==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT(HEME PROTEIN) 01-JUN-94 1CHJ . COMPND 2 MOLECULE: CYTOCHROME C; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR T.P.LO,G.D.BRAYER . 108 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6554.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 63 58.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 11.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 32.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -5 A T 0 0 128 0, 0.0 3,-0.0 0, 0.0 65,-0.0 0.000 360.0 360.0 360.0 -66.4 4.6 11.0 -7.4 2 -4 A E + 0 0 156 2,-0.0 2,-0.4 0, 0.0 0, 0.0 -0.240 360.0 92.5-136.1 31.5 1.0 11.6 -6.4 3 -3 A F - 0 0 23 94,-0.0 2,-0.4 97,-0.0 64,-0.1 -0.992 58.2-164.3-132.4 126.4 1.8 15.2 -5.4 4 -2 A K - 0 0 161 -2,-0.4 97,-0.1 1,-0.0 -2,-0.0 -0.893 27.6-103.5-119.8 142.1 1.4 18.0 -7.9 5 -1 A A + 0 0 84 -2,-0.4 2,-0.2 1,-0.1 93,-0.2 -0.245 46.3 173.7 -62.1 143.5 2.8 21.6 -7.7 6 1 A G - 0 0 29 91,-0.5 2,-0.4 92,-0.2 -1,-0.1 -0.591 40.1 -40.0-134.6-163.1 0.4 24.3 -6.7 7 2 A S > - 0 0 53 -2,-0.2 4,-1.9 1,-0.2 95,-0.3 -0.601 36.9-164.2 -76.8 123.1 0.3 27.9 -5.8 8 3 A A H > S+ 0 0 26 -2,-0.4 4,-2.3 2,-0.2 -1,-0.2 0.846 95.3 44.6 -72.9 -41.3 3.2 29.2 -3.7 9 4 A K H > S+ 0 0 177 2,-0.2 4,-1.5 1,-0.2 -1,-0.2 0.898 113.2 51.2 -69.2 -38.7 1.4 32.4 -2.8 10 5 A K H > S+ 0 0 82 1,-0.2 4,-1.7 2,-0.2 -2,-0.2 0.906 112.9 46.5 -62.1 -44.3 -1.9 30.4 -2.1 11 6 A G H X S+ 0 0 0 -4,-1.9 4,-2.4 87,-0.3 -2,-0.2 0.867 104.0 61.5 -65.6 -40.1 0.1 28.0 0.1 12 7 A A H X S+ 0 0 19 -4,-2.3 4,-1.7 1,-0.2 -1,-0.2 0.876 108.9 43.3 -56.6 -41.8 1.9 30.9 1.9 13 8 A T H X S+ 0 0 71 -4,-1.5 4,-2.5 2,-0.2 -1,-0.2 0.810 108.8 55.8 -73.1 -34.0 -1.6 32.1 3.1 14 9 A L H X S+ 0 0 12 -4,-1.7 4,-2.1 1,-0.2 5,-0.3 0.905 108.4 50.9 -62.0 -41.3 -2.8 28.6 4.0 15 10 A F H X>S+ 0 0 6 -4,-2.4 4,-3.2 2,-0.2 5,-2.3 0.944 108.3 50.8 -58.8 -50.5 0.3 28.4 6.3 16 11 A K H <5S+ 0 0 124 -4,-1.7 -1,-0.2 1,-0.2 -2,-0.2 0.921 117.4 39.4 -55.1 -47.3 -0.5 31.7 7.9 17 12 A T H <5S+ 0 0 114 -4,-2.5 -1,-0.2 1,-0.1 -2,-0.2 0.665 