==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 02-FEB-94 1CHC . COMPND 2 MOLECULE: EQUINE HERPES VIRUS-1 RING DOMAIN; . SOURCE 2 ORGANISM_SCIENTIFIC: EQUID HERPESVIRUS 1; . AUTHOR P.N.BARLOW,R.D.EVERETT,B.LUISI . 68 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5588.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 31 45.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 10.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 14.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 10.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 230 0, 0.0 2,-0.6 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 174.1 67.0 57.3 -36.5 2 2 A A + 0 0 92 2,-0.1 2,-0.6 1,-0.0 0, 0.0 -0.877 360.0 168.7-119.3 96.3 68.5 56.0 -39.8 3 3 A T + 0 0 140 -2,-0.6 2,-0.2 0, 0.0 -1,-0.0 -0.544 37.2 121.0-106.9 63.6 72.2 55.0 -39.3 4 4 A V - 0 0 105 -2,-0.6 -2,-0.1 1,-0.2 0, 0.0 -0.734 68.5 -61.6-120.4 168.9 72.7 53.2 -42.7 5 5 A A - 0 0 44 -2,-0.2 -1,-0.2 1,-0.1 11,-0.0 0.127 33.7-140.3 -44.8 161.3 75.1 53.7 -45.7 6 6 A E - 0 0 85 21,-0.1 -1,-0.1 9,-0.1 6,-0.1 -0.258 24.6-136.7-125.0 44.9 75.0 56.9 -47.8 7 7 A R - 0 0 138 1,-0.2 21,-0.1 2,-0.1 -2,-0.0 0.406 35.4-104.7 -2.2 67.7 75.5 55.3 -51.3 8 8 A C - 0 0 2 1,-0.2 -1,-0.2 19,-0.1 20,-0.1 0.359 18.7-147.7 -10.3 101.1 78.0 57.9 -52.7 9 9 A P S S+ 0 0 51 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 0.435 101.4 44.5 -49.1 -2.7 76.4 60.3 -55.2 10 10 A I S S- 0 0 51 26,-0.0 -2,-0.1 19,-0.0 -3,-0.0 0.765 137.7 -5.9-113.4 -51.9 79.9 60.1 -56.8 11 11 A C - 0 0 62 18,-0.0 -4,-0.1 0, 0.0 -3,-0.0 0.768 68.4-162.2-111.2 -57.1 81.1 56.5 -56.9 12 12 A L + 0 0 86 1,-0.1 -5,-0.1 -6,-0.1 16,-0.0 0.973 41.7 135.8 64.9 60.5 78.5 54.4 -55.0 13 13 A E S S- 0 0 152 1,-0.0 3,-0.2 0, 0.0 -1,-0.1 -0.353 95.7 -64.0-126.4 43.3 80.6 51.3 -54.4 14 14 A D - 0 0 106 1,-0.2 2,-2.0 -6,-0.1 3,-0.2 0.874 55.8-124.8 67.9 104.8 79.4 51.2 -50.8 15 15 A P + 0 0 2 0, 0.0 -1,-0.2 0, 0.0 -9,-0.1 -0.172 45.8 166.5 -84.3 46.4 80.7 54.5 -49.2 16 16 A S + 0 0 93 -2,-2.0 2,-0.1 -3,-0.2 -2,-0.1 0.724 58.0 39.2 -22.4 -69.2 82.5 52.6 -46.3 17 17 A N S S- 0 0 80 -3,-0.2 2,-0.4 13,-0.1 40,-0.1 -0.311 89.5-119.1 -84.6 174.1 84.7 55.4 -45.0 18 18 A Y + 0 0 56 11,-0.2 2,-0.4 -2,-0.1 11,-0.2 -0.972 33.4 170.3-138.4 140.9 83.5 59.0 -44.7 19 19 A S E -A 28 0A 0 9,-2.6 9,-2.7 -2,-0.4 2,-0.6 -0.991 26.7-154.5-129.7 109.8 84.3 62.5 -45.9 20 20 A M E -AB 27 54A 44 34,-2.7 34,-1.8 -2,-0.4 2,-0.6 -0.854 10.2-139.5 -96.5 126.0 81.4 64.8 -44.9 21 21 A A E > -AB 26 53A 0 5,-2.3 5,-1.4 -2,-0.6 3,-0.5 -0.788 40.8-108.7 -87.7 121.4 81.1 67.8 -47.2 22 22 A L T 5S+ 0 0 42 30,-3.2 29,-2.6 -2,-0.6 30,-0.3 -0.588 87.8 19.6-102.0 162.3 80.4 70.8 -44.9 23 23 A P T 5S+ 0 0 95 0, 0.0 -1,-0.3 0, 0.0 30,-0.1 -0.772 133.7 46.2 -80.0 37.4 78.4 72.8 -44.0 24 24 A C T 5S- 0 0 21 -3,-0.5 -2,-0.3 2,-0.1 -3,-0.2 0.067 88.2-151.6-121.8 21.8 76.0 70.2 -45.4 25 25 A L T 5 + 0 0 111 -5,-0.2 2,-0.6 1,-0.1 -3,-0.2 0.519 31.1 162.2 3.2 59.9 77.7 67.2 -43.8 26 26 A H E < -A 21 0A 47 -5,-1.4 -5,-2.3 -7,-0.0 2,-0.9 -0.870 38.0-130.7 -94.0 127.6 76.7 64.7 -46.4 27 27 A A E +A 20 0A 4 -2,-0.6 -7,-0.3 -7,-0.2 2,-0.2 -0.755 33.9 169.9 -96.1 109.5 79.0 61.7 -45.9 28 28 A F E -A 19 0A 1 -9,-2.7 -9,-2.6 -2,-0.9 3,-0.2 -0.475 52.4 -72.2 -97.4 170.4 80.6 60.5 -49.1 29 29 A C S > S- 0 0 24 -11,-0.2 3,-2.0 1,-0.2 4,-0.4 -0.179 87.2 -51.8 -59.9 169.3 83.6 57.9 -49.0 30 30 A Y T 3 S- 0 0 105 1,-0.3 -1,-0.2 -12,-0.2 -11,-0.2 -0.209 119.3 -29.1 -47.3 131.3 86.8 59.4 -47.6 31 31 A V T 3> S+ 0 0 52 -3,-0.2 4,-0.8 1,-0.1 -1,-0.3 0.590 100.8 126.1 25.4 37.9 87.3 62.5 -49.8 32 32 A C H X> S+ 0 0 31 -3,-2.0 3,-1.3 2,-0.2 4,-1.1 0.976 75.8 48.4 -72.8 -64.7 85.5 61.0 -52.9 33 33 A I H 3> S+ 0 0 0 -4,-0.4 4,-2.4 1,-0.3 5,-0.3 0.765 98.1 69.5 -39.8 -42.7 83.1 64.0 -53.1 34 34 A T H 3> S+ 0 0 17 1,-0.2 4,-2.3 2,-0.2 -1,-0.3 0.939 99.4 49.3 -45.8 -54.7 86.1 66.4 -52.9 35 35 A R H X S+ 0 0 88 -4,-1.1 4,-3.2 1,-0.2 3,-1.5 0.961 110.9 44.5 -52.1 -65.1 83.6 65.8 -57.6 37 37 A I H 3< S+ 0 0 23 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.876 101.3 66.6 -50.9 -47.6 83.0 69.4 -56.3 38 38 A R H 3< S+ 0 0 210 -4,-2.3 -1,-0.2 -5,-0.3 -2,-0.2 0.766 121.3 22.0 -45.7 -29.6 86.5 70.7 -57.4 39 39 A Q H << S+ 0 0 147 -3,-1.5 -2,-0.2 -4,-0.8 -1,-0.2 0.775 142.9 26.0-102.9 -45.8 85.2 70.2 -61.0 40 40 A N S < S- 0 0 93 -4,-3.2 -2,-0.2 -5,-0.3 -1,-0.2 -0.747 81.1-176.8-123.3 78.3 81.5 70.3 -60.3 41 41 A P + 0 0 73 0, 0.0 6,-0.1 0, 0.0 -3,-0.1 0.393 50.7 80.0 -53.1-161.2 80.8 72.3 -57.1 42 42 A T S >S- 0 0 68 6,-0.2 5,-0.5 5,-0.1 0, 0.0 0.969 106.2 -83.8 47.6 79.3 77.3 72.8 -55.6 43 43 A C T >5 - 0 0 0 5,-2.2 4,-1.8 3,-0.2 -1,-0.0 0.443 29.6-124.0 -9.8 129.3 77.1 69.4 -53.8 44 44 A P T 45S+ 0 0 24 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.712 