==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER IMMUNE SYSTEM 07-APR-99 1CI5 . COMPND 2 MOLECULE: PROTEIN (LYMPHOCYTE FUNCTION-ASSOCIATED ANTIGEN . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR Z.Y.J.SUN,V.DOTSCH,M.KIM,J.LI,E.L.REINHERZ,G.WAGNER . 95 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6307.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 63.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 9 9.5 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 32 33.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 11.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 7.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 165 0, 0.0 86,-0.3 0, 0.0 2,-0.2 0.000 360.0 360.0 360.0 178.0 14.8 -6.4 -4.0 2 2 A S - 0 0 86 84,-0.1 2,-0.3 86,-0.0 86,-0.2 -0.512 360.0-148.9-105.0 174.9 11.0 -7.2 -3.8 3 3 A Q E -a 88 0A 95 84,-1.2 86,-2.8 -2,-0.2 2,-0.4 -0.998 4.4-142.2-147.8 144.3 8.6 -7.6 -0.9 4 4 A Q E -a 89 0A 101 -2,-0.3 2,-0.3 84,-0.2 86,-0.2 -0.862 14.2-157.3-110.1 142.5 5.5 -9.6 -0.1 5 5 A I E -a 90 0A 19 84,-3.7 86,-1.4 -2,-0.4 2,-0.6 -0.839 12.6-132.2-117.5 154.9 2.4 -8.4 1.8 6 6 A Y E +a 91 0A 173 -2,-0.3 2,-0.2 84,-0.2 86,-0.2 -0.920 34.0 166.2-110.4 116.2 -0.3 -10.2 3.7 7 7 A G E -a 92 0A 7 84,-3.3 86,-1.2 -2,-0.6 2,-0.3 -0.702 20.6-149.3-121.9 174.9 -3.9 -9.2 3.0 8 8 A V E > -a 93 0A 48 84,-0.3 3,-1.8 -2,-0.2 59,-0.6 -0.996 35.1 -89.0-148.1 140.3 -7.4 -10.5 3.6 9 9 A K B 3 S+f 67 0B 122 84,-2.7 59,-0.2 -2,-0.3 3,-0.1 -0.130 116.1 11.7 -47.0 135.9 -10.7 -10.3 1.7 10 10 A Y T 3 S+ 0 0 184 57,-1.8 -1,-0.3 1,-0.2 2,-0.2 0.739 115.2 109.1 64.0 22.3 -12.7 -7.2 2.8 11 11 A G < - 0 0 10 -3,-1.8 55,-0.8 54,-0.1 56,-0.5 -0.552 65.7-111.6-118.6-175.4 -9.5 -6.1 4.6 12 12 A N E +G 65 0C 108 53,-0.2 2,-0.3 -2,-0.2 53,-0.2 -0.824 27.2 175.1-119.7 159.4 -6.9 -3.4 4.2 13 13 A V E -G 64 0C 13 51,-1.7 51,-1.3 -2,-0.3 2,-0.4 -0.984 15.4-145.6-159.7 152.2 -3.2 -3.4 3.3 14 14 A T E -G 63 0C 41 -2,-0.3 2,-0.8 49,-0.3 49,-0.3 -0.973 7.2-147.7-128.1 