==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT(HEME PROTEIN) 01-JUN-94 1CHI . COMPND 2 MOLECULE: CYTOCHROME C; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR T.P.LO,G.D.BRAYER . 108 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6545.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 66 61.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 10.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 32.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -5 A T 0 0 126 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-112.5 4.9 11.3 -7.6 2 -4 A E + 0 0 178 1,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.175 360.0 76.1-157.0 29.6 1.3 11.2 -6.2 3 -3 A F - 0 0 22 94,-0.0 2,-0.3 67,-0.0 64,-0.1 -0.982 62.6-160.4-148.3 141.6 1.6 14.9 -5.6 4 -2 A K - 0 0 144 -2,-0.3 97,-0.1 -3,-0.1 2,-0.1 -0.943 28.6 -99.2-130.7 149.9 1.5 18.0 -8.0 5 -1 A A + 0 0 76 -2,-0.3 93,-0.2 1,-0.1 2,-0.1 -0.338 40.4 177.9 -69.3 140.6 2.7 21.5 -7.6 6 1 A G - 0 0 28 91,-0.6 2,-0.5 92,-0.1 -1,-0.1 -0.289 44.2 -48.0-122.5-158.4 0.3 24.3 -6.6 7 2 A S > - 0 0 51 1,-0.2 4,-2.4 -2,-0.1 95,-0.3 -0.762 35.9-162.3 -83.0 119.3 0.5 28.0 -5.9 8 3 A A H > S+ 0 0 38 -2,-0.5 4,-1.9 2,-0.2 -1,-0.2 0.769 95.3 54.0 -72.5 -24.4 3.3 28.9 -3.5 9 4 A K H > S+ 0 0 181 2,-0.2 4,-1.0 1,-0.2 -1,-0.2 0.939 111.6 42.9 -66.5 -46.5 1.5 32.3 -2.9 10 5 A K H >> S+ 0 0 87 1,-0.2 4,-1.4 2,-0.2 3,-0.8 0.928 113.2 52.9 -61.8 -47.3 -1.7 30.5 -2.0 11 6 A G H 3X S+ 0 0 0 -4,-2.4 4,-2.2 1,-0.3 -1,-0.2 0.877 102.9 59.4 -58.2 -42.5 0.2 28.0 0.1 12 7 A A H 3X S+ 0 0 18 -4,-1.9 4,-1.5 1,-0.3 -1,-0.3 0.774 108.7 43.2 -61.2 -30.6 1.9 30.9 1.9 13 8 A T H S+ 0 0 5 -4,-2.2 4,-3.9 2,-0.2 5,-2.1 0.984 108.7 49.5 -63.6 -58.9 0.3 28.5 6.4 16 11 A K H <5S+ 0 0 124 -4,-1.5 5,-0.4 1,-0.3 -2,-0.2 0.963 118.5 41.5 -49.4 -53.0 -0.2 31.8 8.1 17 12 A T H <5S+ 0 0 119 -4,-1.9 -1,-0.3 1,-0.2 -2,-0.2 0.759 134.7 17.5 -64.8 -28.8 -3.9 30.8 8.6 18 13 A R H <5S+ 0 0 74 -4,-2.5 -3,-0.2 -3,-0.5 -2,-0.2 0.612 133.1 24.1-117.3 -28.1 -3.1 27.2 