132.7 20.2 -81.3 -20.3 -4.1 30.7 8.7 18 13 A R H <5S+ 0 0 89 -4,-2.1 -3,-0.2 -3,-0.2 -2,-0.2 0.471 133.5 24.9-124.3 -13.2 -3.5 27.0 9.7 19 14 A C T >X5S+ 0 0 25 -4,-3.2 4,-1.4 -5,-0.3 3,-1.3 0.675 97.6 75.2-124.2 -33.2 0.2 26.6 10.6 20 15 A L T 34 S- 0 0 92 1,-0.1 3,-1.6 2,-0.1 2,-0.4 -0.235 77.2-105.8 -65.1 151.2 12.7 30.7 8.6 27 22 A K T 3 S+ 0 0 174 1,-0.3 -1,-0.1 10,-0.1 -2,-0.1 -0.645 115.5 25.1 -69.3 122.6 16.3 29.7 9.1 28 23 A G T 3 S+ 0 0 82 -2,-0.4 -1,-0.3 1,-0.4 -2,-0.1 0.527 96.7 143.1 93.0 5.6 17.2 31.0 12.6 29 24 A G < - 0 0 17 -3,-1.6 -1,-0.4 -4,-0.1 2,-0.2 -0.539 48.1-118.4 -82.8 152.7 13.5 30.8 13.4 30 25 A P - 0 0 77 0, 0.0 -6,-0.1 0, 0.0 -4,-0.1 -0.599 17.8-110.8 -94.2 151.4 12.4 29.7 16.9 31 26 A H + 0 0 62 -2,-0.2 2,-0.2 5,-0.1 -8,-0.1 -0.404 40.1 167.8 -71.0 159.3 10.4 26.7 18.0 32 27 A K S S- 0 0 89 2,-3.2 -10,-0.1 -10,-0.4 -9,-0.1 -0.217 72.2 -37.3-138.9-131.1 6.9 27.6 19.4 33 28 A V S S+ 0 0 101 -12,-0.3 -10,-0.1 -2,-0.2 -11,-0.1 0.973 141.9 42.5 -59.6 -50.6 4.2 25.0 20.1 34 29 A G S S- 0 0 6 -12,-2.6 -2,-3.2 -15,-0.1 -10,-0.1 -0.501 103.1 -99.2 -91.0 156.5 5.6 23.4 17.0 35 30 A P - 0 0 17 0, 0.0 -11,-0.3 0, 0.0 2,-0.1 -0.429 46.5 -90.2 -72.4 160.7 9.2 23.0 16.1 36 31 A N - 0 0 17 -7,-0.2 -11,-0.2 -13,-0.2 -5,-0.1 -0.496 37.7-149.8 -65.8 138.8 10.9 25.4 13.6 37 32 A L > + 0 0 27 -13,-3.4 3,-1.6 -2,-0.1 -12,-0.2 0.327 46.9 132.1 -96.8 7.6 10.4 23.8 10.2 38 33 A H T 3 S+ 0 0 38 -12,-0.4 70,-0.2 1,-0.3 69,-0.1 -0.362 79.9 10.2 -61.9 141.7 13.5 25.0 8.3 39 34 A G T 3 S+ 0 0 33 68,-2.9 -1,-0.3 -14,-0.1 4,-0.2 0.615 86.3 140.1 64.4 28.0 15.3 22.2 6.5 40 35 A I X + 0 0 10 -3,-1.6 3,-1.7 67,-0.2 24,-0.5 0.820 40.3 85.1 -62.7 -45.7 12.4 19.7 7.0 41 36 A F T 3 S+ 0 0 37 1,-0.3 24,-0.2 -4,-0.2 3,-0.1 -0.559 103.6 15.5 -63.5 119.6 12.3 17.9 3.7 42 37 A G T 3 S+ 0 0 50 22,-3.7 -1,-0.3 1,-0.5 2,-0.2 0.142 104.5 105.8 99.5 -16.8 14.8 15.0 3.7 43 38 A R S < S- 0 0 67 -3,-1.7 21,-2.7 -4,-0.2 -1,-0.5 -0.490 73.7-117.7 -88.0 160.5 15.2 15.2 7.6 44 39 A H B > -A 63 0A 68 19,-0.2 3,-0.6 -2,-0.2 19,-0.3 -0.747 