141.6 -0.3 -1.0 2.6 15 15 A F E -G 62 0C 0 47,-3.7 47,-1.4 -2,-0.4 2,-0.1 -0.839 23.5-152.4-108.5 93.6 2.6 -1.2 0.2 16 16 A H - 0 0 112 -2,-0.8 44,-0.1 45,-0.2 -2,-0.0 -0.386 4.7-155.0 -67.9 141.0 5.5 0.7 1.9 17 17 A V - 0 0 11 -2,-0.1 2,-2.8 2,-0.1 44,-0.2 -0.975 16.5-136.3-122.3 122.9 8.1 2.3 -0.4 18 18 A P + 0 0 99 0, 0.0 2,-1.0 0, 0.0 3,-0.1 -0.321 46.3 154.8 -74.0 61.6 11.7 3.0 0.8 19 19 A S - 0 0 21 -2,-2.8 4,-0.2 40,-0.2 -2,-0.1 -0.779 30.6-166.7 -95.8 97.4 11.8 6.4 -0.7 20 20 A N S S+ 0 0 163 -2,-1.0 -1,-0.2 2,-0.1 39,-0.0 0.790 79.9 52.6 -51.0 -28.9 14.3 8.5 1.2 21 21 A Q S S- 0 0 89 -3,-0.1 2,-0.1 38,-0.1 60,-0.1 -0.892 108.4 -90.2-113.4 142.1 12.8 11.5 -0.6 22 22 A P - 0 0 63 0, 0.0 2,-0.7 0, 0.0 37,-0.2 -0.258 45.1-123.6 -50.8 112.7 9.0 12.4 -0.7 23 23 A L + 0 0 3 35,-2.2 37,-0.2 1,-0.2 3,-0.2 -0.475 35.6 174.4 -64.9 108.1 7.7 10.7 -3.8 24 24 A K S S+ 0 0 139 -2,-0.7 17,-0.5 1,-0.3 2,-0.4 0.790 74.9 32.1 -84.7 -31.0 6.1 13.4 -5.9 25 25 A E S S+ 0 0 99 14,-0.1 2,-0.3 -3,-0.1 56,-0.3 -0.897 74.8 165.2-132.9 103.7 5.4 11.2 -8.8 26 26 A V E -B 38 0A 1 12,-0.5 12,-4.1 -2,-0.4 2,-0.4 -0.881 16.5-166.0-119.1 150.5 4.5 7.5 -8.1 27 27 A L E -BC 37 78A 29 51,-2.3 51,-2.2 -2,-0.3 2,-0.4 -0.904 4.3-165.5-140.8 110.1 2.9 4.9 -10.3 28 28 A W E -BC 36 77A 0 8,-1.9 7,-1.9 -2,-0.4 8,-1.3 -0.754 10.9-174.0 -96.2 139.5 1.5 1.6 -9.0 29 29 A K E -BC 34 76A 36 47,-2.3 47,-2.8 -2,-0.4 2,-0.4 -0.933 18.3-155.8-132.7 156.3 0.7 -1.3 -11.3 30 30 A K E > -BC 33 75A 29 3,-1.4 3,-1.2 -2,-0.3 45,-0.2 -0.878 63.5 -57.4-134.8 99.5 -0.9 -4.7 -11.0 31 31 A Q T 3 S- 0 0 99 43,-1.1 45,-0.1 -2,-0.4 -1,-0.1 -0.462 118.8 -17.5 67.3-133.0 0.1 -7.3 -13.7 32 32 A K T 3 S+ 0 0 214 -2,-0.2 -1,-0.2 -3,-0.1 2,-0.2 0.072 129.1 74.8 -92.9 24.8 -0.6 -6.0 -17.2 33 33 A D E < S-B 30 0A 98 -3,-1.2 -3,-1.4 13,-0.0 2,-0.4 -0.721 80.6-108.3-127.2 177.7 -3.0 -3.3 -15.7 34 34 A K E +B 29 0A 69 -5,-0.2 -5,-0.2 -2,-0.2 15,-0.2 -0.906 25.7 174.3-113.9 138.9 -2.8 -0.0 -13.8 35 35 A V E - 0 0 0 -7,-1.9 