==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GLYCOPROTEIN 17-JAN-06 2CCQ . COMPND 2 MOLECULE: PEPTIDE N-GLYCANASE HOMOLOG; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.D.ALLEN,A.BUCHBERGER,M.BYCROFT . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5800.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 71 71.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 7.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 13 13.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 43 43.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 2 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 11 A G > 0 0 2 0, 0.0 3,-3.1 0, 0.0 7,-0.4 0.000 360.0 360.0 360.0-108.4 43.8 32.3 10.7 2 12 A S T 3 + 0 0 111 1,-0.3 6,-0.1 5,-0.2 92,-0.0 0.639 360.0 76.1 -49.9 -19.2 40.3 30.8 10.7 3 13 A A T 3 S+ 0 0 82 91,-0.1 -1,-0.3 1,-0.1 91,-0.0 0.706 94.2 61.2 -67.1 -17.2 41.4 28.3 13.4 4 14 A S S <> S- 0 0 2 -3,-3.1 4,-2.8 1,-0.1 5,-0.2 -0.947 75.7-149.2-114.5 125.1 41.1 31.4 15.7 5 15 A P H > S+ 0 0 92 0, 0.0 4,-1.7 0, 0.0 -1,-0.1 0.913 101.3 46.8 -56.3 -45.3 37.7 33.1 16.2 6 16 A A H > S+ 0 0 3 2,-0.2 4,-2.5 1,-0.2 58,-0.2 0.896 112.8 48.5 -65.9 -40.9 39.4 36.5 16.8 7 17 A V H > S+ 0 0 0 -6,-0.3 4,-2.4 2,-0.2 -1,-0.2 0.905 107.9 55.6 -66.1 -38.3 41.7 36.1 13.8 8 18 A A H < S+ 0 0 33 -4,-2.8 4,-0.3 -7,-0.4 -1,-0.2 0.886 110.6 45.8 -59.6 -38.0 38.7 35.1 11.7 9 19 A E H >< S+ 0 0 79 -4,-1.7 3,-1.6 1,-0.2 -1,-0.2 0.900 109.5 53.5 -69.9 -42.5 37.1 38.4 12.7 10 20 A L H 3< S+ 0 0 0 -4,-2.5 -2,-0.2 50,-0.3 -1,-0.2 0.856 100.2 63.2 -60.5 -34.0 40.3 40.3 12.0 11 21 A C T 3< S+ 0 0 47 -4,-2.4 2,-1.3 1,-0.3 -1,-0.3 0.663 82.7 80.9 -65.2 -16.2 40.2 38.7 8.5 12 22 A Q S < S+ 0 0 122 -3,-1.6 2,-0.3 -4,-0.3 -1,-0.3 -0.323 80.1 89.3 -87.2 52.0 37.0 40.6 7.9 13 23 A N S S- 0 0 45 -2,-1.3 45,-0.0 -3,-0.1 -3,-0.0 -0.936 88.2 -91.5-140.1 159.9 38.9 43.8 7.1 14 24 A T > - 0 0 85 -2,-0.3 4,-2.4 1,-0.1 5,-0.2 -0.363 47.8-102.0 -70.2 157.7 40.4 45.2 3.9 15 25 A P H > S+ 0 0 91 0, 0.0 4,-2.9 0, 0.0 5,-0.2 