==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT (HEME PROTEIN) 06-MAR-96 1CED . COMPND 2 MOLECULE: CYTOCHROME C6; . SOURCE 2 ORGANISM_SCIENTIFIC: MONORAPHIDIUM BRAUNII; . AUTHOR L.BANCI,I.BERTINI,G.QUACQUARINI,O.WALTER,A.DIAZ,M.HERVAS, . 89 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4843.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 63 70.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 10.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 41 46.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A E 0 0 191 0, 0.0 71,-0.0 0, 0.0 70,-0.0 0.000 360.0 360.0 360.0 15.4 4.4 -16.1 -4.1 2 2 A A - 0 0 35 1,-0.1 70,-0.1 2,-0.0 69,-0.0 0.896 360.0-170.6 45.1 47.5 3.0 -12.7 -3.0 3 3 A D > - 0 0 72 1,-0.1 4,-2.4 75,-0.1 76,-0.3 -0.301 31.5-138.4 -72.8 151.8 5.2 -13.1 0.1 4 4 A L H > S+ 0 0 69 2,-0.2 4,-2.6 3,-0.2 -1,-0.1 0.811 105.7 49.3 -77.5 -36.3 5.0 -10.7 3.1 5 5 A A H > S+ 0 0 66 2,-0.2 4,-3.1 3,-0.2 5,-0.2 0.938 114.2 45.8 -72.1 -44.3 8.8 -10.6 3.6 6 6 A L H > S+ 0 0 59 2,-0.2 4,-2.8 1,-0.2 -2,-0.2 0.973 113.2 51.3 -50.2 -57.8 9.2 -9.8 -0.1 7 7 A G H X S+ 0 0 0 -4,-2.4 4,-3.1 1,-0.2 -2,-0.2 0.889 110.8 48.4 -48.8 -45.6 6.3 -7.3 0.4 8 8 A K H X S+ 0 0 84 -4,-2.6 4,-3.1 2,-0.2 5,-0.3 0.966 109.0 51.6 -59.3 -56.4 8.2 -5.8 3.4 9 9 A A H X S+ 0 0 65 -4,-3.1 4,-1.3 1,-0.2 -2,-0.2 0.897 114.7 44.2 -49.3 -45.3 11.5 -5.6 1.4 10 10 A V H >X S+ 0 0 6 -4,-2.8 4,-3.2 2,-0.2 3,-0.6 0.971 115.0 48.7 -59.5 -56.6 9.6 -3.7 -1.3 11 11 A F H 3X>S+ 0 0 4 -4,-3.1 5,-2.7 1,-0.3 4,-2.2 0.929 108.6 52.7 -47.6 -60.5 7.8 -1.6 1.2 12 12 A D H 3<5S+ 0 0 80 -4,-3.1 -1,-0.3 1,-0.2 -2,-0.2 0.780 120.5 34.1 -45.1 -40.7 10.9 -0.6 3.1 13 13 A G H <<5S+ 0 0 58 -4,-1.3 -1,-0.2 -3,-0.6 -2,-0.2 0.886 133.6 18.6 -84.1 -46.1 12.6 0.5 -0.2 14 14 A N H <5S+ 0 0 53 -4,-3.2 -3,-0.2 -5,-0.2 -2,-0.2 0.768 129.2 32.2-104.0 -38.0 9.7 2.0 -2.2 15 15 A C T >X5S+ 0 0 17 -4,-2.2 4,-2.8 -5,-0.5 3,-2.5 0.840 101.8 70.2-103.1 -43.7 6.7 2.8 -0.1 16 16 A A H 3>X + 0 0 23 -4,-2.8 3,-1.9 5,-0.2 4,-1.4 0.110 67.8 166.8-114.0 19.2 4.4 5.8 4.3 20 20 A A T 3< S+ 0 0 61 -4,-2.3 