==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 04-MAR-99 1CDZ . COMPND 2 MOLECULE: PROTEIN (DNA-REPAIR PROTEIN XRCC1); . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR X.ZHANG,S.MORERA,P.BATES,P.WHITEHEAD,A.COFFER,K.HAINBUCHER, . 96 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6005.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 68 70.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 11 11.5 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 10.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 18 18.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 21 21.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A E 0 0 210 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-146.6 42.9 -0.5 2.0 2 2 A L - 0 0 105 2,-0.0 2,-0.1 1,-0.0 30,-0.0 -0.769 360.0-137.0 -91.7 117.7 45.3 -1.8 4.5 3 3 A P - 0 0 29 0, 0.0 3,-0.2 0, 0.0 80,-0.1 -0.406 13.3-153.1 -66.7 139.5 47.1 -5.1 3.9 4 4 A D > + 0 0 83 1,-0.1 3,-1.8 -2,-0.1 28,-0.1 -0.170 41.9 138.2-118.2 52.0 47.2 -7.2 7.0 5 5 A F T 3 + 0 0 24 1,-0.3 3,-0.2 2,-0.1 -1,-0.1 0.666 69.2 62.5 -67.5 -19.9 50.2 -9.5 6.7 6 6 A F T > S+ 0 0 0 26,-1.6 3,-2.9 1,-0.2 29,-0.3 0.345 75.0 153.2 -87.1 11.9 51.3 -9.1 10.3 7 7 A Q T < S- 0 0 99 -3,-1.8 -1,-0.2 25,-0.3 -2,-0.1 0.477 73.7 -5.4 -0.3 -83.5 48.0 -10.7 11.1 8 8 A G T 3 S+ 0 0 43 -3,-0.2 2,-0.5 26,-0.1 -1,-0.3 -0.001 99.4 125.4-123.1 34.9 48.6 -12.4 14.5 9 9 A K < - 0 0 59 -3,-2.9 26,-2.6 24,-0.2 2,-0.4 -0.783 48.5-143.9 -99.5 128.5 52.3 -11.8 14.9 10 10 A H E -a 35 0A 36 33,-0.5 35,-2.1 -2,-0.5 36,-1.9 -0.744 16.1-163.2 -93.7 137.6 53.6 -10.1 18.0 11 11 A F E -ab 36 46A 0 24,-2.3 26,-3.1 -2,-0.4 2,-0.4 -0.751 12.4-166.2-119.2 163.3 56.5 -7.8 18.0 12 12 A F E - b 0 47A 28 34,-1.2 36,-4.8 -2,-0.3 2,-0.8 -0.959 16.3-144.6-148.1 125.2 58.9 -6.3 20.4 13 13 A L E + b 0 48A 12 24,-0.5 36,-0.2 -2,-0.4 4,-0.1 -0.867 26.0 173.5 -92.5 114.8 61.2 -3.5 19.8 14 14 A Y + 0 0 69 34,-4.1 35,-0.2 -2,-0.8 -1,-0.2 0.898 42.3 76.7 -89.2 -51.3 64.3 -4.3 21.7 15 15 A G S S- 0 0 11 33,-0.7 2,-0.6 1,-0.1 -2,-0.1 0.624 88.3 -94.9 -45.1-165.0 66.8 -1.8 20.9 16 16 A E - 0 0 164 2,-0.0 34,-0.2 6,-0.0 -1,-0.1 -0.972 57.4-160.0-113.5 116.4 67.6 1.8 21.7 17 17 A F - 0 0 25 -2,-0.6 2,-3.4 -3,-0.1 -4,-0.0 -0.952 28.7-106.0-117.5 150.2 65.9 3.3 18.8 18 18 A P > - 0 0 81 0, 0.0 2,-1.4 0, 0.0 3,-0.5 -0.182 53.4-116.5 -60.1 46.8 66.2 6.8 17.1 19 19 A G T 3> S+ 0 0 49 -2,-3.4 4,-1.6 1,-0.3 3,-0.4 -0.259 110.9 49.1 52.5 -84.5 62.9 8.0 18.6 20 20 A D H 3> S+ 0 0 121 -2,-1.4 4,-2.3 1,-0.2 -1,-0.3 0.662 104.7 64.0 -58.9 -13.9 61.0 8.6 15.3 21 21 A E H <> S+ 0 0 40 -3,-0.5 4,-3.0 2,-0.2 -1,-0.2 0.977 97.9 51.6 -73.5 -52.0 62.1 5.1 14.3 22 22 A R H > S+ 0 0 104 -3,-0.4 4,-2.9 1,-0.2 5,-0.3 0.935 110.8 51.3 -44.9 -49.4 60.2 3.5 17.1 23 23 A R H X S+ 0 0 195 -4,-1.6 4,-4.1 1,-0.2 -1,-0.2 0.934 108.9 49.2 -52.5 -55.2 57.2 5.5 15.8 24 24 A K H X S+ 0 0 95 -4,-2.3 4,-3.7 2,-0.2 5,-0.3 0.921 112.8 48.6 -50.8 -49.9 57.7 4.3 12.3 25 25 A L H X S+ 0 0 0 -4,-3.0 4,-3.8 1,-0.2 -2,-0.2 0.976 114.6 42.5 -54.9 -66.2 57.9 0.7 13.5 26 26 A I H X>S+ 0 0 62 -4,-2.9 4,-1.6 2,-0.2 5,-0.6 0.837 115.6 51.6 -49.1 -42.3 54.9 0.9 15.6 27 27 A R H X5S+ 0 0 164 -4,-4.1 4,-3.4 -5,-0.3 5,-0.2 0.991 116.2 40.1 -57.0 -65.2 53.2 2.8 12.8 28 28 A Y H X5S+ 0 0 41 -4,-3.7 4,-1.7 2,-0.2 -2,-0.2 0.788 116.6 49.2 -51.4 -42.1 54.1 0.2 10.3 29 29 A V H ><>S+ 0 0 0 -4,-3.8 5,-2.1 -5,-0.3 3,-1.7 0.994 117.8 36.1 -64.0 -70.3 53.5 -2.8 12.5 30 30 A T H ><5S+ 0 0 75 -4,-1.6 3,-2.8 1,-0.3 -2,-0.2 0.885 112.7 63.5 -51.3 -39.0 50.1 -1.9 13.9 31 31 A A H 3< S- 0 0 23 -2,-0.3 3,-2.9 23,-0.0 -2,-0.1 -0.951 70.2 -79.6-159.8 163.2 57.1 -12.6 27.0 42 42 A D T 3 S+ 0 0 120 1,-0.3 -2,-0.1 -2,-0.3 21,-0.0 0.663 118.3 72.0 -44.6 -24.6 55.9 -15.8 25.4 43 43 A R T 3 S+ 0 0 122 -34,-0.0 -33,-0.5 2,-0.0 -1,-0.3 0.839 78.3 103.3 -65.9 -26.1 53.5 -13.8 23.1 44 44 A V < + 0 0 0 -3,-2.9 -33,-0.2 -5,-0.2 3,-0.1 -0.215 33.8 163.5 -65.4 135.6 56.5 -12.5 21.1 45 45 A Q S S+ 0 0 63 -35,-2.1 23,-0.7 1,-0.4 2,-0.4 0.577 71.2 34.9-121.7 -24.3 57.4 -13.9 17.8 46 46 A F E -bc 11 68A 21 -36,-1.9 -34,-1.2 21,-0.2 2,-0.6 -0.978 59.8-161.1-138.8 127.2 59.6 -11.2 16.5 47 47 A V E -bc 12 69A 0 21,-3.0 23,-1.8 -2,-0.4 2,-0.6 -0.914 17.1-151.3-102.6 117.8 62.0 -9.1 18.4 48 48 A I E +bc 13 70A 0 -36,-4.8 -34,-4.1 -2,-0.6 -33,-0.7 -0.818 24.6 166.9 -93.4 126.8 62.8 -6.0 16.4 49 49 A T - 0 0 0 21,-2.5 4,-0.1 -2,-0.6 -32,-0.1 -0.996 36.1-178.2-146.5 135.9 66.2 -4.7 17.1 50 50 A A S S+ 0 0 39 -2,-0.4 -1,-0.1 21,-0.2 21,-0.1 0.646 78.5 78.8 -91.4 -29.9 68.5 -2.2 15.5 51 51 A Q S S- 0 0 67 1,-0.1 2,-0.2 -3,-0.1 -2,-0.1 0.148 90.6 -88.9 -63.9-170.4 71.0 -3.0 18.1 52 52 A E - 0 0 109 1,-0.2 -1,-0.1 40,-0.0 -2,-0.1 -0.617 56.3 -59.5-108.1 165.0 73.2 -6.1 18.2 53 53 A W - 0 0 51 40,-0.4 -1,-0.2 -2,-0.2 42,-0.1 -0.014 56.3-158.6 -41.6 131.7 72.9 -9.6 19.5 54 54 A D >> - 0 0 40 1,-0.1 3,-2.3 -3,-0.1 4,-0.7 -0.961 29.1-128.6-125.4 137.2 72.3 -9.6 23.3 55 55 A P H 3> S+ 0 0 81 0, 0.0 4,-1.4 0, 0.0 5,-0.2 0.815 110.1 70.8 -44.2 -32.3 72.9 -12.4 25.9 56 56 A S H 3> S+ 0 0 34 1,-0.2 4,-2.4 2,-0.2 5,-0.3 0.879 89.1 60.1 -52.4 -45.2 69.3 -11.6 26.8 57 57 A F H <> S+ 0 0 3 -3,-2.3 4,-3.5 1,-0.2 -1,-0.2 0.943 100.6 53.8 -50.1 -55.4 68.2 -13.1 23.5 58 58 A E H X S+ 0 0 104 -4,-0.7 4,-3.7 1,-0.3 -1,-0.2 0.904 111.2 42.6 -47.1 -60.1 69.6 -16.5 24.4 59 59 A E H < S+ 0 0 113 -4,-1.4 -1,-0.3 1,-0.3 -2,-0.2 0.871 117.3 48.7 -60.1 -32.4 67.8 -16.8 27.8 60 60 A A H >X S+ 0 0 23 -4,-2.4 4,-0.7 -5,-0.2 3,-0.6 0.890 113.2 49.2 -70.5 -36.9 64.7 -15.5 26.1 61 61 A L H >< S+ 0 0 47 -4,-3.5 2,-1.8 -5,-0.3 3,-1.2 0.927 103.4 57.5 -67.0 -48.2 65.4 -18.0 23.4 62 62 A M T 3< S+ 0 0 142 -4,-3.7 -1,-0.3 1,-0.3 -2,-0.1 -0.189 114.6 40.1 -83.9 52.2 65.9 -20.9 25.8 63 63 A D T <4 S+ 0 0 114 -2,-1.8 -1,-0.3 -3,-0.6 -2,-0.2 0.209 131.8 21.7-165.4 -23.7 62.5 -20.3 27.1 64 64 A N X< + 0 0 25 -3,-1.2 3,-1.2 -4,-0.7 -2,-0.1 -0.527 64.9 179.9-160.6 82.8 60.7 -19.5 23.9 65 65 A P T 3 + 0 0 107 0, 0.0 -4,-0.1 0, 0.0 -3,-0.1 0.666 69.1 78.9 -57.7 -30.4 62.5 -20.9 20.8 66 66 A S T 3 S+ 0 0 81 -5,-0.1 -5,-0.1 -22,-0.1 -21,-0.0 0.669 70.3 130.2 -57.6 -19.3 60.1 -19.6 18.1 67 67 A L < - 0 0 18 -3,-1.2 2,-0.3 -6,-0.1 -21,-0.2 0.065 43.1-159.5 -41.8 140.0 61.7 -16.2 18.4 68 68 A A E -c 46 0A 9 -23,-0.7 -21,-3.0 2,-0.0 2,-0.5 -0.886 4.6-156.8-120.2 146.5 62.8 -14.1 15.4 69 69 A F E +c 47 0A 17 -2,-0.3 23,-1.9 -23,-0.2 2,-0.3 -0.870 27.3 168.4-127.9 96.1 65.3 -11.4 15.8 70 70 A V E -cD 48 91A 0 -23,-1.8 -21,-2.5 -2,-0.5 21,-0.2 -0.736 31.8-125.5-110.6 152.9 64.8 -9.1 12.9 71 71 A R > - 0 0 66 19,-2.1 3,-2.9 -2,-0.3 4,-0.3 -0.830 