==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT (CYTOCHROME) 01-MAY-95 1CGN . COMPND 2 MOLECULE: CYTOCHROME C; . SOURCE 2 ORGANISM_SCIENTIFIC: ACHROMOBACTER XYLOSOXIDANS; . AUTHOR A.J.DOBBS,H.R.FABER,B.F.ANDERSON,E.N.BAKER . 125 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6853.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 104 83.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 18 14.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 77 61.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A X 0 0 170 0, 0.0 2,-0.5 0, 0.0 57,-0.0 0.000 360.0 360.0 360.0 4.1 -9.5 30.4 33.3 2 2 A F - 0 0 64 1,-0.1 6,-0.0 6,-0.0 4,-0.0 -0.903 360.0-174.9-114.7 127.6 -8.8 34.1 33.0 3 3 A A S S+ 0 0 98 -2,-0.5 -1,-0.1 1,-0.1 3,-0.0 0.869 79.3 24.7 -75.6 -44.0 -11.2 36.9 32.0 4 4 A K S >> S- 0 0 48 1,-0.1 4,-1.0 59,-0.0 3,-0.7 -0.862 79.5-118.5-122.7 158.5 -8.7 39.8 31.9 5 5 A P H >> S+ 0 0 57 0, 0.0 4,-2.2 0, 0.0 3,-0.6 0.869 113.4 63.6 -62.0 -35.1 -5.0 39.7 31.4 6 6 A E H 3> S+ 0 0 129 1,-0.3 4,-2.7 2,-0.2 5,-0.2 0.829 97.6 56.3 -57.7 -33.7 -4.5 41.2 34.8 7 7 A D H <> S+ 0 0 78 -3,-0.7 4,-2.2 2,-0.2 -1,-0.3 0.852 106.4 48.0 -69.7 -35.5 -6.0 38.1 36.3 8 8 A A H < S+ 0 0 35 -4,-2.4 3,-2.1 -5,-0.2 4,-0.4 0.944 115.9 49.7 -80.2 -55.4 12.1 26.5 47.5 24 24 A G H >< S+ 0 0 38 -4,-3.1 3,-1.6 -5,-0.3 -2,-0.2 0.804 97.7 69.2 -52.1 -36.8 13.8 29.2 49.5 25 25 A R T 3< S+ 0 0 134 -4,-2.0 4,-0.3 -5,-0.3 -1,-0.3 0.711 93.7 58.7 -60.7 -19.2 12.8 27.8 52.8 26 26 A M T <> S+ 0 0 3 -3,-2.1 4,-2.7 -4,-0.2 5,-0.3 0.592 78.6 90.3 -88.6 -8.9 15.1 24.8 52.2 27 27 A A H <> S+ 0 0 30 -3,-1.6 4,-2.2 -4,-0.4 6,-0.2 0.905 85.4 49.5 -53.2 -47.2 18.3 26.9 51.9 28 28 A P H 4>S+ 0 0 52 0, 0.0 5,-2.1 0, 0.0 6,-1.5 0.837 113.7 47.9 -63.9 -30.9 19.2 26.9 55.7 29 29 A V H >45S+ 0 0 14 -4,-0.3 3,-1.0 -3,-0.3 -2,-0.2 0.929 112.0 47.2 -72.3 -44.8 18.8 23.2 55.7 30 30 A V H 3<5S+ 0 0 12 -4,-2.7 -1,-0.2 1,-0.3 -3,-0.2 0.825 113.3 50.9 -64.6 -31.0 20.8 22.6 52.6 31 31 A K T 3<5S- 0 0 95 -4,-2.2 -1,-0.3 -5,-0.3 -2,-0.2 0.530 116.2-114.4 -85.5 -7.6 23.5 24.9 54.1 32 32 A G T < 5S+ 0 0 56 -3,-1.0 -3,-0.2 -4,-0.3 -2,-0.1 0.568 87.6 113.3 88.0 2.7 23.6 23.0 57.3 33 33 A Q S - 0 0 89 -2,-0.7 4,-2.4 1,-0.1 5,-0.2 -0.969 16.6-157.1-121.0 109.8 14.6 16.0 58.6 38 38 A A H > S+ 0 0 42 -2,-0.6 4,-2.6 1,-0.2 5,-0.2 0.846 91.0 49.7 -51.6 -45.8 14.1 13.8 55.6 39 39 A A H > S+ 0 0 70 2,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.902 111.1 48.4 -63.7 -44.2 10.3 13.5 56.0 40 40 A Q H > S+ 0 0 118 2,-0.2 4,-2.2 1,-0.2 -2,-0.2 0.920 114.4 46.9 -63.3 -45.2 9.8 17.3 56.4 41 41 A I H X S+ 0 0 6 -4,-2.4 4,-2.7 1,-0.2 5,-0.2 0.935 109.7 53.5 -63.6 -45.5 11.9 18.0 53.4 42 42 A K H X S+ 0 0 63 -4,-2.6 4,-2.1 1,-0.2 -1,-0.2 0.902 110.6 46.7 -57.1 -43.1 10.2 15.3 51.3 43 43 A A H X S+ 0 0 61 -4,-2.1 4,-1.8 2,-0.2 -1,-0.2 0.920 110.5 52.0 -69.3 -38.0 6.8 16.7 52.0 44 44 A N H X S+ 0 0 20 -4,-2.2 4,-2.8 2,-0.2 -2,-0.2 0.929 109.6 50.0 -62.9 -43.3 7.9 20.3 51.3 45 45 A V H X S+ 0 0 2 -4,-2.7 4,-3.2 1,-0.2 5,-0.2 0.897 104.6 58.3 -62.9 -37.4 9.3 19.1 47.9 46 46 A E H X S+ 0 0 58 -4,-2.1 4,-1.6 -5,-0.2 -1,-0.2 0.947 109.6 44.2 -56.8 -46.1 6.1 17.4 47.1 47 47 A V H X S+ 0 0 64 -4,-1.8 4,-2.9 1,-0.2 3,-0.3 0.954 113.5 51.0 -61.6 -48.6 4.3 20.8 47.5 48 48 A L H X S+ 0 0 2 -4,-2.8 4,-3.0 1,-0.2 -1,-0.2 0.903 106.1 54.7 -55.2 -44.0 7.0 22.5 45.5 49 49 A K H < S+ 0 0 63 -4,-3.2 4,-0.5 2,-0.2 -1,-0.2 0.887 110.2 46.9 -59.5 -38.8 6.7 20.0 42.7 50 50 A T H >X S+ 0 0 92 -4,-1.6 3,-1.1 -3,-0.3 4,-0.7 0.940 113.1 48.6 -69.3 -45.5 3.0 20.7 42.5 51 51 A L H >< S+ 0 0 20 -4,-2.9 3,-1.1 1,-0.2 -2,-0.2 0.886 101.1 65.4 -62.3 -39.7 3.5 24.4 42.6 52 52 A T T 3< S+ 0 0 2 -4,-3.0 -1,-0.2 1,-0.3 4,-0.2 0.645 98.3 52.6 -61.9 -14.5 6.2 24.3 39.9 53 53 A A T <4 S+ 0 0 52 -3,-1.1 4,-0.4 -4,-0.5 3,-0.3 0.725 96.6 74.1 -92.0 -19.2 3.9 23.1 37.2 54 54 A L S X< S+ 0 0 60 -3,-1.1 3,-0.8 -4,-0.7 4,-0.3 0.861 82.3 56.4 -60.8 -51.5 1.4 25.9 37.8 55 55 A P G > S+ 0 0 0 0, 0.0 3,-2.0 0, 0.0 -1,-0.2 0.818 90.7 70.6 -58.1 -37.6 2.7 29.2 36.4 56 56 A W G > S+ 0 0 39 -3,-0.3 3,-1.1 1,-0.3 -2,-0.1 0.786 90.7 60.0 -53.3 -34.9 3.4 28.2 32.8 57 57 A A G < S+ 0 0 79 -3,-0.8 3,-0.3 -4,-0.4 -1,-0.3 0.589 96.7 63.3 -72.2 -12.7 -0.3 27.9 31.9 58 58 A