179.9-123.8 103.6 13.7 73.9 30.8 43 43 A W E +B 48 0B 144 -2,-0.5 2,-0.4 5,-0.2 5,-0.2 -0.972 4.8 172.1-104.8 125.4 14.0 71.9 27.6 44 44 A V E > -B 47 0B 86 3,-2.2 3,-1.5 -2,-0.5 -2,-0.0 -0.975 67.5 -16.5-137.3 117.8 16.8 73.0 25.2 45 45 A N T 3 S- 0 0 163 -2,-0.4 3,-0.1 1,-0.3 -1,-0.1 0.859 127.4 -51.8 59.4 41.1 17.8 71.2 22.0 46 46 A G T 3 S+ 0 0 63 1,-0.2 2,-0.5 0, 0.0 -1,-0.3 0.569 114.9 114.2 75.1 13.6 16.1 68.0 23.2 47 47 A V E < -B 44 0B 99 -3,-1.5 -3,-2.2 2,-0.0 2,-0.6 -0.961 60.1-139.4-121.7 126.1 17.8 68.0 26.6 48 48 A L E -B 43 0B 78 -2,-0.5 2,-0.3 -5,-0.2 -5,-0.2 -0.729 21.5-128.8 -84.1 121.6 16.0 68.4 29.9 49 49 A A - 0 0 18 -7,-3.1 -7,-0.4 -2,-0.6 3,-0.4 -0.447 17.4-164.4 -75.4 125.6 17.9 70.6 32.3 50 50 A E S S+ 0 0 173 -2,-0.3 -1,-0.2 1,-0.2 -13,-0.1 0.795 85.5 33.1 -80.7 -25.3 18.1 68.8 35.6 51 51 A D S S+ 0 0 164 -9,-0.1 2,-0.3 -14,-0.0 -1,-0.2 -0.117 107.5 71.9-126.2 20.5 19.1 71.8 37.7 52 52 A E - 0 0 117 -3,-0.4 -10,-0.3 -10,-0.1 2,-0.3 -0.960 55.6-170.0-123.2 160.1 17.3 74.7 36.0 53 53 A D - 0 0 75 -2,-0.3 -12,-0.2 -12,-0.1 -16,-0.1 -0.904 28.4-133.5-145.9 171.2 13.6 75.7 35.9 54 54 A S > + 0 0 30 -14,-1.8 3,-2.4 -2,-0.3 -13,-0.2 -0.060 40.6 163.6-113.6 30.3 11.3 78.0 34.1 55 55 A V T 3 + 0 0 81 -15,-0.4 -2,-0.1 1,-0.3 -18,-0.0 -0.283 69.0 26.5 -49.8 133.3 9.4 79.3 37.2 56 56 A G T 3 S+ 0 0 73 1,-0.3 -1,-0.3 0, 0.0 -16,-0.0 0.380 95.8 104.5 97.8 -24.8 7.5 82.5 36.2 57 57 A T S < S- 0 0 59 -3,-2.4 -1,-0.3 3,-0.0 -3,-0.1 -0.966 74.8-124.2 -90.2 121.8 7.3 81.7 32.5 58 58 A P > - 0 0 65 0, 0.0 3,-1.7 0, 0.0 4,-0.5 -0.355 14.7-122.6 -57.0 149.7 3.7 80.6 31.6 59 59 A C G >> S+ 0 0 43 1,-0.3 4,-1.8 2,-0.2 3,-1.8 0.901 113.0 62.4 -58.3 -37.8 3.4 77.2 29.9 60 60 A S G 34 S+ 0 0 50 1,-0.3 -1,-0.3 2,-0.2 5,-0.1 0.619 87.2 70.4 -69.5 -11.0 1.7 79.0 27.1 61 61 A D G <4 S+ 0 0 113 -3,-1.7 -1,-0.3 1,-0.2 -2,-0.2 0.733 117.5 21.4 -70.2 -33.4 4.9 81.1 26.3 62 62 A