==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 17-NOV-98 3CAR . COMPND 2 MOLECULE: CYTOCHROME C3; . SOURCE 2 ORGANISM_SCIENTIFIC: DESULFOVIBRIO AFRICANUS; . AUTHOR S.NORAGER,P.LEGRAND,L.PIEULLE,C.HATCHIKIAN,M.ROTH . 103 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8258.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 59 57.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 8.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 8.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 14 13.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 22 21.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 3.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A X > 0 0 117 0, 0.0 3,-2.3 0, 0.0 24,-0.5 0.000 360.0 360.0 360.0 28.5 80.4 53.1 10.6 2 2 A E T 3 + 0 0 144 1,-0.3 24,-0.1 22,-0.1 23,-0.1 0.883 360.0 48.9 -71.6 -13.3 80.5 54.1 7.5 3 3 A D T 3 S+ 0 0 144 22,-0.0 -1,-0.3 21,-0.0 2,-0.2 0.443 84.2 120.5 -93.2 0.8 79.0 57.4 8.6 4 4 A M < + 0 0 51 -3,-2.3 21,-0.2 1,-0.2 20,-0.2 -0.500 22.9 158.8 -71.4 133.4 81.5 57.8 11.5 5 5 A T + 0 0 74 1,-0.4 17,-2.4 18,-0.2 2,-0.3 0.487 68.5 25.3-129.4 -10.6 83.6 60.9 11.4 6 6 A H B S-A 21 0A 78 15,-0.3 -1,-0.4 16,-0.1 15,-0.2 -0.988 91.7 -93.5-138.6 162.4 84.6 61.3 15.1 7 7 A V - 0 0 23 13,-2.2 13,-0.2 -2,-0.3 15,-0.0 -0.434 55.4 -96.1 -73.1 137.0 84.9 58.7 17.9 8 8 A P - 0 0 84 0, 0.0 -1,-0.1 0, 0.0 12,-0.1 -0.326 41.9-179.2 -54.4 134.3 81.7 58.6 19.9 9 9 A T > + 0 0 41 -3,-0.1 3,-2.2 2,-0.1 4,-0.2 0.472 51.0 101.0-122.6 4.2 81.8 60.8 23.0 10 10 A D G > S+ 0 0 155 1,-0.3 3,-1.9 2,-0.2 -1,-0.0 0.880 76.8 62.2 -71.0 -28.2 78.5 60.3 24.8 11 11 A A G 3 S+ 0 0 45 1,-0.3 -1,-0.3 63,-0.0 54,-0.1 0.589 98.6 58.6 -63.3 -23.9 79.9 57.9 27.3 12 12 A F G < S- 0 0 54 -3,-2.2 -1,-0.3 1,-0.3 -2,-0.2 0.450 86.2-155.7 -81.3 -17.8 82.3 60.6 28.7 13 13 A G < + 0 0 51 -3,-1.9 -1,-0.3 -4,-0.2 2,-0.2 -0.318 69.6 23.3 63.1-150.2 79.7 63.3 29.7 14 14 A K S S- 0 0 207 1,-0.1 2,-0.4 2,-0.0 -4,-0.0 -0.390 85.0-142.8 -50.6 129.8 81.2 66.8 29.8 15 15 A L - 0 0 68 -2,-0.2 -1,-0.1 1,-0.1 -2,-0.1 -0.687 21.5-167.0 -93.6 144.3 84.3 66.8 27.5 16 16 A E S S+ 0 0 184 -2,-0.4 -1,-0.1 2,-0.1 -2,-0.0 0.713 78.2 42.6 -81.0 -37.2 87.5 68.7 28.1 17 17 A R S S- 0 0 133 1,-0.1 3,-0.1 85,-0.0 84,-0.1 -0.906 93.6 -92.6-114.8 152.3 88.7 68.2 24.5 18 18 A P - 0 0 40 0, 0.0 2,-0.1 0, 0.0 84,-0.1 -0.223 62.0 -84.9 -43.6 148.9 87.2 68.4 21.0 19 19 A A - 0 0 31 81,-0.1 82,-0.6 1,-0.1 2,-0.3 -0.366 52.7-102.2 -61.1 146.9 86.0 65.0 19.7 20 20 A A B -B 100 0B 23 80,-0.2 -13,-2.2 -13,-0.2 80,-0.2 -0.486 35.0-115.8 -75.6 127.0 88.8 62.9 18.2 21 21 A V B +A 6 0A 74 78,-2.5 -15,-0.3 -2,-0.3 2,-0.1 -0.365 50.0 153.7 -63.4 131.9 88.8 62.9 14.4 22 22 A F - 0 0 40 -17,-2.4 2,-1.6 -2,-0.1 3,-0.1 -0.486 28.1-172.7-169.0 91.0 88.1 59.4 13.1 23 23 A N > - 0 0 70 1,-0.2 4,-3.8 -18,-0.2 5,-0.3 -0.690 26.6-157.7 -87.3 87.0 86.6 58.7 9.8 24 24 A H H > S+ 0 0 22 -2,-1.6 4,-2.4 1,-0.2 5,-0.2 0.825 78.7 38.0 -43.7 -54.5 86.4 55.0 10.6 25 25 A D H > S+ 0 0 59 -24,-0.5 4,-1.9 -21,-0.2 -1,-0.2 0.915 121.6 43.0 -72.4 -41.4 86.2 53.3 7.2 26 26 A E H > S+ 0 0 94 -3,-0.2 4,-2.9 1,-0.2 5,-0.3 0.934 114.2 53.3 -68.7 -41.0 88.6 55.7 5.4 27 27 A H H X S+ 0 0 57 -4,-3.8 4,-2.0 1,-0.2 -2,-0.2 0.932 110.6 45.4 -49.7 -53.2 91.0 55.6 8.4 28 28 A N H <>S+ 0 0 36 -4,-2.4 5,-2.0 -5,-0.3 4,-0.4 0.866 113.6 49.9 -71.4 -33.3 91.2 51.8 8.5 29 29 A E H ><5S+ 0 0 141 -4,-1.9 3,-1.2 -5,-0.2 -2,-0.2 0.966 112.5 45.7 -71.4 -42.6 91.7 51.6 4.7 30 30 A K H 3<5S+ 0 0 184 -4,-2.9 -2,-0.2 1,-0.3 -1,-0.2 0.807 113.2 51.4 -67.0 -33.2 94.5 54.2 4.6 31 31 A A T 3<5S- 0 0 46 -4,-2.0 -1,-0.3 -5,-0.3 -2,-0.2 0.505 108.3-125.3 -79.2 -19.5 96.2 52.5 7.6 32 32 A G T < 5 + 0 0 52 -3,-1.2 2,-0.6 -4,-0.4 -3,-0.2 0.789 49.6 162.3 84.0 20.9 96.0 49.1 6.0 33 33 A I < + 0 0 53 -5,-2.0 -1,-0.2 -6,-0.2 -2,-0.1 -0.690 10.4 171.7 -81.7 122.3 94.2 47.5 8.9 34 34 A E + 0 0 181 -2,-0.6 2,-0.5 1,-0.1 -1,-0.2 0.859 56.0 70.3-108.8 -18.9 92.7 44.2 7.6 35 35 A S > - 0 0 72 1,-0.1 3,-1.8 2,-0.0 4,-0.2 -0.742 62.9-154.7-101.6 137.2 91.4 42.7 10.8 36 36 A C G >> S+ 0 0 73 -2,-0.5 4,-2.5 1,-0.3 3,-1.7 0.776 93.3 66.2 -75.8 -31.0 88.5 44.2 12.7 37 37 A N G 34 S+ 0 0 