A G < S+ 0 0 0 -3,-2.0 -1,-0.2 -4,-0.3 -46,-0.2 0.095 84.3 76.2 -99.7 20.9 -0.8 31.6 32.8 59 59 A F < + 0 0 28 -3,-1.1 -1,-0.2 -47,-0.1 3,-0.1 -0.143 65.2 140.2-118.6 35.2 1.5 33.0 30.1 60 60 A G > - 0 0 36 -3,-0.3 3,-1.9 1,-0.2 13,-0.1 -0.320 66.9 -72.8 -76.2 167.4 -0.8 32.5 27.2 61 61 A A T 3 S+ 0 0 93 1,-0.3 -1,-0.2 2,-0.1 -2,-0.0 -0.282 124.5 34.5 -55.7 133.9 -1.1 35.0 24.3 62 62 A G T 3 S+ 0 0 36 -3,-0.1 -1,-0.3 3,-0.0 -2,-0.1 0.466 91.0 97.3 97.4 -2.2 -2.9 38.0 25.6 63 63 A T < + 0 0 17 -3,-1.9 -2,-0.1 -4,-0.1 -3,-0.0 0.059 48.4 146.4-107.1 22.6 -1.5 37.8 29.1 64 64 A E + 0 0 100 3,-0.0 2,-0.3 -5,-0.0 -55,-0.1 -0.344 32.5 75.6 -58.9 140.4 1.2 40.4 28.4 65 65 A G > + 0 0 31 3,-0.3 3,-1.6 1,-0.1 -2,-0.1 -0.872 55.3 60.0 144.3-175.8 1.9 42.4 31.5 66 66 A G T 3 S- 0 0 35 -2,-0.3 -1,-0.1 1,-0.2 -56,-0.0 -0.215 115.5 -37.2 58.3-147.6 3.7 42.3 34.9 67 67 A D T 3 S+ 0 0 90 58,-0.1 58,-3.5 2,-0.1 2,-0.5 0.123 99.4 126.7 -94.8 21.8 7.4 41.7 34.7 68 68 A A B < -A 124 0A 10 -3,-1.6 -3,-0.3 56,-0.2 56,-0.2 -0.674 57.9-132.7 -81.1 125.6 7.1 39.2 31.8 69 69 A R > - 0 0 87 54,-2.4 3,-1.8 -2,-0.5 4,-0.3 -0.464 16.7-120.4 -74.4 152.8 9.4 40.2 28.9 70 70 A P T >> S+ 0 0 75 0, 0.0 3,-1.9 0, 0.0 4,-1.7 0.751 107.1 76.3 -63.4 -23.8 7.8 40.2 25.4 71 71 A E H 3> S+ 0 0 72 1,-0.3 4,-2.5 2,-0.2 8,-0.2 0.647 76.6 74.1 -59.6 -20.4 10.3 37.6 24.4 72 72 A I H <4 S+ 0 0 8 -3,-1.8 -1,-0.3 51,-0.2 7,-0.2 0.886 110.8 29.3 -59.4 -36.3 8.3 35.1 26.3 73 73 A W H X4 S+ 0 0 60 -3,-1.9 3,-0.7 -4,-0.3 -2,-0.2 0.806 122.8 48.1 -88.9 -41.4 5.8 35.4 23.3 74 74 A S H 3< S+ 0 0 99 -4,-1.7 -3,-0.2 1,-0.2 3,-0.2 0.860 125.7 32.5 -67.1 -38.6 8.3 36.2 20.4 75 75 A D T 3X S+ 0 0 72 -4,-2.5 4,-1.8 -5,-0.2 3,-0.4 -0.409 73.1 149.0-118.8 53.3 10.5 33.4 21.6 76 76 A A H <> S+ 0 0 57 -3,-0.7 4,-2.6 1,-0.2 5,-0.2 0.841 70.9 56.2 -56.3 -40.3 8.1 30.8 22.9 77 77 A A H > S+ 0 0 71 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.892 108.3 48.0 -62.5 -39.7 10.2 27.8 22.0 78 78 A G H > S+ 0 0 7 -3,-0.4 4,-2.0 1,-0.2 -1,-0.2 0.828 111.8 51.3 -67.2 -33.9 13.0 29.2 24.0 79 79 A F H X S+ 0 0 17 -4,-1.8 4,-2.4 -7,-0.2 -2,-0.2 0.907 