C T <4 S+ 0 0 92 -3,-1.8 2,-0.7 -4,-0.5 -2,-0.2 0.553 118.9 65.1-105.8 -17.3 6.5 77.9 25.0 63 63 A H < - 0 0 24 -4,-1.8 -1,-0.2 -5,-0.2 10,-0.1 -0.947 67.7-162.6-114.5 100.0 3.5 75.7 24.2 64 64 A A - 0 0 62 -2,-0.7 10,-1.8 2,-0.4 4,-0.1 -0.343 39.0-101.0 -64.1 173.3 1.3 77.1 21.4 65 65 A L S S+ 0 0 99 8,-0.3 2,-0.4 9,-0.1 10,-0.3 0.822 110.3 57.6 -63.7 -38.0 -2.2 75.7 21.0 66 66 A E S S- 0 0 155 7,-0.1 -2,-0.4 6,-0.1 5,-0.0 -0.829 98.4-102.8 -92.4 148.3 -0.9 73.6 18.1 67 67 A Q - 0 0 120 -2,-0.4 2,-0.4 6,-0.1 3,-0.1 -0.215 29.0-159.3 -59.2 143.6 1.9 71.1 18.4 68 68 A D B > -C 71 0C 124 3,-2.6 3,-2.2 -4,-0.1 2,-0.4 -0.851 60.2 -53.7-131.1 102.9 5.2 72.2 16.9 69 69 A G T 3 S- 0 0 58 -2,-0.4 -2,-0.0 1,-0.3 -1,-0.0 -0.577 121.8 -23.1 63.9-126.4 7.5 69.3 16.1 70 70 A D T 3 S+ 0 0 147 -2,-0.4 -1,-0.3 -3,-0.1 -3,-0.0 0.339 113.3 107.8-100.9 17.8 7.7 67.3 19.3 71 71 A T B < S-C 68 0C 57 -3,-2.2 -3,-2.6 -5,-0.0 -7,-0.1 -0.784 75.2-127.1 -88.3 118.1 6.7 70.3 21.5 72 72 A P - 0 0 25 0, 0.0 -8,-0.2 0, 0.0 -6,-0.1 -0.232 18.4-108.6 -67.1 148.2 3.2 69.4 22.5 73 73 A G > - 0 0 3 -8,-0.2 4,-2.8 -10,-0.1 -8,-0.3 -0.365 44.6 -94.5 -61.2 175.1 0.3 71.9 22.0 74 74 A L H > S+ 0 0 3 -10,-1.8 4,-2.4 1,-0.2 5,-0.3 0.888 122.4 47.7 -69.8 -40.8 -0.9 73.5 25.2 75 75 A Q H > S+ 0 0 112 -10,-0.3 4,-2.7 1,-0.2 -1,-0.2 0.952 115.8 46.2 -60.3 -49.4 -3.8 71.1 26.0 76 76 A D H > S+ 0 0 71 -11,-0.2 4,-3.0 1,-0.2 5,-0.3 0.916 109.0 56.0 -62.3 -39.4 -1.6 68.1 25.3 77 77 A A H X S+ 0 0 15 -4,-2.8 4,-2.2 1,-0.2 5,-0.2 0.925 110.9 43.6 -58.4 -49.9 1.2 69.6 27.5 78 78 A Y H X>S+ 0 0 44 -4,-2.4 4,-2.8 2,-0.2 5,-0.7 0.900 114.7 48.9 -61.6 -46.3 -1.2 70.0 30.4 79 79 A H H X>S+ 0 0 58 -4,-2.7 5,-2.1 -5,-0.3 4,-0.8 0.967 113.2 46.8 -60.0 -45.5 -2.7 66.5 30.0 80 80 A Q H <5S+ 0 0 124 -4,-3.0 -2,-0.2 3,-0.2 -1,-0.2 0.891 120.4 39.0 -62.2 -40.4 0.7 64.8 29.7 81 81 A Q H X5S+ 0 0 53 -4,-2.2 4,-1.3 -5,-0.3 -2,-0.2 0.966 