0.864 117.3 49.0 -46.9 -53.4 44.0 44.2 3.2 16 26 A E H > S+ 0 0 137 1,-0.2 4,-2.3 2,-0.2 5,-0.2 0.910 114.7 45.2 -59.7 -43.8 45.8 47.4 4.3 17 27 A T H > S+ 0 0 46 2,-0.2 4,-2.6 1,-0.2 5,-0.3 0.887 113.1 50.8 -67.6 -39.6 43.9 47.5 7.6 18 28 A F H X S+ 0 0 16 -4,-2.4 4,-2.8 1,-0.2 5,-0.2 0.939 112.5 46.3 -63.0 -46.7 44.6 43.9 8.2 19 29 A L H X S+ 0 0 66 -4,-2.9 4,-2.0 -5,-0.2 -2,-0.2 0.893 113.7 48.8 -63.6 -39.9 48.3 44.2 7.5 20 30 A E H X S+ 0 0 97 -4,-2.3 4,-1.6 -5,-0.2 -2,-0.2 0.934 116.4 40.9 -66.2 -47.7 48.5 47.3 9.7 21 31 A A H X S+ 0 0 0 -4,-2.6 4,-2.5 1,-0.2 -2,-0.2 0.923 115.5 50.6 -67.7 -44.5 46.7 45.8 12.7 22 32 A S H X S+ 0 0 0 -4,-2.8 4,-2.7 -5,-0.3 5,-0.2 0.881 106.2 55.7 -63.3 -37.0 48.4 42.4 12.3 23 33 A K H X S+ 0 0 130 -4,-2.0 4,-1.9 -5,-0.2 -1,-0.2 0.938 111.1 44.2 -60.6 -45.5 51.9 44.0 12.2 24 34 A L H X S+ 0 0 14 -4,-1.6 4,-2.4 2,-0.2 -2,-0.2 0.906 111.8 53.3 -65.7 -41.7 51.2 45.8 15.5 25 35 A L H X S+ 0 0 0 -4,-2.5 4,-2.1 1,-0.2 -2,-0.2 0.916 109.6 48.3 -60.0 -43.0 49.7 42.6 17.0 26 36 A L H X S+ 0 0 18 -4,-2.7 4,-3.0 1,-0.2 -1,-0.2 0.876 109.2 54.1 -65.3 -36.2 52.8 40.6 16.1 27 37 A T H X S+ 0 0 58 -4,-1.9 4,-2.1 -5,-0.2 -2,-0.2 0.934 108.4 48.1 -63.7 -45.0 55.1 43.3 17.5 28 38 A Y H X S+ 0 0 30 -4,-2.4 4,-1.3 2,-0.2 -2,-0.2 0.925 115.5 44.5 -61.3 -44.3 53.3 43.2 20.9 29 39 A A H X S+ 0 0 0 -4,-2.1 4,-2.4 1,-0.2 3,-0.3 0.949 113.2 50.8 -65.5 -47.7 53.5 39.4 21.0 30 40 A D H X S+ 0 0 38 -4,-3.0 4,-2.0 1,-0.2 -1,-0.2 0.820 104.0 58.0 -60.9 -33.8 57.1 39.3 19.9 31 41 A N H X S+ 0 0 40 -4,-2.1 4,-1.8 2,-0.2 -1,-0.2 0.922 111.1 42.1 -63.9 -42.1 58.2 41.9 22.5 32 42 A I H < S+ 0 0 0 -4,-1.3 -2,-0.2 -3,-0.3 -1,-0.2 0.910 114.2 51.1 -69.7 -42.7 57.0 39.6 25.3 33 43 A L H < S+ 0 0 49 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.803 110.9 49.7 -65.2 -28.7 58.3 36.5 23.7 34 44 A R H < S+ 0 0 149 -4,-2.0 -1,-0.2 1,-0.3 -2,-0.2 0.870 132.8 12.7 -76.8 -38.4 61.7 38.2 23.3 35 45 A N >< + 0 0 69 -4,-1.8 3,-1.4 -5,-0.2 -1,-0.3 -0.675 67.0 172.5-140.8 81.5 61.8 39.3 