113.4 36.0 -58.7 -21.0 76.0 66.4 -56.0 45 45 A L T 45S+ 0 0 90 3,-0.1 -2,-0.1 -19,-0.0 -3,-0.0 0.810 137.4 9.3-102.7 -42.7 73.3 65.9 -53.3 46 46 A C T 45S- 0 0 48 2,-0.1 -3,-0.2 -20,-0.0 -4,-0.1 -0.085 86.6-121.0-137.9 43.9 72.2 69.4 -52.2 47 47 A K << + 0 0 138 -4,-1.8 -5,-0.1 -5,-0.5 -4,-0.1 0.689 57.1 149.9 19.8 57.2 73.8 72.0 -54.5 48 48 A V - 0 0 39 -7,-0.0 2,-2.4 -24,-0.0 -5,-2.2 -0.896 58.5-115.8-111.1 142.9 75.7 73.9 -51.8 49 49 A P - 0 0 113 0, 0.0 -2,-0.0 0, 0.0 -1,-0.0 -0.475 48.9-134.1 -79.2 69.9 79.0 75.7 -52.5 50 50 A V - 0 0 30 -2,-2.4 3,-0.1 1,-0.1 -8,-0.1 0.340 28.0-173.4 -24.6 146.0 81.0 73.4 -50.2 51 51 A E - 0 0 150 -29,-2.6 2,-0.3 1,-0.4 -1,-0.1 0.768 58.3 -4.8-112.4 -65.2 83.5 74.7 -47.7 52 52 A S - 0 0 64 -30,-0.3 -30,-3.2 2,-0.0 2,-0.4 -0.847 51.3-137.9-134.0 169.2 85.3 71.9 -45.9 53 53 A V E -B 21 0A 43 -2,-0.3 2,-0.4 -32,-0.2 -32,-0.2 -0.998 15.2-161.9-130.2 131.9 85.5 68.1 -45.6 54 54 A V E -B 20 0A 59 -34,-1.8 -34,-2.7 -2,-0.4 2,-0.6 -0.933 6.0-154.9-116.0 139.2 85.9 66.3 -42.3 55 55 A H + 0 0 94 -2,-0.4 2,-1.6 -36,-0.2 -36,-0.2 -0.813 16.2 174.0-118.5 87.7 87.0 62.7 -42.2 56 56 A T + 0 0 103 -2,-0.6 2,-0.2 -38,-0.1 -37,-0.1 -0.622 32.2 143.3 -94.6 72.8 85.8 61.2 -38.9 57 57 A I - 0 0 51 -2,-1.6 2,-0.2 -40,-0.1 3,-0.1 -0.563 39.7-125.8-105.8 170.5 87.0 57.7 -39.9 58 58 A E + 0 0 154 -2,-0.2 -1,-0.1 1,-0.2 -41,-0.0 -0.499 65.0 7.7-114.3-176.2 88.5 55.0 -37.6 59 59 A S S S+ 0 0 118 -2,-0.2 2,-0.2 1,-0.1 -1,-0.2 0.537 76.4 154.7 4.2 75.8 91.6 52.8 -37.2 60 60 A D + 0 0 112 -3,-0.1 -1,-0.1 2,-0.0 0, 0.0 -0.714 14.1 123.2-115.4 167.7 93.8 54.1 -40.0 61 61 A S + 0 0 104 -2,-0.2 2,-0.1 0, 0.0 -2,-0.0 0.289 32.5 169.8 137.1 83.1 97.7 54.1 -40.6 62 62 A E + 0 0 150 2,-0.0 -2,-0.0 0, 0.0 0, 0.0 -0.458 35.8 35.2-105.7 179.7 98.8 52.4 -43.8 63 63 A F - 0 0 199 -2,-0.1 3,-0.1 1,-0.0 5,-0.0 0.116 65.4-120.7 64.4 179.1 102.1 52.3 -45.7 64 64 A G S S- 0 0 78 4,-0.4 2,-0.1 1,-0.1 -1,-0.0 0.672 83.7 -9.2-118.2 -59.4 105.7 52.1 -44.3 65 65 A D S S- 0 0 79 3,-1.5 -1,-0.1 0, 0.0 0, 0.0 -0.077 86.7 -86.5-118.4-142.8 107.5 55.2 -45.6 66 66 A Q S S+ 0 0 153 -2,-0.1 -3,-0.0 -3,-0.1 0, 0.0 0.742 116.3 6.4-106.1 -35.3 106.4 57.7 -48.3 67 67 A L 0 0 163 1,-0.1 -4,-0.0 -4,-0.0 0, 0.0 0.720 360.0 360.0-115.3 -44.4 107.7 55.9 -51.5 68 68 A I 0 0 173 -5,-0.0 -3,-1.5 -4,-0.0 -4,-0.4 -0.453 360.0 360.0-113.7 360.0 108.9 52.5 -50.3