9.6 19 14 A C T >X5S+ 0 0 22 -4,-3.9 3,-3.4 -5,-0.4 4,-1.0 0.757 100.0 77.0-109.6 -42.3 0.4 26.5 10.6 20 15 A L T 34 S- 0 0 99 1,-0.1 3,-2.7 12,-0.1 2,-0.5 -0.326 78.6-108.4 -73.2 141.1 12.9 30.5 8.4 27 22 A K T 3 S+ 0 0 166 1,-0.3 -1,-0.1 -2,-0.1 -2,-0.1 -0.492 115.3 19.9 -69.9 118.0 16.5 29.4 8.9 28 23 A G T 3 S+ 0 0 77 -2,-0.5 -1,-0.3 1,-0.4 -2,-0.1 0.487 95.0 136.3 98.2 8.5 17.2 30.8 12.4 29 24 A G < - 0 0 13 -3,-2.7 -1,-0.4 1,-0.1 2,-0.2 -0.625 56.5-109.0 -83.2 150.4 13.5 31.0 13.2 30 25 A P - 0 0 75 0, 0.0 -4,-0.1 0, 0.0 -1,-0.1 -0.493 20.2-111.3 -83.1 151.8 12.6 29.7 16.7 31 26 A H + 0 0 65 -2,-0.2 2,-0.2 4,-0.1 -8,-0.1 -0.401 45.0 169.0 -68.6 162.4 10.8 26.5 17.7 32 27 A K - 0 0 92 2,-3.9 -10,-0.1 -10,-0.4 -1,-0.1 -0.299 65.9 -35.1-143.2-135.9 7.4 27.4 19.2 33 28 A V S S+ 0 0 103 -12,-0.3 -10,-0.1 -2,-0.2 -11,-0.1 0.958 144.3 33.9 -58.9 -44.9 4.5 25.2 20.0 34 29 A G S S- 0 0 6 -12,-2.2 -2,-3.9 -15,-0.1 2,-0.1 -0.643 106.0 -95.4-103.8 165.9 5.7 23.3 17.0 35 30 A P - 0 0 17 0, 0.0 -11,-0.5 0, 0.0 -4,-0.1 -0.331 44.8 -96.9 -73.1 156.0 9.4 23.0 15.9 36 31 A N - 0 0 15 -7,-0.2 -11,-0.2 -13,-0.2 -5,-0.1 -0.510 34.3-150.0 -69.2 153.9 10.9 25.4 13.3 37 32 A L > + 0 0 24 -13,-2.7 3,-1.6 -3,-0.1 -12,-0.2 0.196 42.9 139.7-108.0 6.0 10.6 23.6 10.0 38 33 A H T 3 S+ 0 0 44 -12,-0.3 70,-0.2 1,-0.3 69,-0.1 -0.338 80.7 10.9 -52.9 136.1 13.6 25.0 8.1 39 34 A G T 3 S+ 0 0 33 68,-3.9 -1,-0.3 -14,-0.2 4,-0.1 0.711 83.1 144.3 68.8 29.8 15.2 22.1 6.2 40 35 A I X + 0 0 12 -3,-1.6 3,-1.1 67,-0.1 24,-0.5 0.804 42.2 85.4 -67.8 -35.1 12.4 19.6 6.8 41 36 A F T 3 S+ 0 0 54 1,-0.3 24,-0.2 62,-0.1 3,-0.1 -0.453 101.4 14.0 -75.7 135.0 12.5 17.7 3.4 42 37 A G T 3 S+ 0 0 56 22,-3.1 2,-0.3 1,-0.3 -1,-0.3 0.288 109.4 105.0 83.2 -17.1 14.9 14.8 3.1 43 38 A R S < S- 0 0 62 -3,-1.1 21,-2.6 21,-0.3 -1,-0.3 -0.723 73.9-115.9 -97.1 151.3 15.3 15.1 7.0 44 39 A H B > -A 63 0A 66 -2,-0.3 3,-0.8 19,-0.2 19,-0.3 -0.600 35.6 -92.0 -87.8 146.1 13.6 12.5 9.3 45 40 A S T 3 S+ 0 0 3 17,-2.6 16,-0.2 -2,-0.2 -1,-0.1 -0.222 