11,-2.2 -2,-0.4 2,-0.3 0.841 62.2 -19.3-103.0 -64.1 -3.7 0.5 -10.2 36 36 A A E -BD 28 45A 0 -8,-1.3 -8,-1.9 9,-0.3 -1,-0.4 -0.947 48.3-162.4-146.0 165.3 -2.8 4.1 -9.2 37 37 A E E -BD 27 44A 53 7,-1.9 7,-1.4 -2,-0.3 2,-0.4 -0.905 4.5-160.0-156.8 124.3 -0.7 7.0 -10.2 38 38 A L E +BD 26 43A 5 -12,-4.1 -12,-0.5 -2,-0.3 2,-0.3 -0.890 28.9 139.9-107.9 133.0 0.5 10.2 -8.4 39 39 A E E > + D 0 42A 86 3,-2.4 3,-1.8 -2,-0.4 -14,-0.1 -0.951 57.2 17.7-168.5 148.4 1.6 13.3 -10.2 40 40 A N T 3 S- 0 0 143 1,-0.3 -15,-0.1 -2,-0.3 3,-0.1 0.883 127.6 -62.0 53.3 41.5 1.4 17.1 -10.1 41 41 A S T 3 S+ 0 0 111 -17,-0.5 2,-0.4 1,-0.2 -1,-0.3 0.761 117.6 116.4 57.0 24.7 0.3 16.8 -6.5 42 42 A E E < -D 39 0A 96 -3,-1.8 -3,-2.4 2,-0.0 2,-0.4 -0.983 51.3-158.2-130.0 123.6 -2.7 14.9 -7.8 43 43 A F E +D 38 0A 61 -2,-0.4 2,-0.3 -5,-0.2 -5,-0.2 -0.791 19.3 163.1-100.8 141.1 -3.5 11.3 -7.0 44 44 A R E -D 37 0A 157 -7,-1.4 -7,-1.9 -2,-0.4 2,-0.1 -0.956 21.3-147.9-159.1 137.4 -5.7 9.1 -9.2 45 45 A A E -D 36 0A 9 -2,-0.3 -9,-0.3 -9,-0.2 2,-0.2 -0.398 21.1-116.1 -98.4 177.1 -6.4 5.4 -9.6 46 46 A F S >> S- 0 0 63 -11,-2.2 3,-2.8 -12,-0.2 2,-0.7 -0.725 71.7 -11.8-114.2 165.0 -7.4 3.4 -12.7 47 47 A S T 34 S- 0 0 95 1,-0.3 -12,-0.1 -2,-0.2 -2,-0.1 -0.285 129.1 -35.9 51.5 -97.2 -10.5 1.4 -13.7 48 48 A S T >4 S+ 0 0 75 -2,-0.7 3,-0.8 2,-0.1 -1,-0.3 0.162 112.0 102.6-140.7 15.5 -12.3 1.2 -10.4 49 49 A F G X4 + 0 0 33 -3,-2.8 3,-3.5 1,-0.2 16,-0.2 0.821 67.5 75.1 -70.4 -31.7 -9.4 0.9 -7.9 50 50 A K G >< S+ 0 0 89 -4,-0.5 3,-0.6 1,-0.3 -1,-0.2 0.783 93.7 53.8 -50.7 -29.3 -9.8 4.6 -7.0 51 51 A N G < S+ 0 0 120 -3,-0.8 -1,-0.3 1,-0.2 -2,-0.2 0.292 119.7 32.6 -90.0 9.8 -12.9 3.5 -5.0 52 52 A R G < S+ 0 0 117 -3,-3.5 13,-3.3 11,-0.0 2,-0.3 0.046 105.3 82.8-152.4 28.8 -10.8 0.9 -3.1 53 53 A V E < -H 64 0C 9 -3,-0.6 11,-0.2 11,-0.3 2,-0.1 -0.952 46.3-167.3-137.4 156.7 -7.4 2.5 -2.8 54 54 A Y E -H 63 0C 157 9,-1.8 9,-0.7 -2,-0.3 2,-0.3 -0.566 14.5-171.6-144.8 74.5 -5.6 4.9 -0.6 55 55 A L E -H 62 0C 12 7,-0.2 7,-0.3 -2,-0.1 6,-0.1 -0.536 22.8-127.1 -72.5 127.7 -2.2 6.0 -2.0 56 56 A D - 0 0 57 5,-3.6 -1,-0.1 -2,-0.3 -2,-0.0 -0.198 3.3-140.6 -68.9 164.3 -0.2 8.1 0.4 57 57 A T S S+ 0 0 86 2,-0.1 -1,-0.1 3,-0.0 -2,-0.0 -0.169 88.2 45.4-120.0 38.1 1.2 11.5 -0.6 58 58 A K S S+ 0 0 123 3,-0.1 -35,-2.2 -36,-0.0 -2,-0.0 0.419 122.3 16.0-137.0 -74.7 4.7 11.2 1.0 59 59 A S S S- 0 0 44 -37,-0.2 -40,-0.2 2,-0.1 3,-0.1 0.422 99.8-114.2 -89.4 -0.7 6.6 8.0 0.6 60 60 A G + 0 0 0 1,-0.2 -45,-0.1 -37,-0.2 -22,-0.1 0.472 59.9 161.8 81.0 0.8 4.4 7.0 -2.3 61 61 A S - 0 0 12 -44,-0.2 -5,-3.6 -6,-0.1 2,-0.4 -0.238 29.9-141.7 -55.7 139.8 3.1 4.0 -0.3 62 62 A L E -GH 15 55C 0 -47,-1.4 -47,-3.7 -7,-0.3 2,-0.6 -0.910 11.6-164.1-111.0 132.9 -0.1 2.6 -1.6 63 63 A T E -GH 14 54C 24 -9,-0.7 -9,-1.8 -2,-0.4 -49,-0.3 -0.911 9.7-158.5-119.6 105.8 -2.9 1.3 0.7 64 64 A I E -GH 13 53C 0 -51,-1.3 -51,-1.7 -2,-0.6 2,-0.3 -0.434 5.2-153.9 -80.1 155.1 -5.5 -0.9 -0.9 65 65 A Y E +G 12 0C 100 -13,-3.3 -53,-0.2 1,-0.3 -54,-0.1 -0.965 63.0 13.6-131.3 146.8 -9.0 -1.4 0.5 66 66 A N S S- 0 0 62 -55,-0.8 -1,-0.3 -2,-0.3 -54,-0.1 0.974 78.7-154.0 53.5 83.0 -11.5 -4.2 0.3 67 67 A L B -f 9 0B 4 -59,-0.6 -57,-1.8 -56,-0.5 2,-0.2 -0.441 14.7-174.9 -86.1 161.7 -9.4 -7.0 -1.2 68 68 A T - 0 0 52 -59,-0.2 4,-0.3 -2,-0.1 3,-0.1 -0.645 46.4 -83.4-136.5-166.9 -10.6 -10.0 -3.2 69 69 A S S S+ 0 0 99 1,-0.2 3,-0.4 -2,-0.2 23,-0.2 0.719 127.5 54.6 -78.8 -20.4 -9.2 -13.1 -4.8 70 70 A S S S+ 0 0 80 1,-0.2 -1,-0.2 3,-0.0 -3,-0.0 0.708 92.8 70.4 -83.4 -21.8 -8.0 -11.1 -7.8 71 71 A D S S+ 0 0 12 1,-0.2 2,-2.6 -3,-0.1 -1,-0.2 0.726 72.9 95.9 -67.0 -20.3 -6.1 -8.8 -5.5 72 72 A E + 0 0 87 -3,-0.4 2,-0.3 -4,-0.3 -1,-0.2 -0.432 64.7 110.2 -72.6 74.6 -3.7 -11.6 -4.8 73 73 A D S S- 0 0 35 -2,-2.6 17,-1.8 15,-0.1 2,-0.8 -0.940 77.8 -90.2-144.6 165.0 -1.2 -10.6 -7.5 74 74 A E E - E 0 89A 60 -2,-0.3 -43,-1.1 15,-0.2 15,-0.2 -0.694 43.9-159.1 -82.6 110.3 2.3 -9.1 -7.8 75 75 A Y E -CE 30 88A 0 13,-1.9 13,-0.6 -2,-0.8 2,-0.4 -0.596 2.8-157.6 -89.6 150.7 