128.7 27.4 -71.7 -56.8 2.1 66.7 32.7 82 82 A C H X5S+ 0 0 46 -4,-2.8 4,-1.8 -5,-0.2 -3,-0.2 0.970 131.9 32.3 -74.2 -61.7 -0.9 66.6 35.0 83 83 A W H XS+ 0 0 24 -4,-1.8 5,-1.5 1,-0.2 4,-0.9 0.923 112.6 44.9 -61.5 -37.5 -1.6 61.0 38.3 87 87 A E H <5S+ 0 0 138 -4,-2.7 3,-0.4 1,-0.2 -1,-0.2 0.935 112.9 50.7 -71.5 -38.1 -1.6 57.9 36.1 88 88 A K H <5S+ 0 0 170 -4,-2.4 -2,-0.2 -5,-0.3 -1,-0.2 0.883 121.0 33.2 -63.0 -42.2 2.1 57.1 36.8 89 89 A Q H <5S- 0 0 86 -4,-2.7 -1,-0.2 2,-0.2 -2,-0.2 0.481 101.6-130.0 -93.4 -9.6 1.7 57.4 40.6 90 90 A A T <5S+ 0 0 90 -4,-0.9 2,-0.3 -3,-0.4 -3,-0.2 0.898 74.1 106.8 58.0 39.6 -1.8 56.1 40.7 91 91 A K < + 0 0 147 -5,-1.5 -2,-0.2 -6,-0.2 -1,-0.2 -0.987 56.6 28.7-143.1 146.2 -2.9 59.1 42.8 92 92 A G S S- 0 0 49 -2,-0.3 2,-0.1 -3,-0.1 6,-0.0 -0.089 98.7 -32.5 83.9 167.2 -5.0 62.2 41.9 93 93 A P + 0 0 48 0, 0.0 -7,-0.2 0, 0.0 -6,-0.1 -0.351 48.5 163.0 -70.5 128.1 -7.7 62.7 39.4 94 94 A V + 0 0 66 -2,-0.1 2,-0.4 -8,-0.1 -7,-0.0 0.454 52.2 89.2-124.4 -1.5 -7.7 60.8 36.2 95 95 A M S >> S- 0 0 127 1,-0.1 3,-2.0 -12,-0.0 4,-0.8 -0.792 81.3-122.3 -94.2 148.9 -11.3 61.3 35.1 96 96 A C H >> S+ 0 0 76 -2,-0.4 4,-2.8 1,-0.3 3,-1.0 0.815 109.9 45.6 -55.8 -51.2 -12.2 64.3 32.9 97 97 A G H 34 S+ 0 0 49 1,-0.2 5,-0.3 2,-0.2 -1,-0.3 0.495 101.8 67.4 -79.6 2.4 -14.8 65.8 35.2 98 98 A E H <4 S+ 0 0 113 -3,-2.0 -1,-0.2 3,-0.1 -2,-0.2 0.644 116.1 26.5 -88.6 -22.4 -12.6 65.3 38.3 99 99 A C H << S+ 0 0 29 -3,-1.0 -78,-2.4 -4,-0.8 2,-1.7 0.726 124.8 49.7 -96.6 -50.8 -10.2 67.9 37.0 100 100 A H S < S- 0 0 42 -4,-2.8 2,-0.2 -5,-0.2 -80,-0.2 -0.520 90.1-169.8 -88.3 75.5 -12.6 69.9 35.0 101 101 A V - 0 0 45 -2,-1.7 2,-0.8 -82,-0.4 -3,-0.1 -0.381 20.9-141.2 -82.7 127.0 -15.1 70.1 37.8 102 102 A K 0 0 184 -5,-0.3 -1,-0.1 -2,-0.2 -2,-0.0 -0.837 360.0 360.0 -82.8 100.6 -18.6 71.4 37.1 103 103 A N 0 0 194 -2,-0.8 0, 0.0 0, 0.0 0, 0.0 -0.890 360.0 360.0-145.8 360.0 -19.4 73.5 40.2