106.2 26.4 -52.4 137.9 10.9 13.3 11.9 46 41 A G T 3 S+ 0 0 16 15,-0.1 -1,-0.2 -3,-0.1 7,-0.2 0.616 87.4 105.5 82.3 18.8 12.1 14.2 15.4 47 42 A Q < + 0 0 118 -3,-0.8 -2,-0.1 2,-0.1 2,-0.1 0.575 34.6 116.2-107.8 -12.5 15.6 15.6 14.6 48 43 A A S > S- 0 0 18 1,-0.1 3,-1.0 -12,-0.1 2,-0.4 -0.461 70.2-121.7 -57.7 135.6 15.3 19.3 15.0 49 44 A E T 3 S+ 0 0 182 1,-0.2 3,-0.1 -2,-0.1 -1,-0.1 -0.678 90.9 26.9 -91.1 136.7 17.7 20.0 17.9 50 45 A G T 3 S+ 0 0 77 -2,-0.4 2,-0.4 1,-0.3 -1,-0.2 0.373 95.8 120.1 96.7 2.5 16.3 21.7 21.0 51 46 A Y < - 0 0 47 -3,-1.0 2,-1.0 -5,-0.1 -1,-0.3 -0.875 57.9-142.4-107.3 137.1 12.8 20.4 20.4 52 47 A S - 0 0 90 -2,-0.4 2,-0.1 -3,-0.1 -3,-0.1 -0.755 29.0-178.8 -93.6 95.4 10.9 18.1 22.6 53 48 A Y - 0 0 37 -2,-1.0 30,-0.0 -7,-0.2 2,-0.0 -0.437 30.3-100.4 -94.9 165.4 8.9 15.6 20.5 54 49 A T > - 0 0 28 -2,-0.1 4,-1.2 1,-0.1 -1,-0.1 -0.308 34.6-110.3 -74.4 168.5 6.5 12.9 21.5 55 50 A D H > S+ 0 0 137 1,-0.2 4,-2.1 2,-0.2 5,-0.1 0.814 118.5 63.4 -66.9 -30.7 7.8 9.3 21.6 56 51 A A H > S+ 0 0 24 26,-0.3 4,-1.1 2,-0.2 -1,-0.2 0.826 98.8 45.1 -56.4 -54.0 5.5 9.0 18.6 57 52 A N H >>S+ 0 0 17 2,-0.2 4,-0.7 25,-0.2 5,-0.6 0.881 114.5 51.7 -63.3 -44.0 7.1 11.4 16.1 58 53 A I H ><5S+ 0 0 82 -4,-1.2 3,-1.2 1,-0.2 -2,-0.2 0.947 108.7 48.6 -58.2 -55.6 10.5 10.0 16.9 59 54 A K H 3<5S+ 0 0 168 -4,-2.1 -1,-0.2 1,-0.3 -2,-0.2 0.711 100.0 64.1 -60.3 -28.9 9.6 6.3 16.4 60 55 A K H 3<5S- 0 0 93 -4,-1.1 -1,-0.3 -3,-0.2 -2,-0.2 0.784 83.3-159.6 -64.4 -31.4 7.9 6.8 13.0 61 56 A N T <<5 - 0 0 80 -3,-1.2 -3,-0.1 -4,-0.7 -2,-0.1 0.854 18.3-170.9 47.6 40.2 11.3 7.8 11.7 62 57 A V < - 0 0 6 -5,-0.6 -17,-2.6 -18,-0.1 2,-0.6 -0.303 19.6-144.9 -59.9 140.7 9.4 9.5 8.9 63 58 A L B -A 44 0A 82 -19,-0.3 2,-0.8 -3,-0.1 -19,-0.2 -0.974 27.8-127.8-106.1 112.8 11.7 10.8 6.1 64 59 A W + 0 0 9 -21,-2.6 -22,-3.1 -2,-0.6 -21,-0.3 -0.644 42.6 155.3 -78.8 112.0 9.9 14.0 5.0 65 60 A D > - 0 0 63 -2,-0.8 4,-2.9 -24,-0.2 3,-0.4 -0.844 59.2-100.2-127.1 158.9 9.2 14.3 1.3 66 61 A E H > S+ 0 0 63 -2,-0.3 