2,-0.3 1,-0.3 -1,-0.2 0.426 84.6 6.3 4.0 -82.3 7.4 5.2 6.7 21 21 A G T 34 S- 0 0 53 -5,-0.1 -1,-0.3 2,-0.1 3,-0.1 -0.498 133.7 -63.9-111.2 55.9 5.4 3.3 9.5 22 22 A G T <4 S+ 0 0 4 -3,-1.9 10,-2.1 -2,-0.3 2,-1.0 0.626 105.4 144.8 67.0 15.8 2.1 3.1 7.6 23 23 A G < - 0 0 26 -4,-1.4 2,-0.2 8,-0.2 -3,-0.2 -0.713 47.2-146.9-102.9 85.4 2.6 6.9 8.0 24 24 A N - 0 0 22 -2,-1.0 -5,-0.2 -5,-0.2 6,-0.1 -0.325 13.2-173.0 -51.0 112.1 1.3 8.9 5.0 25 25 A N S S+ 0 0 113 -7,-2.6 -1,-0.2 -2,-0.2 -6,-0.1 0.688 80.7 50.2 -82.0 -22.2 3.7 11.9 4.7 26 26 A V S S+ 0 0 84 1,-0.3 -1,-0.1 -8,-0.2 3,-0.1 0.941 126.2 20.4 -84.6 -53.2 1.6 13.6 1.9 27 27 A I S > S- 0 0 76 3,-0.1 3,-2.0 1,-0.1 -1,-0.3 -0.918 84.1-151.4-117.2 94.6 -1.9 13.4 3.5 28 28 A P T 3 S+ 0 0 102 0, 0.0 -4,-0.2 0, 0.0 -1,-0.1 0.728 89.6 37.8 -40.6 -48.3 -1.1 13.0 7.2 29 29 A D T 3 S+ 0 0 94 1,-0.2 2,-2.0 -6,-0.1 -4,-0.1 0.586 90.4 90.0 -85.5 -13.7 -4.2 11.0 8.2 30 30 A H < + 0 0 45 -3,-2.0 -1,-0.2 -6,-0.1 -3,-0.1 -0.291 66.7 160.3 -84.7 52.3 -4.5 8.9 5.0 31 31 A T - 0 0 39 -2,-2.0 2,-1.1 -7,-0.1 -8,-0.2 -0.256 58.7-100.8 -74.8 163.6 -2.4 6.2 6.7 32 32 A L S S+ 0 0 25 -10,-2.1 2,-0.2 -13,-0.2 -9,-0.1 0.004 78.8 133.6 -77.8 35.6 -2.1 2.5 5.7 33 33 A Q > - 0 0 48 -2,-1.1 4,-3.2 -11,-0.2 5,-0.2 -0.578 68.3-122.0 -86.4 151.2 -4.4 1.7 8.6 34 34 A K H > S+ 0 0 76 50,-0.4 4,-3.2 1,-0.2 5,-0.2 0.966 116.5 44.7 -51.5 -58.6 -7.4 -0.7 8.3 35 35 A A H > S+ 0 0 63 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.864 113.0 50.7 -51.9 -43.2 -9.8 2.1 9.4 36 36 A A H >>S+ 0 0 10 2,-0.2 4,-3.0 1,-0.2 5,-0.6 0.929 112.8 46.4 -71.7 -41.5 -8.1 4.7 7.2 37 37 A I H X5S+ 0 0 12 -4,-3.2 4,-1.9 3,-0.2 7,-0.3 0.969 111.1 51.6 -53.7 -59.1 -8.4 2.4 4.2 38 38 A E H <5S+ 0 0 82 -4,-3.2 -2,-0.2 -5,-0.2 -1,-0.2 0.813 119.3 36.7 -61.9 -32.2 -12.0 1.5 5.0 39 39 A Q H <5S+ 0 0 158 -4,-2.3 -1,-0.2 -5,-0.2 -2,-0.2 0.959 131.1 25.1 -71.7 -64.4 -12.9 5.3 5.2 40 40 A F H <5S+ 0 0 85 -4,-3.0 2,-1.2 -5,-0.2 -3,-0.2 0.894 97.2 92.0 -79.7 -44.9 -10.7 6.7 2.4 41 41 A L ><< - 0 0 12 -4,-1.9 3,-2.8 -5,-0.6 -1,-0.1 -0.455 61.2-154.1 -63.3 97.7 -10.1 3.8 