==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 27-FEB-06 2CG6 . COMPND 2 MOLECULE: HUMAN FIBRONECTIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR E.RUDINO-PINERA,R.B.G.RAVELLI,G.M.SHELDRICK,M.H.NANAO, . 90 1 4 4 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6278.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 57.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 37 41.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 7.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 62 A A 0 0 154 0, 0.0 2,-0.3 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 143.6 14.1 -0.6 24.1 2 63 A E - 0 0 106 1,-0.0 0, 0.0 0, 0.0 0, 0.0 -0.915 360.0 -73.3-135.5 171.2 16.0 0.2 27.3 3 64 A E - 0 0 92 -2,-0.3 13,-2.6 12,-0.1 2,-0.3 -0.298 61.2-157.7 -60.6 145.9 16.4 -1.4 30.7 4 65 A T E -A 15 0A 66 11,-0.3 2,-0.3 31,-0.1 11,-0.2 -0.804 23.1-148.2-129.4 166.1 13.2 -1.1 32.8 5 66 A a E -A 14 0A 2 9,-2.2 9,-2.6 -2,-0.3 2,-0.5 -0.968 15.5-144.9-123.5 151.4 11.6 -1.1 36.2 6 67 A F E -A 13 0A 122 33,-0.4 2,-0.7 -2,-0.3 7,-0.2 -0.973 8.0-153.7-118.1 125.1 8.1 -2.3 37.1 7 68 A D > - 0 0 0 5,-2.7 4,-2.0 -2,-0.5 5,-0.5 -0.855 2.9-163.7-102.1 110.5 6.2 -0.4 39.8 8 69 A K T 4 S+ 0 0 158 -2,-0.7 -1,-0.1 1,-0.2 5,-0.0 0.704 87.6 53.2 -67.0 -18.8 3.7 -2.7 41.4 9 70 A Y T 4 S+ 0 0 108 1,-0.1 -1,-0.2 3,-0.1 -2,-0.0 0.778 119.0 30.1 -86.4 -35.7 1.8 0.4 42.9 10 71 A T T 4 S- 0 0 37 -3,-0.3 -2,-0.2 2,-0.2 -1,-0.1 0.582 98.8-135.2 -90.0 -19.1 1.3 2.4 39.8 11 72 A G < + 0 0 44 -4,-2.0 2,-0.3 1,-0.3 -3,-0.2 0.550 62.9 123.7 75.4 8.2 1.1 -0.7 37.6 12 73 A N - 0 0 88 -5,-0.5 -5,-2.7 0, 0.0 2,-0.4 -0.667 59.6-132.0-104.7 155.1 3.4 0.9 35.0 13 74 A T E -A 6 0A 95 -2,-0.3 2,-0.3 -7,-0.2 -7,-0.2 -0.890 27.4-167.9 -98.3 136.7 6.7 -0.1 33.4 14 75 A Y E -A 5 0A 26 -9,-2.6 -9,-2.2 -2,-0.4 2,-0.3 -0.862 18.4-123.2-119.4 153.7 9.4 2.7 33.4 15 76 A R E > -A 4 0A 112 -2,-0.3 3,-2.8 -11,-0.2 18,-0.3 -0.776 46.8 -83.4 -95.6 151.2 12.7 3.0 31.5 16 77 A V T 3 S+ 0 0 51 -13,-2.6 18,-0.2 -2,-0.3 -1,-0.1 -0.141 120.4 30.6 -50.7 135.7 15.9 3.5 33.5 17 78 A G T 3 S+ 0 0 56 16,-3.1 -1,-0.3 1,-0.4 17,-0.1 0.084 89.0 127.4 96.0 -22.3 16.3 7.3 34.1 18 79 A D < - 0 0 48 -3,-2.8 15,-2.8 15,-0.1 -1,-0.4 -0.390 42.8-159.5 -64.7 142.2 12.5 7.9 34.3 19 80 A T E +B 32 0B 103 13,-0.2 2,-0.3 -3,-0.1 13,-0.2 -0.903 19.7 157.9-121.2 150.3 11.2 9.7 37.3 20 