41.2 -80.8-100.2 158.0 13.6 12.4 9.6 45 40 A S T 3 S+ 0 0 1 17,-2.1 -1,-0.1 -2,-0.3 16,-0.0 -0.063 107.3 16.7 -51.6 143.9 10.8 13.1 12.1 46 41 A G T 3 S+ 0 0 14 1,-0.1 -1,-0.2 -3,-0.1 7,-0.1 0.783 86.7 113.4 59.0 41.0 11.8 14.4 15.6 47 42 A Q < + 0 0 120 -3,-0.6 2,-0.2 2,-0.1 -2,-0.1 0.397 31.9 118.5-118.7 1.2 15.3 15.6 15.0 48 43 A A > - 0 0 17 1,-0.1 3,-0.9 2,-0.0 2,-0.4 -0.508 68.5-117.0 -68.4 140.8 15.2 19.4 15.4 49 44 A E T 3 S+ 0 0 185 1,-0.2 3,-0.1 -2,-0.2 -1,-0.1 -0.600 89.7 19.1 -90.6 133.9 17.5 20.2 18.3 50 45 A G T 3 S+ 0 0 83 -2,-0.4 2,-0.4 1,-0.3 -1,-0.2 0.683 96.8 117.7 90.4 17.1 16.2 21.8 21.5 51 46 A Y < - 0 0 42 -3,-0.9 2,-1.2 -5,-0.1 -1,-0.3 -0.974 62.3-134.5-121.3 135.8 12.7 20.7 20.8 52 47 A S - 0 0 93 -2,-0.4 2,-0.1 -3,-0.1 -3,-0.1 -0.600 30.8-177.5 -88.9 86.5 10.6 18.4 23.0 53 48 A Y - 0 0 39 -2,-1.2 30,-0.0 -5,-0.2 -2,-0.0 -0.374 28.1-104.9 -82.5 161.8 8.9 15.8 20.7 54 49 A T > - 0 0 29 1,-0.1 4,-1.5 -2,-0.1 -1,-0.1 -0.275 30.0-112.7 -72.9 171.9 6.4 13.0 21.7 55 50 A D H > S+ 0 0 132 1,-0.2 4,-1.9 2,-0.2 -1,-0.1 0.841 117.7 61.1 -70.2 -38.9 7.6 9.4 21.8 56 51 A A H > S+ 0 0 24 26,-0.2 4,-0.5 2,-0.2 -1,-0.2 0.878 104.0 45.7 -51.6 -51.8 5.2 8.9 18.8 57 52 A N H >> S+ 0 0 16 1,-0.2 3,-1.3 2,-0.2 4,-1.2 0.932 112.3 49.8 -62.8 -53.8 6.9 11.4 16.5 58 53 A I H 3< S+ 0 0 85 -4,-1.5 -1,-0.2 1,-0.3 -2,-0.2 0.840 110.4 49.5 -48.9 -51.7 10.5 10.1 17.2 59 54 A K H 3< S+ 0 0 159 -4,-1.9 -1,-0.3 1,-0.2 -2,-0.2 0.430 99.0 64.2 -71.7 -13.3 9.7 6.5 16.7 60 55 A K H << S- 0 0 95 -3,-1.3 -1,-0.2 -4,-0.5 -2,-0.2 0.908 81.7-163.7 -77.3 -43.8 7.9 7.0 13.3 61 56 A N < - 0 0 83 -4,-1.2 2,-0.3 1,-0.2 -3,-0.1 0.965 16.4-169.6 54.5 53.3 11.3 8.2 12.0 62 57 A V - 0 0 7 -5,-0.4 -17,-2.1 6,-0.0 2,-0.7 -0.565 19.9-140.0 -74.5 130.5 9.4 9.7 9.0 63 58 A L B -A 44 0A 70 -2,-0.3 2,-0.5 -19,-0.3 -19,-0.2 -0.907 24.2-132.2 -97.6 114.7 11.6 11.0 6.2 64 59 A W + 0 0 13 -21,-2.7 -22,-3.7 -2,-0.7 2,-0.3 -0.673 44.5 147.1 -79.0 124.2 9.9 14.2 5.1 65 60 A D >> - 0 0 56 -2,-0.5 4,-2.0 -24,-0.2 3,-1.0 -0.894 65.1 -96.7-150.1 145.5 9.4 