37 1,-0.3 -1,-0.3 2,-0.2 5,-0.1 0.511 72.4 89.4 -78.2 8.8 89.8 42.8 16.0 38 38 A A G <4 S+ 0 0 46 -3,-1.8 -1,-0.3 2,-0.1 -2,-0.2 0.834 119.6 3.1 -56.4 -35.5 92.8 45.1 15.9 39 39 A C T <4 S+ 0 0 60 -3,-1.7 2,-2.5 -4,-0.2 -2,-0.2 0.617 129.4 63.0-115.5 -44.3 90.4 47.4 17.7 40 40 A H S < S+ 0 0 52 -4,-2.5 14,-1.6 -5,-0.1 15,-0.3 -0.425 82.8 171.0 -85.5 75.5 87.2 45.4 18.3 41 41 A H - 0 0 51 -2,-2.5 2,-0.5 12,-0.2 12,-0.1 -0.331 35.1-143.1 -93.8 167.5 89.0 42.8 20.4 42 42 A V - 0 0 24 7,-0.4 7,-3.2 10,-0.3 2,-0.5 -0.944 18.9-177.8-129.6 105.7 87.9 39.9 22.6 43 43 A W E +C 48 0C 140 -2,-0.5 2,-0.4 5,-0.2 5,-0.2 -0.932 5.6 176.7-106.6 115.6 89.9 39.4 25.8 44 44 A V E > -C 47 0C 88 3,-2.9 3,-1.7 -2,-0.5 -2,-0.0 -0.989 65.4 -17.7-130.9 120.0 88.8 36.5 27.9 45 45 A N T 3 S- 0 0 162 -2,-0.4 -1,-0.1 1,-0.3 3,-0.1 0.908 127.8 -50.5 58.8 37.4 90.5 35.3 31.1 46 46 A G T 3 S+ 0 0 62 1,-0.2 2,-0.4 0, 0.0 -1,-0.3 0.557 119.0 108.4 88.7 6.3 93.7 37.3 30.3 47 47 A V E < -C 44 0C 98 -3,-1.7 -3,-2.9 0, 0.0 2,-0.5 -0.974 64.2-135.3-126.7 135.2 93.9 35.9 26.8 48 48 A L E -C 43 0C 78 -2,-0.4 2,-0.3 -5,-0.2 -5,-0.2 -0.659 19.2-132.7 -91.7 113.9 93.2 37.7 23.5 49 49 A A - 0 0 29 -7,-3.2 -7,-0.4 -2,-0.5 3,-0.3 -0.531 16.7-164.4 -64.2 122.1 91.2 35.7 21.0 50 50 A E S S+ 0 0 164 -2,-0.3 -1,-0.2 1,-0.2 -13,-0.1 0.653 84.0 41.3 -82.2 -17.8 93.0 36.0 17.7 51 51 A D S S+ 0 0 152 -14,-0.0 2,-0.3 2,-0.0 -1,-0.2 0.117 106.3 67.0-117.3 5.9 90.2 34.8 15.5 52 52 A E - 0 0 118 -3,-0.3 -10,-0.3 -10,-0.1 2,-0.2 -0.968 56.7-166.9-117.6 170.2 87.2 36.6 17.1 53 53 A D - 0 0 71 -2,-0.3 -12,-0.2 -12,-0.1 -16,-0.1 -0.792 27.2-132.9-152.3 165.8 86.1 40.2 17.4 54 54 A S > + 0 0 30 -14,-1.6 3,-2.3 -2,-0.2 -13,-0.2 -0.143 43.0 158.6-109.6 31.4 83.6 42.3 19.3 55 55 A V T 3 + 0 0 76 -15,-0.3 -2,-0.1 1,-0.3 -18,-0.0 -0.335 67.2 36.0 -55.6 129.7 82.2 44.3 16.4 56 56 A G T 3 S+ 0 0 74 1,-0.2 -1,-0.3 0, 0.0 -2,-0.0 0.180 96.9 96.1 104.5 -6.6 78.8 45.6 17.4 57 57 A T S < S- 0 0 57 -3,-2.3 -1,-0.2 3,-0.0 -3,-0.1 -0.930 75.6-127.7-114.5 122.5 79.8 46.2 21.0 58 58 A P > - 0 0 65 0, 0.0 3,-2.2 0, 0.0 4,-0.4 -0.322 17.2-122.9 -56.4 151.3 80.8 49.7 21.9 59 59 A C G >> S+ 0 0 51 1,-0.3 4,-2.3 2,-0.2 3,-2.2 0.898 112.9 62.0 -59.8 -38.3 84.2 50.0 23.7 60 60 A S G 34 S+ 0 0 48 1,-0.3 -1,-0.3 2,-0.2 5,-0.1 0.623 87.7 70.1 -70.3 -12.1 82.3 51.8 26.5 61 61 A D G <4 S+ 0 0 113 -3,-2.2 -1,-0.3 1,-0.1 -2,-0.2 0.673 117.6 20.7 -69.3 -32.8 80.2 48.7 27.2 62 62 A C T <4 S+ 0 0 92 -3,-2.2 2,-0.7 -4,-0.4 -2,-0.2 0.537 116.8 67.7-104.4 -28.5 83.3 47.0 28.6 63 63 A H S < S- 0 0 21 -4,-2.3 -1,-0.2 -5,-0.2 10,-0.1 -0.934 70.4-159.6-101.6 101.4 85.6 49.9 29.5 64 64 A A - 0 0 57 -2,-0.7 10,-2.2 2,-0.4 4,-0.1 -0.407 36.4-101.5 -61.5 177.5 84.1 51.9 32.4 65 65 A L S S+ 0 0 98 8,-0.3 10,-0.4 9,-0.1 2,-0.3 0.872 110.1 56.5 -70.9 -29.4 85.3 55.5 32.9 66 66 A E S S- 0 0 154 7,-0.2 -2,-0.4 1,-0.1 8,-0.1 -0.734 99.6-100.5-102.4 142.7 87.5 54.2 35.7 67 67 A Q - 0 0 125 -2,-0.3 2,-0.4 6,-0.1 3,-0.1 -0.262 31.1-159.6 -50.6 138.0 90.1 51.5 35.4 68 68 A D B > -D 71 0D 119 3,-2.8 3,-2.0 -4,-0.1 2,-0.1 -0.841 58.8 -54.2-126.6 92.2 89.0 48.2 36.7 69 69 A G T 3 S- 0 0 57 -2,-0.4 -1,-0.1 1,-0.3 0, 0.0 -0.576 121.4 -23.2 82.0-126.6 91.9 45.9 37.6 70 70 A D T 3 S+ 0 0 149 -2,-0.1 -1,-0.3 -3,-0.1 -3,-0.0 0.226 114.6 107.8-100.7 8.3 94.0 45.8 34.4 71 71 A T B < S-D 68 0D 53 -3,-2.0 -3,-2.8 1,-0.0 -7,-0.1 -0.843 75.9-125.7 -76.3 115.5 91.0 46.8 32.2 72 72 A P - 0 0 23 0, 0.0 -8,-0.2 0, 0.0 2,-0.1 -0.105 18.5-108.3 -64.2 145.3 91.8 50.4 31.3 73 73 A G > - 0 0 3 -10,-0.1 4,-2.8 -8,-0.1 -8,-0.3 -0.418 45.2 -96.1 -57.7 169.9 89.3 53.1 31.9 74 74 A L H > S+ 0 0 2 -10,-2.2 4,-2.3 1,-0.3 5,-0.2 0.901 121.2 49.5 -67.6 -38.5 87.7 54.4 28.7 75 75 A Q H > S+ 0 0 105 -10,-0.4 4,-2.7 1,-0.2 -1,-0.3 0.948 114.7 45.1 -61.2 -47.0 90.0 57.4 28.0 76 76 A D H > S+ 0 0 68 -11,-0.2 4,-3.6 2,-0.2 5,-0.3 0.895 107.5 59.2 -66.9 -37.1 93.1 55.3 28.5 77 77 A A H X S+ 0 0 16 -4,-2.8 4,-2.5 2,-0.2 5,-0.2 0.924 110.6 42.1 -54.5 -52.9 91.7 52.5 26.4 78 78 A Y H X>S+ 0 0 47 -4,-2.3 4,-3.0 2,-0.2 5,-0.7 0.930 115.7 48.5 -61.3 -46.5 91.4 54.8 23.4 79 79 A H H X>S+ 0 0 59 -4,-2.7 5,-1.5 -5,-0.2 4,-0.9 0.960 114.0 46.9 -60.6 -40.9 