32.9-107.0 -98.8 142.8 66.1 -5.7 12.2 72 72 A P T >> S+ 0 0 10 0, 0.0 4,-1.6 0, 0.0 3,-0.5 0.767 109.8 79.9 -29.6 -44.9 63.8 -2.9 11.4 73 73 A R H 3> S+ 0 0 164 1,-0.3 4,-1.8 2,-0.2 5,-0.3 0.789 89.8 57.8 -41.4 -30.8 64.8 -2.9 7.8 74 74 A W H <> S+ 0 0 1 -3,-2.9 4,-2.8 1,-0.2 -1,-0.3 0.979 102.6 49.3 -62.7 -63.0 62.5 -5.8 7.5 75 75 A I H <> S+ 0 0 0 -3,-0.5 4,-1.4 -4,-0.3 -1,-0.2 0.790 115.7 46.7 -49.0 -33.8 59.4 -4.0 8.7 76 76 A Y H >X S+ 0 0 27 -4,-1.6 4,-2.3 2,-0.2 3,-1.7 0.970 113.3 42.8 -70.3 -79.6 60.2 -1.2 6.2 77 77 A S H 3< S+ 0 0 10 -4,-1.8 4,-0.3 1,-0.3 -2,-0.2 0.713 109.3 63.4 -36.9 -31.9 60.9 -3.2 3.1 78 78 A C H >X>S+ 0 0 0 -4,-2.8 5,-1.9 -5,-0.3 3,-1.1 0.985 113.6 31.4 -58.6 -57.1 57.9 -5.3 4.0 79 79 A N H X<5S+ 0 0 34 -3,-1.7 3,-1.4 -4,-1.4 -2,-0.2 0.946 110.2 67.7 -63.3 -49.0 55.7 -2.2 3.6 80 80 A E T 3<5S+ 0 0 130 -4,-2.3 -1,-0.3 1,-0.3 -2,-0.2 0.498 117.2 26.8 -52.3 -2.0 58.0 -0.9 0.9 81 81 A K T <45S- 0 0 130 -3,-1.1 -1,-0.3 -5,-0.3 -2,-0.2 0.355 104.5-124.0-135.7 -15.6 56.7 -3.9 -1.2 82 82 A Q T <<5S+ 0 0 101 -3,-1.4 2,-0.3 -4,-0.8 -3,-0.2 0.990 76.7 103.0 59.0 56.9 53.3 -4.4 0.4 83 83 A K S - 0 0 59 0, 0.0 3,-1.4 0, 0.0 4,-0.5 -0.439 26.8-145.4 -63.8 119.8 61.0 -13.5 5.1 87 87 A H G > S+ 0 0 51 -2,-0.3 3,-1.6 1,-0.3 -16,-0.2 0.767 89.7 83.3 -58.5 -23.4 62.5 -12.0 8.2 88 88 A Q G > S+ 0 0 131 1,-0.3 3,-1.4 2,-0.2 -1,-0.3 0.887 83.2 56.6 -48.1 -40.7 65.4 -14.3 7.5 89 89 A L G < S+ 0 0 121 -3,-1.4 -1,-0.3 1,-0.3 -2,-0.2 0.822 113.7 42.2 -62.9 -24.7 66.9 -11.8 5.0 90 90 A Y G < S+ 0 0 50 -3,-1.6 -19,-2.1 -4,-0.5 -1,-0.3 -0.273 92.6 149.9-115.4 47.3 66.8 -9.2 7.8 91 91 A G B < -D 70 0A 36 -3,-1.4 2,-0.5 -21,-0.2 -21,-0.2 -0.327 41.4-145.3 -89.0 167.6 68.1 -11.4 10.6 92 92 A V + 0 0 8 -23,-1.9 -23,-0.1 -2,-0.1 -2,-0.1 -0.966 25.8 168.1-128.8 111.3 70.1 -10.8 13.7 93 93 A V - 0 0 101 -2,-0.5 -40,-0.4 -40,-0.1 2,-0.0 -0.887 46.1-101.4-120.6 150.7 72.5 -13.6 14.8 94 94 A P - 0 0 56 0, 0.0 2,-1.0 0, 0.0 -40,-0.0 -0.525 44.1-119.6 -67.4 139.9 75.1 -13.4 17.4 95 95 A Q 0 0 191 -42,-0.1 -3,-0.0 -2,-0.0 0, 0.0 -0.858 360.0 360.0 -86.9 108.3 78.2 -13.0 15.3 96 96 A A 0 0 141 -2,-1.0 -3,-0.0 0, 0.0 0, 0.0 -0.956 360.0 360.0 172.1 360.0 80.2 -16.1 16.3