2.1 -5.3 -7.9 76 76 A E E -CE 29 87A 40 -47,-2.8 -47,-2.3 11,-0.3 2,-0.3 -0.990 3.0-160.4-133.3 126.6 4.8 -3.1 -9.3 77 77 A M E -CE 28 86A 0 9,-1.8 9,-1.5 -2,-0.4 2,-0.4 -0.738 3.3-163.2-105.0 154.0 5.4 0.6 -8.5 78 78 A E E +CE 27 85A 81 -51,-2.2 -51,-2.3 -2,-0.3 7,-0.2 -0.999 12.0 167.6-138.4 138.5 7.4 3.2 -10.5 79 79 A S - 0 0 12 5,-0.6 -53,-0.2 -2,-0.4 -2,-0.0 -0.986 37.7-133.6-152.1 139.5 8.8 6.6 -9.5 80 80 A P S S+ 0 0 89 0, 0.0 -1,-0.1 0, 0.0 -54,-0.1 0.906 114.0 44.8 -56.8 -43.9 11.3 9.1 -11.0 81 81 A N S S+ 0 0 78 -56,-0.3 -55,-0.1 -3,-0.1 -58,-0.0 0.830 98.8 93.5 -69.7 -32.4 13.1 9.4 -7.7 82 82 A I S S- 0 0 22 2,-0.1 -63,-0.1 1,-0.1 -4,-0.0 -0.162 90.4-114.7 -59.4 155.2 13.0 5.7 -7.3 83 83 A T S S- 0 0 141 -5,-0.0 -1,-0.1 1,-0.0 -5,-0.0 0.895 80.6 -57.2 -58.9 -42.6 16.0 3.7 -8.5 84 84 A D S S- 0 0 132 -7,-0.1 -5,-0.6 0, 0.0 2,-0.3 0.044 95.3 -37.1-162.8 -74.3 13.9 2.0 -11.1 85 85 A S E - E 0 78A 41 -7,-0.2 2,-0.3 2,-0.0 -7,-0.2 -0.889 44.9-145.1-172.3 139.7 10.8 0.0 -10.0 86 86 A M E - E 0 77A 24 -9,-1.5 -9,-1.8 -2,-0.3 2,-0.4 -0.721 6.8-145.7-110.3 160.9 9.7 -2.2 -7.2 87 87 A K E - E 0 76A 79 -86,-0.3 -84,-1.2 -11,-0.3 2,-0.8 -0.813 12.7-172.3-130.3 92.8 7.5 -5.2 -7.1 88 88 A F E -aE 3 75A 7 -13,-0.6 -13,-1.9 -2,-0.4 2,-0.2 -0.754 18.6-143.5 -88.3 110.6 5.4 -5.6 -3.9 89 89 A F E -aE 4 74A 69 -86,-2.8 -84,-3.7 -2,-0.8 2,-0.4 -0.535 11.3-153.8 -76.0 136.2 3.6 -9.0 -3.9 90 90 A L E -a 5 0A 0 -17,-1.8 2,-0.5 -2,-0.2 -84,-0.2 -0.938 6.4-165.2-115.2 132.0 0.1 -9.1 -2.5 91 91 A Y E -a 6 0A 98 -86,-1.4 -84,-3.3 -2,-0.4 2,-0.5 -0.963 8.6-150.5-119.4 122.4 -1.5 -12.2 -1.0 92 92 A V E +a 7 0A 33 -2,-0.5 -84,-0.3 -23,-0.2 2,-0.2 -0.790 22.6 174.0 -94.6 127.5 -5.2 -12.4 -0.3 93 93 A G E -a 8 0A 30 -86,-1.2 -84,-2.7 -2,-0.5 -26,-0.1 -0.714 39.8-125.2-124.2 175.6 -6.4 -14.5 2.5 94 94 A E 0 0 190 1,-0.3 -1,-0.1 -2,-0.2 -86,-0.1 0.832 360.0 360.0 -88.5 -38.0 -9.6 -15.4 4.4 95 95 A S 0 0 167 -88,-0.1 -1,-0.3 -87,-0.0 -87,-0.0 -0.751 360.0 360.0-179.8 360.0 -8.3 -14.6 7.8