4,-0.7 1,-0.2 34,-0.1 0.803 126.2 46.2 -42.0 -41.0 6.5 16.3 -0.6 67 62 A N H > S+ 0 0 46 2,-0.2 4,-1.3 1,-0.2 3,-0.3 0.862 111.5 47.4 -71.6 -48.3 4.6 13.0 -0.8 68 63 A N H > S+ 0 0 33 -3,-0.4 4,-2.6 1,-0.2 -2,-0.2 0.881 109.8 56.9 -57.5 -45.4 5.0 11.9 2.8 69 64 A M H X S+ 0 0 11 -4,-2.9 4,-2.4 1,-0.2 -1,-0.2 0.764 100.8 56.5 -59.6 -35.8 4.0 15.3 3.8 70 65 A S H X S+ 0 0 11 -4,-0.7 4,-0.7 -3,-0.3 -1,-0.2 0.900 108.9 44.8 -68.2 -46.3 0.7 15.2 1.9 71 66 A E H >X S+ 0 0 115 -4,-1.3 3,-1.3 2,-0.2 4,-1.0 0.960 114.7 49.4 -63.6 -46.9 -0.5 12.0 3.7 72 67 A Y H >< S+ 0 0 18 -4,-2.6 3,-1.3 1,-0.3 7,-0.2 0.960 107.9 54.1 -56.3 -53.6 0.5 13.4 7.1 73 68 A L H 3< S+ 0 0 12 -4,-2.4 17,-2.9 1,-0.3 -1,-0.3 0.639 99.5 63.5 -56.8 -17.8 -1.2 16.7 6.4 74 69 A T H << S- 0 0 45 -3,-1.3 -1,-0.3 -4,-0.7 -2,-0.2 0.839 134.8 -15.3 -72.3 -41.0 -4.5 14.8 5.7 75 70 A N S+ 0 0 0 0, 0.0 4,-3.0 0, 0.0 7,-0.1 0.956 88.4 51.8 -53.7 -54.8 -1.4 13.8 11.2 77 72 A X H 4 S+ 0 0 147 10,-0.4 6,-0.1 2,-0.2 5,-0.1 0.715 109.4 48.4 -54.9 -31.0 -2.9 11.8 14.2 78 73 A K H 4 S+ 0 0 172 -3,-0.4 -1,-0.2 -6,-0.2 -6,-0.1 0.983 117.6 42.9 -72.9 -51.4 -4.0 8.9 11.9 79 74 A Y H < S+ 0 0 48 -4,-2.3 -2,-0.2 1,-0.3 -1,-0.1 0.730 133.8 18.3 -59.6 -39.1 -0.6 8.8 10.3 80 75 A I S >< S- 0 0 3 -4,-3.0 3,-1.7 -5,-0.2 -1,-0.3 -0.653 85.5-159.3-138.3 76.4 1.5 9.2 13.5 81 76 A P T 3 S+ 0 0 99 0, 0.0 -3,-0.1 0, 0.0 3,-0.1 -0.422 78.9 34.0 -64.8 134.6 -0.9 8.3 16.3 82 77 A G T 3 S+ 0 0 54 1,-0.5 -26,-0.3 -2,-0.1 -25,-0.2 0.276 84.6 138.6 99.5 -4.6 0.1 9.7 19.6 83 78 A T < - 0 0 7 -3,-1.7 -1,-0.5 -27,-0.2 -3,-0.1 -0.551 50.8-144.5 -68.7 146.1 1.6 12.8 17.9 84 79 A K + 0 0 105 -2,-0.1 2,-0.7 -3,-0.1 -1,-0.1 0.200 61.1 121.7 -97.1 8.2 0.8 16.0 19.9 85 80 A M - 0 0 42 1,-0.1 2,-1.0 2,-0.0 -8,-0.2 -0.722 53.3-155.7 -76.3 118.8 0.3 18.2 16.8 86 81 A A + 0 0 90 -2,-0.7 2,-0.5 -10,-0.1 -1,-0.1 -0.542 47.4 124.4 -92.2 57.9 -3.2 19.4 17.3 87 82 A Y - 0 0 59 -2,-1.0 -10,-0.4 1,-0.1 3,-0.1 -0.989 54.7-145.6-121.1 134.2 -4.1 20.1 13.7 88 83 A G - 0 0 53 -2,-0.5 