108.2 50.5 -70.3 -41.6 10.6 29.8 26.9 80 80 A K H X S+ 0 0 67 -4,-2.6 4,-3.1 2,-0.2 5,-0.2 0.905 110.1 51.1 -62.0 -42.4 9.3 26.3 26.8 81 81 A Q H X S+ 0 0 133 -4,-2.0 4,-3.1 2,-0.2 5,-0.3 0.948 109.6 49.1 -60.5 -49.4 12.8 24.9 26.8 82 82 A K H X S+ 0 0 58 -4,-2.0 4,-1.5 1,-0.2 -1,-0.2 0.929 113.1 48.2 -58.0 -43.3 13.7 27.0 29.8 83 83 A Q H X S+ 0 0 41 -4,-2.4 4,-2.2 2,-0.2 -2,-0.2 0.915 111.9 48.6 -65.7 -39.9 10.5 25.9 31.6 84 84 A Q H X S+ 0 0 43 -4,-3.1 4,-2.5 2,-0.2 5,-0.3 0.935 107.7 52.7 -68.7 -42.8 11.2 22.2 30.8 85 85 A A H X S+ 0 0 47 -4,-3.1 4,-1.7 -5,-0.2 -1,-0.2 0.897 110.5 52.4 -57.0 -34.0 14.8 22.2 31.9 86 86 A F H X S+ 0 0 13 -4,-1.5 4,-1.8 -5,-0.3 -2,-0.2 0.913 107.9 47.2 -67.8 -47.1 13.4 23.7 35.2 87 87 A Q H X S+ 0 0 53 -4,-2.2 4,-2.0 1,-0.2 -1,-0.2 0.888 109.4 56.2 -64.1 -34.3 10.8 21.0 35.7 88 88 A D H X S+ 0 0 109 -4,-2.5 4,-2.0 1,-0.2 -1,-0.2 0.876 106.4 49.4 -62.4 -41.5 13.4 18.4 35.0 89 89 A N H X S+ 0 0 26 -4,-1.7 4,-2.3 -5,-0.3 -1,-0.2 0.877 106.3 56.8 -67.4 -33.2 15.6 19.8 37.7 90 90 A I H X S+ 0 0 3 -4,-1.8 4,-2.9 1,-0.2 -2,-0.2 0.934 104.1 53.6 -62.6 -40.9 12.6 19.7 40.0 91 91 A V H X S+ 0 0 87 -4,-2.0 4,-2.5 1,-0.2 -1,-0.2 0.942 107.8 49.5 -58.9 -44.5 12.3 16.1 39.3 92 92 A K H X S+ 0 0 95 -4,-2.0 4,-2.2 1,-0.2 -1,-0.2 0.906 109.8 51.5 -60.3 -42.1 15.9 15.6 40.3 93 93 A L H X S+ 0 0 0 -4,-2.3 4,-2.7 1,-0.2 -1,-0.2 0.949 108.7 51.5 -58.3 -47.7 15.3 17.5 43.5 94 94 A S H X S+ 0 0 22 -4,-2.9 4,-2.6 1,-0.2 5,-0.2 0.920 109.0 49.9 -55.7 -46.5 12.4 15.3 44.2 95 95 A A H X S+ 0 0 56 -4,-2.5 4,-1.6 2,-0.2 -1,-0.2 0.911 109.9 50.9 -62.6 -40.4 14.5 12.2 43.7 96 96 A A H X>S+ 0 0 6 -4,-2.2 5,-1.5 1,-0.2 4,-0.6 0.924 111.6 49.0 -63.0 -41.3 17.2 13.5 46.1 97 97 A A H ><5S+ 0 0 2 -4,-2.7 3,-1.2 1,-0.2 -55,-0.2 0.918 108.2 52.3 -63.7 -43.5 14.6 14.2 48.6 98 98 A D H 3<5S+ 0 0 103 -4,-2.6 -1,-0.2 1,-0.3 -2,-0.2 0.820 108.0 52.3 -63.9 -31.4 13.0 10.8 48.4 99 99 A A H 3<5S- 0 0 71 -4,-1.6 -1,-0.3 -5,-0.2 -2,-0.2 0.632 104.3-130.7 -82.5 -11.4 16.2 9.2 48.9 100 100 A G T <<5 + 0 0 35 -3,-1.2 2,-0.6 -4,-0.6 -3,-0.2 0.836 55.3 146.1 66.8 31.9 17.0 11.2 52.1 101 101 A D >< - 