14.4 1.3 66 61 A E H 3> S+ 0 0 64 -2,-0.3 4,-0.8 1,-0.3 34,-0.1 0.711 123.7 56.7 -38.2 -34.3 6.5 16.1 -0.4 67 62 A N H 3> S+ 0 0 37 2,-0.2 4,-1.2 1,-0.2 3,-0.3 0.944 109.8 38.4 -66.2 -56.7 4.8 12.8 -0.7 68 63 A N H <> S+ 0 0 38 -3,-1.0 4,-3.0 1,-0.2 5,-0.2 0.819 111.5 59.5 -59.0 -42.9 4.8 11.8 3.1 69 64 A M H X S+ 0 0 15 -4,-2.0 4,-1.7 1,-0.2 -1,-0.2 0.791 103.3 53.8 -62.0 -30.6 4.0 15.3 4.1 70 65 A S H X S+ 0 0 10 -4,-0.8 4,-0.8 -5,-0.3 -2,-0.2 0.883 109.3 46.8 -74.5 -36.2 0.9 15.0 2.0 71 66 A E H >X S+ 0 0 101 -4,-1.2 3,-1.6 1,-0.2 4,-0.8 0.993 115.6 45.3 -63.3 -56.7 -0.2 11.9 3.8 72 67 A Y H >< S+ 0 0 21 -4,-3.0 3,-0.5 1,-0.3 -1,-0.2 0.787 105.9 61.0 -54.1 -37.4 0.5 13.4 7.2 73 68 A L H 3< S+ 0 0 14 -4,-1.7 17,-2.5 1,-0.2 -1,-0.3 0.687 97.8 59.6 -71.9 -16.4 -1.2 16.6 6.2 74 69 A T H << S- 0 0 50 -3,-1.6 -1,-0.2 -4,-0.8 -2,-0.2 0.786 133.4 -12.1 -75.9 -35.0 -4.5 14.8 5.7 75 70 A N S+ 0 0 0 0, 0.0 4,-3.8 0, 0.0 7,-0.1 0.934 87.6 50.7 -54.8 -52.1 -1.7 13.8 11.5 77 72 A X H 4 S+ 0 0 158 10,-0.4 5,-0.1 2,-0.2 6,-0.1 0.731 112.1 46.5 -60.8 -27.3 -3.0 11.6 14.3 78 73 A K H 4 S+ 0 0 163 -3,-0.4 -1,-0.2 -6,-0.1 -6,-0.1 0.848 117.8 44.9 -82.6 -33.0 -4.0 8.7 12.0 79 74 A Y H < S+ 0 0 53 -4,-2.1 -2,-0.2 1,-0.3 -1,-0.1 0.923 132.9 17.7 -74.1 -47.9 -0.6 9.1 10.4 80 75 A I S >< S- 0 0 3 -4,-3.8 3,-1.7 -5,-0.2 -1,-0.3 -0.817 84.7-153.1-129.2 86.1 1.4 9.3 13.7 81 76 A P T 3 S+ 0 0 89 0, 0.0 -3,-0.1 0, 0.0 -4,-0.1 -0.385 80.9 29.6 -58.5 131.8 -0.9 8.0 16.5 82 77 A G T 3 S+ 0 0 63 1,-0.3 -26,-0.2 -5,-0.1 -27,-0.2 0.224 84.7 139.9 102.0 -14.9 0.1 9.7 19.7 83 78 A T < - 0 0 10 -3,-1.7 -1,-0.3 -7,-0.1 -6,-0.1 -0.298 50.8-141.3 -65.5 146.5 1.4 13.0 18.3 84 79 A K + 0 0 103 2,-0.1 2,-0.3 -2,-0.0 -1,-0.1 0.570 63.3 120.2 -89.1 -2.4 0.6 16.3 20.1 85 80 A M - 0 0 42 1,-0.1 2,-1.3 -9,-0.0 -8,-0.2 -0.448 52.1-157.9 -63.3 116.5 0.1 18.2 16.9 86 81 A A + 0 0 85 -2,-0.3 2,-0.5 -10,-0.1 -1,-0.1 -0.645 43.7 131.5 -96.5 75.5 -3.5 19.4 17.3 87 82 A F - 0 0 41 -2,-1.3 -10,-0.4 1,-0.2 3,-0.1 -0.992 50.0-150.4-123.1 123.8 -4.2 20.0 13.6 88 83 A G - 0 