0.0 42 42 A D T 3 S+ 0 0 98 -2,-1.2 -1,-0.2 1,-0.3 7,-0.0 0.808 95.4 49.1 -7.2 -70.9 -12.8 3.9 -2.7 43 43 A G T 3 S- 0 0 35 1,-0.2 6,-0.3 6,-0.1 -1,-0.3 0.420 107.1-133.0 -78.5 1.6 -12.4 0.1 -3.2 44 44 A G < - 0 0 20 -3,-2.8 2,-2.5 -7,-0.3 -1,-0.2 -0.002 51.5 -34.4 74.7 177.8 -12.6 -0.8 0.6 45 45 A F S S+ 0 0 22 4,-0.1 2,-0.3 -7,-0.1 -1,-0.1 -0.424 97.4 128.0 -71.8 72.3 -10.3 -3.1 2.6 46 46 A N > - 0 0 69 -2,-2.5 4,-2.5 1,-0.1 5,-0.1 -0.969 66.3-132.3-135.0 143.0 -9.8 -5.5 -0.3 47 47 A I H > S+ 0 0 62 -2,-0.3 4,-3.1 1,-0.2 5,-0.3 0.951 111.5 54.8 -62.6 -48.0 -6.5 -6.8 -1.8 48 48 A E H > S+ 0 0 128 1,-0.2 4,-3.2 2,-0.2 -1,-0.2 0.920 109.0 47.9 -40.1 -60.1 -7.8 -5.9 -5.3 49 49 A A H > S+ 0 0 9 -6,-0.3 4,-1.9 2,-0.2 -1,-0.2 0.909 113.7 46.7 -54.0 -50.2 -8.4 -2.4 -4.1 50 50 A I H >X S+ 0 0 8 -4,-2.5 4,-2.2 2,-0.2 3,-0.5 0.983 114.7 45.7 -55.3 -61.2 -4.9 -2.1 -2.6 51 51 A V H 3X S+ 0 0 24 -4,-3.1 4,-3.3 1,-0.3 -2,-0.2 0.913 109.5 56.2 -50.3 -51.4 -3.1 -3.6 -5.6 52 52 A Y H 3X S+ 0 0 126 -4,-3.2 4,-2.6 -5,-0.3 5,-0.4 0.870 108.1 47.6 -48.3 -47.0 -5.2 -1.3 -8.0 53 53 A Q H - 0 0 59 3,-0.4 3,-2.0 4,-0.2 2,-0.3 -0.996 50.2 -22.3-150.5 136.5 -4.4 7.6 -7.5 59 59 A G T 3 S- 0 0 84 -2,-0.3 0, 0.0 1,-0.3 0, 0.0 -0.411 133.2 -14.8 59.8-114.4 -4.8 11.2 -6.2 60 60 A A T 3 S+ 0 0 75 -2,-0.3 -1,-0.3 2,-0.1 -3,-0.0 -0.007 113.8 105.0-108.6 24.6 -1.2 12.3 -5.1 61 61 A M < - 0 0 39 -3,-2.0 -3,-0.4 -8,-0.0 2,-0.0 -0.929 70.0-123.6-108.2 129.1 0.3 8.7 -5.2 62 62 A P - 0 0 79 0, 0.0 -5,-0.3 0, 0.0 2,-0.3 -0.292 27.1-110.1 -69.3 156.3 2.6 7.6 -8.1 63 63 A A - 0 0 27 -7,-0.3 -7,-0.2 -6,-0.2 -8,-0.2 -0.628 19.3-164.8 -88.0 143.5 1.8 4.6 -10.2 64 64 A W >> + 0 0 54 -10,-2.2 3,-2.2 -9,-0.9 4,-1.8 0.334 35.2 145.5-114.4 5.6 4.0 1.4 -9.9 65 65 A D T 34 S- 0 0 71 -10,-2.1 4,-0.1 1,-0.3 -2,-0.1 -0.160 83.3 -7.8 -44.0 119.4 2.7 -0.3 -13.1 66 66 A G T 34 S+ 0 0 81 2,-0.4 -1,-0.3 1,-0.1 3,-0.1 0.398 117.1 89.8 67.3 -2.4 5.7 -2.2 -14.5 67 67 A R T <4 S+ 0 0 139 -3,-2.2 2,-0.3 1,-0.1 -2,-0.2 0.828 95.3 35.9 -85.7 -38.4 8.1 -0.7 -12.0 68 68 A L S < S- 0 0 12 -4,-1.8 -2,-0.4 1,-0.1 -1,-0.1 -0.817 97.6-110.4-104.1 151.3 7.5 -3.6 -9.6 69 69 A D > - 0 0 102 -2,-0.3 4,-3.1 1,-0.1 5,-0.2 -0.256 31.7-105.1 -68.7 168.7 6.8 -7.2 -10.8 70 70 A E H > S+ 0 0 170 2,-0.2 4,-2.7 1,-0.2 5,-0.2 0.924 123.5 43.8 -61.5 -47.0 3.4 -8.8 -10.6 71 71 A D H > S+ 0 0 58 2,-0.2 4,-2.6 1,-0.2 -1,-0.2 0.938 114.6 50.4 -66.2 -45.2 4.5 -11.0 -7.6 72 72 A E H > S+ 0 0 55 2,-0.2 4,-2.9 1,-0.2 5,-0.2 0.961 111.6 47.2 -53.1 -60.2 6.3 -8.0 -6.0 73 73 A I H X S+ 0 0 13 -4,-3.1 4,-2.7 1,-0.2 -2,-0.2 0.931 114.3 48.1 -43.7 -57.2 3.1 -5.8 -6.4 74 74 A A H X S+ 0 0 32 -4,-2.7 4,-2.8 -5,-0.2 -1,-0.2 0.874 111.8 50.5 -57.6 -37.0 1.0 -8.6 -5.0 75 75 A G H X S+ 0 0 0 -4,-2.6 4,-3.1 2,-0.2 -2,-0.2 0.930 110.2 47.8 -70.3 -46.4 3.5 -9.1 -2.1 76 76 A V H X S+ 0 0 2 -4,-2.9 4,-2.8 2,-0.2 5,-0.2 0.930 114.1 47.9 -63.4 -43.4 3.5 -5.4 -1.2 77 77 A A H X S+ 0 0 0 -4,-2.7 4,-2.9 -5,-0.2 -2,-0.2 0.971 113.6 47.1 -56.6 -55.6 -0.3 -5.3 -1.3 78 78 A A H X S+ 0 0 22 -4,-2.8 4,-2.9 1,-0.2 -2,-0.2 0.908 113.3 49.6 -51.9 -47.6 -0.5 -8.5 0.8 79 79 A Y H X S+ 0 0 17 -4,-3.1 4,-3.0 -76,-0.3 5,-0.2 0.943 111.1 47.7 -57.5 -54.2 2.1 -7.1 3.3 80 80 A V H X S+ 0 0 10 -4,-2.8 4,-2.9 1,-0.2 -2,-0.2 0.928 113.5 49.5 -53.2 -46.7 0.2 -3.8 3.7 81 81 A Y H X S+ 0 0 61 -4,-2.9 4,-3.2 -5,-0.2 5,-0.3 0.930 112.2 47.5 -57.5 -48.8 -3.0 -5.8 4.2 82 82 A D H X S+ 0 0 52 -4,-2.9 4,-2.9 2,-0.2 -2,-0.2 0.903 112.9 48.5 -59.3 -47.7 -1.4 -8.0 6.8 83 83 A Q H X>S+ 0 0 22 -4,-3.0 5,-2.5 2,-0.2 4,-1.0 0.946 116.0 43.9 -57.6 -51.9 0.1 -5.0 8.6 84 84 A A H ><5S+ 0 0 2 -4,-2.9 3,-1.2 -5,-0.2 -50,-0.4 0.975 117.6 43.7 -57.2 -60.4 -3.3 -3.2 8.6 85 85 A A H 3<5S+ 0 0 58 -4,-3.2 -2,-0.2 1,-0.3 -1,-0.2 0.894 121.5 40.5 -51.8 -49.2 -5.3 -6.3 9.6 86 86 A G H 3<5S- 0 0 41 -4,-2.9 -1,-0.3 -5,-0.3 -2,-0.2 0.583 107.2-125.7 -72.5 -16.6 -2.8 -7.2 12.3 87 87 A N T <<5 + 0 0 91 -3,-1.2 -3,-0.2 -4,-1.0 -4,-0.1 0.986 55.6 152.1 48.9 66.5 -2.2 -3.7 13.4 88 88 A K < 0 0 92 -5,-2.5 -4,-0.2 -6,-0.1 -5,-0.1 0.120 360.0 360.0-105.6 16.3 1.5 -3.9 12.9 89 89 A W 0 0 75 -6,-0.5 -5,-0.1 -5,-0.2 -1,-0.1 0.752 360.0 360.0 -89.8 360.0 1.6 -0.2 12.3