27.0 36 46 A P T 3 S+ 0 0 48 0, 0.0 -3,-0.1 0, 0.0 -4,-0.1 0.534 78.0 58.8 -68.2 -6.1 59.1 37.6 29.0 37 47 A N T 3 S+ 0 0 160 -5,-0.1 2,-0.7 1,-0.0 -5,-0.1 0.295 81.1 94.8-107.4 9.4 60.4 39.0 32.3 38 48 A D X - 0 0 57 -3,-1.4 3,-1.1 -6,-0.2 4,-0.4 -0.895 58.5-159.3-104.8 112.2 60.1 42.7 31.4 39 49 A E G > S+ 0 0 159 -2,-0.7 3,-1.1 1,-0.2 40,-0.2 0.737 84.1 75.1 -62.2 -22.9 56.9 44.2 32.7 40 50 A K G > S+ 0 0 124 1,-0.3 3,-0.9 2,-0.2 -1,-0.2 0.888 96.9 46.9 -56.3 -40.9 57.1 47.1 30.2 41 51 A Y G < S+ 0 0 64 -3,-1.1 -1,-0.3 1,-0.2 -9,-0.2 0.586 102.5 66.4 -78.6 -10.4 56.1 44.7 27.3 42 52 A R G < S+ 0 0 27 -3,-1.1 37,-2.7 -4,-0.4 2,-0.4 0.288 94.8 63.6 -95.2 9.7 53.2 43.3 29.4 43 53 A S E < -A 78 0A 51 -3,-0.9 2,-0.5 35,-0.2 35,-0.2 -0.996 56.6-173.3-137.2 131.1 51.2 46.6 29.5 44 54 A I E -A 77 0A 9 33,-2.4 33,-2.5 -2,-0.4 2,-0.4 -0.983 24.4-133.5-123.6 118.2 49.7 48.5 26.6 45 55 A R E > -A 76 0A 128 -2,-0.5 3,-1.8 31,-0.2 31,-0.3 -0.571 8.6-142.6 -73.5 128.3 48.1 51.8 27.3 46 56 A I T 3 S+ 0 0 37 29,-2.6 -1,-0.2 -2,-0.4 30,-0.1 0.832 102.0 54.7 -59.6 -31.8 44.7 52.1 25.7 47 57 A G T 3 S+ 0 0 46 28,-0.5 -1,-0.3 4,-0.1 29,-0.1 0.459 80.1 127.0 -81.8 -0.7 45.4 55.8 24.9 48 58 A N <> - 0 0 52 -3,-1.8 4,-2.9 1,-0.1 5,-0.3 -0.283 68.0-124.2 -57.4 140.1 48.6 54.9 23.2 49 59 A T H > S+ 0 0 109 1,-0.2 4,-1.8 2,-0.2 5,-0.3 0.925 107.7 42.5 -53.3 -52.8 48.8 56.4 19.6 50 60 A A H > S+ 0 0 12 2,-0.2 4,-2.3 1,-0.2 5,-0.4 0.941 117.7 45.4 -62.8 -48.9 49.4 53.1 17.8 51 61 A F H >>S+ 0 0 3 -6,-0.2 5,-2.5 1,-0.2 4,-1.8 0.936 115.2 46.3 -60.9 -48.1 46.9 51.1 19.8 52 62 A S H <5S+ 0 0 41 -4,-2.9 -1,-0.2 1,-0.2 -2,-0.2 0.787 121.8 35.2 -68.1 -29.8 44.1 53.7 19.6 53 63 A T H <5S+ 0 0 92 -4,-1.8 -1,-0.2 -5,-0.3 -2,-0.2 0.712 127.8 31.3 -98.5 -22.4 44.5 54.4 15.9 54 64 A R H <5S+ 0 0 92 -4,-2.3 -3,-0.2 -5,-0.3 -2,-0.2 0.634 131.6 17.4-111.0 -17.7 45.4 50.9 14.5 55 65 A L T ><5S+ 0 0 0 -4,-1.8 3,-2.0 -5,-0.4 7,-0.5 0.738 109.2 64.0-120.0 -50.1 43.7 48.4 16.8 56 66 A L T 3 S- 0 0 16 -3,-2.0 3,-1.5 -41,-0.0 4,-0.6 -0.853 80.2-115.8-104.8 124.4 39.5 47.6 13.9 59 69 A R T 34 S+ 0 0 124 -2,-0.5 -47,-0.1 1,-0.2 -3,-0.0 -0.275 97.5 4.3 -54.5 128.3 37.1 44.6 14.0 60 70 A G T 3> S+ 0 0 1 -49,-0.1 4,-1.3 -50,-0.1 -50,-0.3 0.133 100.9 106.1 84.0 -19.3 38.8 41.6 15.6 61 71 A A H X> S+ 0 0 0 -3,-1.5 4,-1.0 -6,-0.3 3,-0.7 0.954 83.9 36.3 -58.9 -59.6 42.1 43.4 16.5 62 72 A V H 3X S+ 0 0 16 -4,-0.6 4,-1.8 -7,-0.5 3,-0.5 0.878 111.6 63.0 -64.7 -34.8 41.7 43.8 20.3 63 73 A E H 3> S+ 0 0 92 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.825 97.8 57.4 -58.4 -31.3 40.0 40.4 20.4 64 74 A C H S+ 0 0 0 -4,-1.0 5,-2.5 -3,-0.5 4,-1.2 0.882 108.8 51.0 -64.7 -37.3 45.1 40.4 22.2 66 76 A F H <5S+ 0 0 78 -4,-1.8 3,-0.5 1,-0.2 -2,-0.2 0.922 108.9 50.2 -67.0 -41.4 42.5 38.8 24.5 67 77 A E H <5S+ 0 0 51 -4,-2.2 -1,-0.2 1,-0.2 -2,-0.2 0.841 106.3 57.1 -64.5 -30.9 43.0 35.4 22.8 68 78 A M H <5S- 0 0 1 -4,-1.8 -1,-0.2 -5,-0.1 -2,-0.2 0.814 131.4 -92.4 -67.7 -30.6 46.8 35.9 23.3 69 79 A G T <5S+ 0 0 21 -4,-1.2 -3,-0.2 -3,-0.5 -2,-0.1 0.328 79.0 137.8 134.5 -5.6 46.2 36.3 27.0 70 80 A F < - 0 0 4 -5,-2.5 2,-0.4 9,-0.2 -1,-0.3 -0.383 36.3-153.8 -69.6 149.9 45.8 40.1 27.5 71 81 A E E -B 78 0A 111 7,-2.4 7,-3.2 -2,-0.1 2,-0.4 -0.976 16.8-118.4-126.0 140.0 43.2 41.3 29.9 72 82 A E E +B 77 0A 127 -2,-0.4 5,-0.2 5,-0.2 2,-0.2 -0.643 33.5 175.3 -85.4 129.0 41.5 44.7 29.7 73 83 A G - 0 0 33 3,-2.7 -27,-0.0 -2,-0.4 -1,-0.0 -0.437 49.5 -83.0-113.0-170.3 41.8 47.2 32.6 74 84 A E S S+ 0 0 198 -2,-0.2 3,-0.1 1,-0.1 -2,-0.0 0.861 122.3 2.2 -65.7 -36.8 40.7 50.8 33.0 75 85 A T S S+ 0 0 85 1,-0.2 -29,-2.6 -29,-0.1 -28,-0.5 0.516 128.8 40.4-127.8 -12.7 43.6 52.3 31.2 76 86 A H E -A 45 0A 59 -31,-0.3 -3,-2.7 -30,-0.1 2,-0.5 -0.952 65.0-128.0-139.5 158.4 45.8 49.4 30.0 77 87 A L E -AB 44 72A 0 -33,-2.5 -33,-2.4 -2,-0.3 2,-0.4 -0.914 39.3-157.7-100.3 130.2 45.6 45.9 28.5 78 88 A I E -AB 43 71A 72 -7,-3.2 -7,-2.4 -2,-0.5 -35,-0.2 -0.940 20.8-151.7-120.0 135.6 47.7 43.7 30.7 79 89 A F - 0 0 2 -37,-2.7 -9,-0.2 -2,-0.4 -13,-0.0 -0.883 34.1-133.0-102.4 