94.8 56.5 24.1 80 80 A Q H <5S+ 0 0 121 -4,-3.6 5,-0.2 1,-0.2 4,-0.2 0.935 119.6 39.4 -70.0 -33.8 96.5 53.1 24.4 81 81 A Q H X5S+ 0 0 71 -4,-2.5 4,-1.5 -5,-0.3 -1,-0.2 0.951 126.7 29.6 -73.0 -61.2 94.9 51.7 21.3 82 82 A C H X5S+ 0 0 49 -4,-3.0 4,-2.1 -5,-0.2 5,-0.2 0.968 128.1 36.3 -71.1 -50.6 94.9 54.6 19.0 83 83 A W H XS+ 0 0 27 -4,-2.1 5,-1.7 2,-0.2 4,-0.7 0.921 112.4 44.8 -65.6 -37.5 100.6 55.3 15.7 87 87 A E H ><5S+ 0 0 137 -4,-2.5 3,-0.8 -5,-0.2 -1,-0.2 0.958 112.4 51.3 -70.9 -41.9 103.7 55.3 17.9 88 88 A K H 3<5S+ 0 0 168 -4,-2.7 -2,-0.2 1,-0.3 -1,-0.2 0.892 119.1 36.0 -62.1 -34.2 104.4 51.7 17.1 89 89 A Q H 3<5S- 0 0 79 -4,-2.9 -1,-0.3 2,-0.3 -2,-0.2 0.430 102.9-127.7 -95.4 -9.5 104.2 52.3 13.3 90 90 A A T <<5S+ 0 0 90 -3,-0.8 2,-0.3 -4,-0.7 -3,-0.2 0.840 77.4 101.0 65.2 33.7 105.7 55.7 13.4 91 91 A K < + 0 0 151 -5,-1.7 -2,-0.3 -6,-0.3 -1,-0.2 -0.986 53.6 40.9-140.0 158.6 102.7 57.0 11.5 92 92 A G S S- 0 0 47 -2,-0.3 2,-0.1 -3,-0.1 -2,-0.0 -0.053 95.1 -40.3 93.0 165.2 99.5 58.9 12.4 93 93 A P + 0 0 39 0, 0.0 -7,-0.1 0, 0.0 -6,-0.1 -0.345 44.9 172.7 -65.2 145.4 98.9 61.8 14.9 94 94 A V + 0 0 72 -2,-0.1 2,-0.4 -8,-0.1 3,-0.0 0.452 53.7 85.4-138.6 7.4 100.8 61.8 18.2 95 95 A M S >> S- 0 0 122 1,-0.1 3,-2.4 -12,-0.0 4,-0.8 -0.865 80.5-122.2-101.8 154.5 99.9 65.3 19.5 96 96 A C H >> S+ 0 0 70 -2,-0.4 4,-2.8 1,-0.3 3,-1.4 0.805 112.0 50.9 -57.0 -39.1 96.7 66.1 21.5 97 97 A G H 34 S+ 0 0 44 1,-0.3 5,-0.3 2,-0.2 -1,-0.3 0.519 98.6 64.8 -88.5 -3.2 95.6 68.7 19.0 98 98 A E H <4 S+ 0 0 102 -3,-2.4 -1,-0.3 3,-0.1 -2,-0.2 0.712 118.3 24.5 -89.5 -13.6 96.1 66.5 15.9 99 99 A C H << S+ 0 0 35 -3,-1.4 -78,-2.5 -4,-0.8 2,-1.8 0.748 123.0 52.5-102.8 -44.3 93.3 64.1 17.1 100 100 A H B < S-B 20 0B 40 -4,-2.8 -80,-0.2 -5,-0.3 -1,-0.2 -0.561 90.6-168.0 -89.2 70.3 91.3 66.5 19.3 101 101 A V - 0 0 44 -2,-1.8 2,-0.7 -82,-0.6 -3,-0.1 -0.418 20.0-141.9 -86.1 128.8 91.1 69.0 16.5 102 102 A K 0 0 183 -5,-0.3 -1,-0.1 -2,-0.1 -2,-0.0 -0.897 360.0 360.0 -88.9 105.8 89.9 72.5 17.2 103 103 A N 0 0 191 -2,-0.7 0, 0.0 0, 0.0 0, 0.0 -0.929 360.0 360.0-164.1 360.0 87.8 73.4 14.2