81 A Y E -B 31 0B 27 11,-2.3 11,-3.1 -2,-0.3 2,-0.4 -0.968 40.2 -97.8-158.1 172.0 7.6 9.6 38.5 21 82 A E E -B 30 0B 122 -2,-0.3 9,-0.2 9,-0.2 7,-0.0 -0.867 27.5-159.0-104.4 136.0 5.1 10.0 41.3 22 83 A R E -B 29 0B 32 7,-2.8 7,-2.4 -2,-0.4 2,-0.4 -0.915 6.3-152.0-116.8 104.0 3.9 7.0 43.1 23 84 A P E +B 28 0B 81 0, 0.0 2,-0.3 0, 0.0 5,-0.2 -0.593 31.2 161.1 -66.3 122.6 0.5 7.4 45.0 24 85 A K E > -B 27 0B 55 3,-1.3 3,-1.7 -2,-0.4 -2,-0.1 -0.930 60.9 -14.1-147.9 129.3 0.7 4.9 47.9 25 86 A D T 3 S- 0 0 125 -2,-0.3 3,-0.1 1,-0.3 -1,-0.1 0.892 127.6 -52.2 52.0 47.5 -1.3 4.8 51.2 26 87 A S T 3 S+ 0 0 119 1,-0.2 -1,-0.3 56,-0.0 2,-0.2 0.667 120.9 105.7 59.1 20.3 -2.6 8.4 50.6 27 88 A M E < -B 24 0B 40 -3,-1.7 -3,-1.3 -5,-0.1 2,-0.4 -0.656 66.3-134.3-111.6 171.0 0.9 9.7 50.1 28 89 A I E -B 23 0B 73 53,-0.5 18,-0.5 -2,-0.2 2,-0.4 -0.963 22.4-167.0-123.2 114.1 2.8 10.8 47.0 29 90 A W E -B 22 0B 63 -7,-2.4 -7,-2.8 -2,-0.4 2,-0.7 -0.797 18.7-132.4 -94.0 147.3 6.4 9.3 46.8 30 91 A D E -BC 21 44B 70 14,-2.6 14,-2.4 -2,-0.4 2,-0.3 -0.867 35.1-172.8-102.6 114.8 8.8 10.7 44.3 31 92 A b E -BC 20 43B 2 -11,-3.1 -11,-2.3 -2,-0.7 2,-0.4 -0.748 21.4-162.6-116.2 158.6 10.5 7.8 42.5 32 93 A T E -BC 19 42B 46 10,-2.1 10,-2.6 -2,-0.3 2,-1.0 -0.999 25.1-128.9-135.0 130.5 13.3 7.1 40.0 33 94 A a E + C 0 41B 1 -15,-2.8 -16,-3.1 -2,-0.4 8,-0.2 -0.746 35.6 168.3 -74.5 103.1 13.8 4.0 37.9 34 95 A I E - 0 0 86 6,-2.1 2,-1.6 -2,-1.0 7,-0.2 0.792 14.1-170.0 -83.2 -41.2 17.5 3.2 38.7 35 96 A G E > > - C 0 40B 0 5,-2.2 5,-2.2 1,-0.2 3,-2.1 -0.613 7.6-175.2 86.2 -83.7 17.7 -0.3 37.2 36 97 A A T 3 5S- 0 0 74 -2,-1.6 -1,-0.2 1,-0.3 -2,-0.0 0.825 78.4 -63.7 55.1 32.1 21.2 -1.3 38.6 37 98 A G T 3 5S+ 0 0 35 -3,-0.2 -1,-0.3 3,-0.1 -2,-0.1 0.301 138.2 67.3 78.0 -0.0 20.7 -4.5 36.5 38 99 A R T < 5S- 0 0 201 -3,-2.1 -2,-0.1 2,-0.0 -3,-0.1 -0.031 111.7 -96.6-144.8 28.3 17.7 -5.5 38.5 39 100 A G T 5 + 0 0 26 -35,-0.2 -33,-0.4 1,-0.2 2,-0.2 0.721 60.8 178.8 63.3 26.2 14.7 -3.1 38.0 40 101 A R E < -C 35 0B 163 -5,-2.2 -5,-2.2 -35,-0.1 -6,-2.1 -0.371 13.6-159.6 -73.3 131.9 15.6 -1.2 41.2 41 102 A I E -C 33 0B 42 -8,-0.2 2,-0.5 -7,-0.2 -8,-0.2 -0.890 4.1-156.6-110.2 141.0 13.5 1.8 42.1 42 103 A S E -C 32 0B 65 -10,-2.6 -10,-2.1 -2,-0.4 2,-0.4 -0.967 16.5-178.3-117.9 127.9 14.6 4.6 44.5 43 104 A b E -C 31 0B 36 -2,-0.5 2,-0.3 -12,-0.2 -12,-0.2 -0.964 9.3-167.6-129.9 