102.0 49.4 40.4 30.0 80 90 A P > - 0 0 23 0, 0.0 3,-0.9 0, 0.0 -37,-0.0 -0.080 12.2-120.5 -52.9 151.6 49.5 38.7 33.5 81 91 A K T 3 S+ 0 0 195 1,-0.2 -2,-0.0 -44,-0.0 -42,-0.0 0.800 116.4 53.6 -64.4 -26.9 52.6 37.1 34.7 82 92 A K T 3 S+ 0 0 178 2,-0.1 -1,-0.2 3,-0.0 3,-0.1 0.645 82.7 116.7 -81.2 -17.5 50.7 33.8 34.9 83 93 A A S < S- 0 0 19 -3,-0.9 2,-0.3 1,-0.1 -14,-0.1 -0.237 75.0-105.5 -57.2 138.6 49.5 34.0 31.3 84 94 A S > - 0 0 51 1,-0.2 4,-1.6 2,-0.0 -1,-0.1 -0.490 19.9-160.8 -70.2 123.1 50.7 31.2 29.1 85 95 A V H > S+ 0 0 56 -2,-0.3 4,-2.3 1,-0.2 5,-0.2 0.795 94.3 60.5 -72.7 -26.4 53.5 32.1 26.6 86 96 A E H > S+ 0 0 139 2,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.920 105.0 47.4 -64.9 -42.6 52.6 29.0 24.6 87 97 A Q H > S+ 0 0 67 2,-0.2 4,-2.0 1,-0.2 5,-0.2 0.887 109.8 54.1 -64.3 -38.9 49.1 30.5 24.1 88 98 A L H X S+ 0 0 0 -4,-1.6 4,-2.0 1,-0.2 -2,-0.2 0.925 110.5 45.9 -59.6 -46.0 50.6 33.8 23.1 89 99 A Q H X S+ 0 0 79 -4,-2.3 4,-2.4 2,-0.2 -1,-0.2 0.855 107.8 58.5 -66.4 -36.6 52.8 32.1 20.5 90 100 A K H X S+ 0 0 122 -4,-2.1 4,-1.9 1,-0.2 -2,-0.2 0.938 111.4 39.3 -59.5 -49.1 49.8 30.1 19.2 91 101 A I H X S+ 0 0 2 -4,-2.0 4,-1.6 2,-0.2 -1,-0.2 0.868 111.3 59.6 -70.2 -35.4 47.8 33.2 18.4 92 102 A R H X S+ 0 0 56 -4,-2.0 4,-2.4 -5,-0.2 3,-0.3 0.935 108.6 44.8 -57.2 -47.0 50.9 35.0 17.1 93 103 A D H X S+ 0 0 76 -4,-2.4 4,-2.2 1,-0.2 -1,-0.2 0.891 108.5 55.8 -65.4 -41.5 51.3 32.2 14.5 94 104 A L H < S+ 0 0 27 -4,-1.9 -1,-0.2 1,-0.2 -2,-0.2 0.781 112.0 44.4 -63.9 -26.6 47.7 32.1 13.5 95 105 A I H >< S+ 0 0 0 -4,-1.6 3,-1.8 -3,-0.3 4,-0.4 0.923 110.6 54.1 -79.5 -48.7 47.9 35.9 12.7 96 106 A A H >< S+ 0 0 31 -4,-2.4 3,-1.4 1,-0.3 -2,-0.2 0.850 100.6 58.3 -54.8 -41.7 51.2 35.6 10.9 97 107 A I T 3< S+ 0 0 114 -4,-2.2 -1,-0.3 1,-0.3 -2,-0.1 0.605 102.0 57.7 -69.0 -8.5 50.1 32.9 8.4 98 108 A E T < 0 0 76 -3,-1.8 -1,-0.3 -5,-0.2 -2,-0.2 0.493 360.0 360.0 -99.3 -4.5 47.2 35.2 7.2 99 109 A R < 0 0 141 -3,-1.4 -80,-0.0 -4,-0.4 -3,-0.0 -0.272 360.0 360.0 -77.4 360.0 49.4 38.2 6.2