0 67 -2,-0.5 2,-0.2 1,-0.2 -1,-0.2 0.906 51.1-107.1 -61.1 -40.7 -7.5 18.5 12.4 89 84 A G - 0 0 23 -14,-0.1 2,-0.6 -3,-0.1 -15,-0.2 -0.602 13.2 -94.9 131.9 161.3 -6.1 18.0 8.9 90 85 A A + 0 0 1 -17,-2.5 6,-0.1 -2,-0.2 -15,-0.1 -0.939 32.9 179.7-113.4 91.8 -6.2 19.3 5.3 91 86 A K + 0 0 192 -2,-0.6 2,-0.5 4,-0.0 -1,-0.1 0.696 57.6 90.9 -71.1 -20.8 -8.7 17.0 3.5 92 87 A K > - 0 0 109 1,-0.2 4,-2.6 -3,-0.1 5,-0.2 -0.711 61.9-158.4 -85.9 119.8 -8.2 18.9 0.2 93 88 A E H > S+ 0 0 117 -2,-0.5 4,-3.4 1,-0.2 5,-0.3 0.956 98.2 51.9 -59.6 -45.8 -5.6 17.7 -2.2 94 89 A K H > S+ 0 0 131 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.900 109.3 50.1 -55.3 -43.9 -5.4 21.2 -3.8 95 90 A D H > S+ 0 0 20 1,-0.2 4,-2.6 2,-0.2 -1,-0.2 0.936 114.0 45.1 -60.1 -48.3 -5.0 22.8 -0.3 96 91 A R H X S+ 0 0 29 -4,-2.6 4,-2.9 2,-0.2 5,-0.4 0.862 110.2 52.8 -64.6 -40.1 -2.2 20.4 0.5 97 92 A N H X S+ 0 0 17 -4,-3.4 4,-2.3 -5,-0.2 -91,-0.5 0.972 111.6 47.9 -60.0 -46.9 -0.4 20.7 -2.9 98 93 A D H X S+ 0 0 19 -4,-2.4 4,-2.9 -5,-0.3 -87,-0.3 0.956 113.9 47.2 -56.7 -50.9 -0.4 24.5 -2.4 99 94 A L H X S+ 0 0 2 -4,-2.6 4,-3.2 1,-0.2 -1,-0.2 0.899 114.2 44.0 -58.0 -52.6 0.9 24.1 1.2 100 95 A I H X S+ 0 0 0 -4,-2.9 4,-3.3 2,-0.2 -1,-0.2 0.778 111.2 55.8 -62.6 -32.9 3.7 21.7 0.4 101 96 A T H X S+ 0 0 10 -4,-2.3 4,-1.6 -5,-0.4 -1,-0.2 0.978 113.2 42.4 -62.0 -48.0 4.6 23.7 -2.7 102 97 A Y H X S+ 0 0 30 -4,-2.9 4,-3.3 -95,-0.3 3,-0.2 0.922 116.2 46.0 -57.1 -55.1 5.0 26.6 -0.2 103 98 A L H X S+ 0 0 8 -4,-3.2 4,-2.7 1,-0.2 5,-0.2 0.951 107.8 59.2 -55.0 -53.9 6.8 24.6 2.4 104 99 A K H < S+ 0 0 93 -4,-3.3 -1,-0.2 1,-0.2 -2,-0.2 0.830 115.2 35.7 -39.1 -47.4 9.1 23.2 -0.3 105 100 A K H >< S+ 0 0 121 -4,-1.6 3,-0.7 -3,-0.2 -1,-0.2 0.906 120.7 41.6 -79.4 -51.0 10.2 26.7 -1.2 106 101 A A H 3< S+ 0 0 31 -4,-3.3 -2,-0.2 1,-0.2 -3,-0.2 0.658 109.1 57.6 -85.3 -8.0 10.3 28.6 2.1 107 102 A T T 3< 0 0 0 -4,-2.7 -68,-2.9 -5,-0.2 -1,-0.2 0.390 360.0 360.0 -95.3 0.5 11.9 25.8 4.3 108 103 A E < 0 0 168 -3,-0.7 -1,-0.1 -5,-0.2 -2,-0.1 0.799 360.0 360.0 -88.2 360.0 15.0 25.5 2.1