142.3 11.8 6.6 46.2 44 105 A T E -C 30 0B 89 -14,-2.4 -14,-2.6 -2,-0.4 2,-0.4 -0.912 10.9-145.4-121.5 149.2 11.9 9.6 48.5 45 106 A I - 0 0 32 -2,-0.3 2,-0.2 -16,-0.2 -16,-0.1 -0.938 23.4-111.1-117.9 144.6 9.2 11.1 50.6 46 107 A A - 0 0 46 -18,-0.5 37,-0.4 -2,-0.4 35,-0.2 -0.451 21.6-171.4 -68.6 126.1 8.7 14.7 51.5 47 108 A N + 0 0 104 -2,-0.2 11,-0.7 35,-0.1 2,-0.3 -0.477 60.0 83.6-110.0 60.2 9.2 15.7 55.1 48 109 A R E -D 57 0C 121 9,-0.2 2,-0.3 31,-0.1 9,-0.2 -0.969 67.1-130.0-152.5 160.4 7.9 19.3 54.7 49 110 A c E -D 56 0C 0 7,-2.3 7,-2.9 -2,-0.3 2,-0.5 -0.893 10.2-158.3-113.0 148.0 4.6 21.2 54.7 50 111 A H E +D 55 0C 115 33,-0.4 2,-0.4 -2,-0.3 5,-0.2 -0.978 25.7 156.1-128.0 112.7 3.4 23.6 52.0 51 112 A E E > -D 54 0C 34 3,-2.0 3,-2.4 -2,-0.5 -2,-0.1 -0.998 62.7 -6.3-142.4 137.9 0.7 26.0 53.2 52 113 A G T 3 S- 0 0 68 -2,-0.4 3,-0.1 1,-0.3 -1,-0.1 0.690 127.7 -54.6 57.6 25.6 -0.4 29.5 52.0 53 114 A G T 3 S+ 0 0 81 1,-0.3 2,-0.3 0, 0.0 -1,-0.3 0.432 116.9 109.8 83.2 3.2 2.6 29.7 49.5 54 115 A Q E < -D 51 0C 119 -3,-2.4 -3,-2.0 2,-0.0 2,-0.4 -0.781 60.5-138.5-105.2 154.4 5.2 29.0 52.2 55 116 A S E -D 50 0C 50 -2,-0.3 2,-0.4 -5,-0.2 -5,-0.2 -0.928 22.7-170.8-110.0 135.9 7.3 25.9 52.8 56 117 A Y E -D 49 0C 32 -7,-2.9 -7,-2.3 -2,-0.4 2,-0.1 -0.965 18.2-131.1-130.1 138.9 7.9 24.6 56.4 57 118 A K E > -D 48 0C 136 -2,-0.4 3,-2.1 -9,-0.2 20,-0.3 -0.477 50.1 -79.6 -76.0 161.3 10.1 22.0 58.0 58 119 A I T 3 S+ 0 0 79 -11,-0.7 20,-0.2 1,-0.3 -1,-0.1 -0.436 123.1 25.6 -63.4 134.7 8.6 19.5 60.3 59 120 A G T 3 S+ 0 0 49 18,-2.7 -1,-0.3 1,-0.4 19,-0.1 0.185 90.5 129.0 91.1 -15.8 8.2 21.2 63.7 60 121 A D < - 0 0 55 -3,-2.1 17,-2.5 17,-0.1 -1,-0.4 -0.355 42.1-157.0 -63.4 150.0 8.0 24.7 62.2 61 122 A T E +E 76 0D 81 15,-0.2 2,-0.3 -3,-0.1 15,-0.2 -0.878 12.8 179.8-124.2 161.6 5.1 26.9 63.4 62 123 A W E -E 75 0D 20 13,-2.0 13,-2.8 -2,-0.3 2,-0.4 -0.990 18.1-136.3-157.3 156.7 3.3 29.8 61.9 63 124 A R E +E 74 0D 175 -2,-0.3 11,-0.2 11,-0.2 9,-0.1 -0.966 30.0 155.2-120.4 144.8 0.4 32.2 62.7 64 125 A R E -E 73 0D 50 9,-2.1 9,-2.7 -2,-0.4 2,-0.2 -0.991 43.2 -98.9-160.2 149.9 -2.4 33.3 60.4 65 126 A P E -E 72 0D 79 0, 0.0 7,-0.2 0, 0.0 2,-0.2 -0.596 47.7-103.0 -75.2 148.1 -5.9 34.6 60.4 66 127 A H > - 0 0 43 5,-2.7 4,-2.4 -2,-0.2 6,-0.0 -0.517 31.3-126.5 -67.9 136.3 -8.6 32.1 59.6 67 128 A E T 4 S+ 0 0 129 1,-0.2 -1,-0.1 -2,-0.2 0, 0.0 0.513 