2,-0.2 1,-0.2 -1,-0.1 0.815 50.8-101.4 -61.9 -43.8 -7.2 18.3 12.3 89 84 A G - 0 0 12 -14,-0.1 2,-0.8 -13,-0.1 -15,-0.3 -0.458 19.3 -92.4 133.5 161.8 -5.9 17.9 8.7 90 85 A A - 0 0 4 -17,-2.9 6,-0.1 -20,-0.2 -15,-0.1 -0.899 37.0-177.7-108.8 87.3 -6.0 19.3 5.1 91 86 A K + 0 0 112 -2,-0.8 2,-0.6 1,-0.1 -1,-0.2 0.810 60.2 83.0 -59.1 -36.5 -8.8 17.2 3.7 92 87 A K > - 0 0 127 1,-0.1 4,-2.3 -3,-0.1 3,-0.4 -0.709 65.7-155.5 -86.5 114.2 -8.3 19.0 0.4 93 88 A E H > S+ 0 0 113 -2,-0.6 4,-2.8 1,-0.3 5,-0.2 0.865 98.3 52.5 -48.8 -46.8 -5.7 17.8 -2.0 94 89 A K H > S+ 0 0 145 1,-0.2 4,-2.0 2,-0.2 -1,-0.3 0.875 108.4 52.5 -63.6 -38.0 -5.5 21.2 -3.7 95 90 A D H > S+ 0 0 26 -3,-0.4 4,-2.6 2,-0.2 -2,-0.2 0.955 111.9 44.6 -59.6 -54.1 -5.0 22.8 -0.3 96 91 A R H X S+ 0 0 25 -4,-2.3 4,-3.2 2,-0.2 5,-0.4 0.907 109.8 54.6 -57.7 -47.7 -2.1 20.5 0.6 97 92 A N H X S+ 0 0 15 -4,-2.8 4,-3.2 2,-0.2 -91,-0.6 0.964 110.2 47.9 -50.7 -54.2 -0.4 20.9 -2.8 98 93 A D H X S+ 0 0 17 -4,-2.0 4,-3.3 -5,-0.2 -87,-0.2 0.972 113.9 47.6 -51.2 -54.7 -0.4 24.6 -2.3 99 94 A L H X S+ 0 0 8 -4,-2.6 4,-3.0 1,-0.2 -2,-0.2 0.855 113.5 44.1 -56.4 -49.3 0.9 24.2 1.2 100 95 A I H X S+ 0 0 0 -4,-3.2 4,-4.0 2,-0.3 -1,-0.2 0.766 111.6 55.6 -69.6 -28.9 3.8 21.7 0.3 101 96 A T H X S+ 0 0 8 -4,-3.2 4,-2.1 -5,-0.4 -2,-0.2 0.973 111.3 45.6 -62.1 -48.0 4.5 24.0 -2.7 102 97 A Y H X S+ 0 0 42 -4,-3.3 4,-2.3 -95,-0.3 -2,-0.3 0.956 118.8 39.6 -56.6 -56.4 4.8 26.7 -0.1 103 98 A L H X S+ 0 0 8 -4,-3.0 4,-2.5 2,-0.2 5,-0.3 0.957 108.2 62.0 -58.6 -54.1 6.9 24.6 2.3 104 99 A K H < S+ 0 0 73 -4,-4.0 -1,-0.2 1,-0.3 -2,-0.2 0.867 114.3 37.0 -32.5 -56.2 9.0 23.0 -0.5 105 100 A K H < S+ 0 0 144 -4,-2.1 3,-0.4 -5,-0.2 -1,-0.3 0.820 120.8 37.4 -74.1 -42.4 10.1 26.5 -1.4 106 101 A A H < S+ 0 0 38 -4,-2.3 -2,-0.2 1,-0.2 -1,-0.2 0.531 104.3 64.5 -95.2 -8.5 10.6 28.4 1.9 107 102 A T < 0 0 2 -4,-2.5 -68,-3.9 -5,-0.2 -1,-0.2 0.389 360.0 360.0 -88.0 2.8 12.0 25.7 4.2 108 103 A E 0 0 177 -3,-0.4 -1,-0.2 -5,-0.3 -2,-0.2 0.804 360.0 360.0 -88.5 360.0 15.0 25.7 1.8