0 0 54 -5,-1.5 4,-3.0 1,-0.1 5,-0.2 -0.914 36.3-165.6-109.7 108.3 20.5 12.2 50.9 102 102 A L H > S+ 0 0 57 -2,-0.6 4,-2.0 1,-0.2 5,-0.1 0.796 89.1 53.5 -58.4 -34.1 21.7 15.6 52.0 103 103 A D H > S+ 0 0 116 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.918 111.5 44.8 -69.7 -41.9 24.5 15.7 49.5 104 104 A K H > S+ 0 0 79 1,-0.2 4,-2.9 2,-0.2 5,-0.3 0.929 112.8 51.0 -66.4 -47.5 22.3 14.9 46.6 105 105 A L H X S+ 0 0 2 -4,-3.0 4,-2.8 -9,-0.3 -1,-0.2 0.919 109.1 51.7 -57.0 -41.3 19.8 17.4 47.8 106 106 A R H X S+ 0 0 155 -4,-2.0 4,-1.7 -5,-0.2 -1,-0.2 0.953 112.1 44.7 -61.0 -50.6 22.4 20.1 48.1 107 107 A A H X S+ 0 0 57 -4,-2.2 4,-2.0 2,-0.2 -2,-0.2 0.938 115.6 47.2 -60.7 -48.2 23.7 19.5 44.6 108 108 A A H X S+ 0 0 8 -4,-2.9 4,-2.7 1,-0.2 5,-0.3 0.849 106.6 59.4 -62.5 -36.0 20.1 19.4 43.1 109 109 A F H X S+ 0 0 31 -4,-2.8 4,-2.6 -5,-0.3 -1,-0.2 0.938 106.1 46.8 -58.4 -44.1 19.2 22.4 45.0 110 110 A G H X S+ 0 0 41 -4,-1.7 4,-2.3 2,-0.2 -2,-0.2 0.905 110.6 53.2 -64.1 -41.7 22.0 24.3 43.3 111 111 A D H X S+ 0 0 68 -4,-2.0 4,-1.4 2,-0.2 -2,-0.2 0.948 110.2 46.9 -60.6 -48.9 20.9 22.9 39.9 112 112 A V H >X S+ 0 0 1 -4,-2.7 4,-2.0 1,-0.2 3,-0.6 0.938 110.7 52.7 -57.2 -50.4 17.3 24.1 40.4 113 113 A G H 3X S+ 0 0 24 -4,-2.6 4,-2.0 -5,-0.3 -1,-0.2 0.891 106.2 51.9 -56.7 -38.8 18.4 27.4 41.5 114 114 A A H 3X S+ 0 0 63 -4,-2.3 4,-2.3 1,-0.2 -1,-0.3 0.852 107.3 56.2 -67.4 -26.2 20.5 27.9 38.5 115 115 A S H X S+ 0 0 19 -4,-1.8 4,-3.1 1,-0.2 3,-0.7 0.955 111.7 51.1 -65.3 -47.0 14.9 31.8 33.0 120 120 A H H 3X S+ 0 0 71 -4,-2.3 4,-1.9 1,-0.2 -1,-0.2 0.897 102.9 61.8 -55.6 -40.9 14.9 35.1 34.6 121 121 A D H 3< S+ 0 0 105 -4,-2.5 -1,-0.2 1,-0.2 -2,-0.2 0.843 118.5 25.1 -54.9 -39.5 18.0 36.1 32.7 122 122 A S H << S+ 0 0 47 -4,-1.2 -1,-0.2 -3,-0.7 -2,-0.2 0.736 134.2 27.7 -95.2 -32.8 16.2 35.9 29.3 123 123 A Y H < S+ 0 0 9 -4,-3.1 -54,-2.4 -5,-0.2 2,-0.4 0.440 95.3 78.1-118.6 0.9 12.5 36.3 30.2 124 124 A R B < A 68 0A 130 -4,-1.9 -56,-0.2 -5,-0.4 -57,-0.0 -0.922 360.0 360.0-112.2 140.5 11.9 38.4 33.3 125 125 A K 0 0 143 -58,-3.5 -2,-0.1 -2,-0.4 -58,-0.1 -0.482 360.0 360.0 -71.5 360.0 12.1 42.2 33.2