101.5 11.7 -66.1 -22.5 -9.7 32.7 56.0 68 129 A T T 4 S+ 0 0 127 3,-0.1 -1,-0.2 0, 0.0 -2,-0.1 0.494 129.6 53.6-119.8 -26.7 -13.4 33.0 56.8 69 130 A G T 4 S- 0 0 39 2,-0.1 -2,-0.2 1,-0.1 3,-0.1 0.837 81.3-150.0 -79.2 -31.3 -13.4 33.2 60.6 70 131 A G < + 0 0 58 -4,-2.4 2,-0.2 1,-0.3 -3,-0.1 0.325 55.4 121.6 75.8 -13.2 -11.0 36.1 61.1 71 132 A Y S S- 0 0 113 1,-0.1 -5,-2.7 -6,-0.1 -1,-0.3 -0.581 73.0 -96.6 -73.7 149.5 -9.7 34.7 64.5 72 133 A M E -E 65 0D 89 -7,-0.2 18,-3.4 -2,-0.2 2,-0.4 -0.425 37.8-159.5 -71.7 142.3 -6.0 34.0 64.8 73 134 A L E -EF 64 89D 9 -9,-2.7 -9,-2.1 16,-0.3 2,-0.5 -0.952 9.6-152.8-114.4 143.1 -4.7 30.5 64.2 74 135 A E E -EF 63 88D 56 14,-3.2 14,-2.1 -2,-0.4 2,-0.3 -0.969 23.5-169.5-108.5 128.6 -1.3 28.9 65.4 75 136 A d E -EF 62 87D 1 -13,-2.8 -13,-2.0 -2,-0.5 2,-0.3 -0.856 11.5-163.4-121.3 152.6 -0.3 26.1 63.0 76 137 A V E -EF 61 86D 44 10,-2.4 10,-2.1 -2,-0.3 2,-0.6 -0.995 23.2-123.8-136.0 137.7 2.5 23.4 63.2 77 138 A c E + F 0 85D 2 -17,-2.5 -18,-2.7 -2,-0.3 8,-0.3 -0.752 31.1 171.5 -82.2 120.3 3.9 21.2 60.5 78 139 A L E - 0 0 69 6,-2.5 2,-1.2 -2,-0.6 7,-0.2 0.758 14.2-168.1 -96.8 -42.2 3.6 17.5 61.4 79 140 A G E > > + F 0 84D 0 5,-2.6 5,-2.2 1,-0.2 3,-2.1 -0.623 15.9 174.5 91.5 -96.6 4.6 15.8 58.2 80 141 A N T 3 5S- 0 0 90 -2,-1.2 -1,-0.2 1,-0.3 -33,-0.1 0.772 81.4 -67.6 58.7 26.2 3.7 12.1 58.6 81 142 A G T 3 5S+ 0 0 10 -35,-0.2 -53,-0.5 -3,-0.1 -1,-0.3 0.594 134.2 78.5 73.5 12.8 4.8 11.5 55.0 82 143 A K T < 5S- 0 0 105 -3,-2.1 -2,-0.2 -55,-0.1 3,-0.1 0.288 105.9-109.6-133.4 5.5 1.8 13.7 53.8 83 144 A G T 5 + 0 0 16 -37,-0.4 -33,-0.4 1,-0.2 2,-0.2 0.815 60.3 176.7 62.5 29.9 2.9 17.2 54.3 84 145 A E E < +F 79 0D 83 -5,-2.2 -5,-2.6 -35,-0.1 -6,-2.5 -0.439 10.1 175.2 -73.0 140.6 0.3 17.2 57.2 85 146 A W E -F 77 0D 96 -8,-0.3 2,-0.3 -7,-0.2 -8,-0.2 -0.834 17.1-146.2-133.2 171.0 -0.2 20.3 59.4 86 147 A T E -F 76 0D 67 -10,-2.1 -10,-2.4 -2,-0.3 2,-0.3 -0.987 10.4-169.1-137.1 142.1 -2.5 21.3 62.2 87 148 A d E +F 75 0D 39 -2,-0.3 -12,-0.2 -12,-0.2 -24,-0.1 -0.982 4.9 178.8-128.1 149.1 -4.0 24.7 63.2 88 149 A K E -F 74 0D 133 -14,-2.1 -14,-3.2 -2,-0.3 -2,-0.0 -0.977 37.7 -84.8-143.1 154.3 -5.9 25.9 66.3 89 150 A P E F 73 0D 84 0, 0.0 -16,-0.3 0, 0.0 -17,-0.1 -0.236 360.0 360.0 -53.7 138.7 -7.3 29.3 67.4 90 151 A I 0 0 109 -18,-3.4 -17,-0.2 0, 0.0 -18,-0.0 -0.185 360.0 360.0-139.8 360.0 -5.1 31.9 69.3